RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 TRAF7Q6Q0C0 670 aa7.59□□□□□ -1.19
XPA-204ENST00000496104 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
XPA-204ENST00000496104 EEA1Q15075 1411 aa7.59□□□□□ -1.19
XPA-204ENST00000496104 APBA3O96018 575 aa7.58□□□□□ -1.2
XPA-204ENST00000496104 ERBINQ96RT1 1412 aa7.58□□□□□ -1.2
XPA-204ENST00000496104 ITGBL1O95965 494 aaPredicted RBP7.57□□□□□ -1.2
XPA-204ENST00000496104 LAPTM4AQ15012 233 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
XPA-204ENST00000496104 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 STK24Q9Y6E0 443 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 ABCC5O15440 1437 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 WDR90Q96KV7 1748 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
XPA-204ENST00000496104 SPATA31A3Q5VYP0 1347 aa7.56□□□□□ -1.2
XPA-204ENST00000496104 PRAG1Q86YV5 1406 aa7.56□□□□□ -1.2
XPA-204ENST00000496104 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
XPA-204ENST00000496104 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
XPA-204ENST00000496104 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
XPA-204ENST00000496104 CDC42BPGQ6DT37 1551 aa7.55□□□□□ -1.2
XPA-204ENST00000496104 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
XPA-204ENST00000496104 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
XPA-204ENST00000496104 SPATA31A5Q5VU36 1347 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 NPHP3Q7Z494 1330 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 SPATA31A7Q8IWB4 1347 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 NBPF8Q3BBV2 869 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
XPA-204ENST00000496104 KIF15Q9NS87 1388 aa7.54□□□□□ -1.2
XPA-204ENST00000496104 IQGAP3Q86VI3 1631 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 COL24A1Q17RW2 1714 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 CRYBG1Q9Y4K1 1723 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 FOXO3O43524 673 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 TBC1D12O60347 775 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 GFRA3O60609 400 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 YBX3P16989 372 aaKnown RBP eCLIP7.53□□□□□ -1.2
XPA-204ENST00000496104 HTRA3P83110 453 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 MYT1Q01538 1121 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 BCL2L12Q9HB09 334 aa7.53□□□□□ -1.2
XPA-204ENST00000496104 PTF1AQ7RTS3 328 aa7.52□□□□□ -1.21
XPA-204ENST00000496104 PLPP6Q8IY26 295 aa7.52□□□□□ -1.21
XPA-204ENST00000496104 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.21
XPA-204ENST00000496104 COL14A1Q05707 1796 aaKnown RBP7.51□□□□□ -1.21
XPA-204ENST00000496104 SBF2Q86WG5 1849 aa7.51□□□□□ -1.21
XPA-204ENST00000496104 STK25O00506 426 aa7.51□□□□□ -1.21
XPA-204ENST00000496104 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
XPA-204ENST00000496104 PAPPAQ13219 1627 aa7.51□□□□□ -1.21
XPA-204ENST00000496104 TNS3Q68CZ2 1445 aa7.51□□□□□ -1.21
XPA-204ENST00000496104 TSPY4P0CV99 314 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 TSPY10P0CW01 314 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 APLP1P51693 650 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 FOXK1P85037 733 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 ZNF454Q8N9F8 522 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.5□□□□□ -1.21
XPA-204ENST00000496104 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
XPA-204ENST00000496104 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
XPA-204ENST00000496104 KIAA1210Q9ULL0 1709 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 PTPREP23469 700 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 GPR162Q16538 588 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 FAM161AQ3B820 660 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 NLGN2Q8NFZ4 835 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 KLRG1Q96E93 195 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 NBPF3Q9H094 633 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 TECPR2O15040 1411 aa7.49□□□□□ -1.21
XPA-204ENST00000496104 E9PCH4 1651 aa7.48□□□□□ -1.21
XPA-204ENST00000496104 PPP1R37O75864 691 aa7.48□□□□□ -1.21
XPA-204ENST00000496104 ESCO1Q5FWF5 840 aa7.48□□□□□ -1.21
XPA-204ENST00000496104 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
XPA-204ENST00000496104 BTG4Q9NY30 223 aa7.48□□□□□ -1.21
XPA-204ENST00000496104 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
XPA-204ENST00000496104 PHRF1Q9P1Y6 1649 aaKnown RBP7.48□□□□□ -1.21
XPA-204ENST00000496104 SPATA31A1Q5TZJ5 1347 aa7.48□□□□□ -1.21
XPA-204ENST00000496104 KIF1AQ12756 1690 aa7.47□□□□□ -1.21
XPA-204ENST00000496104 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
XPA-204ENST00000496104 MTFR1LQ9H019 292 aa7.47□□□□□ -1.21
XPA-204ENST00000496104 TRPM3Q9HCF6 1732 aaPredicted RBP7.47□□□□□ -1.21
XPA-204ENST00000496104 FMN2Q9NZ56 1722 aa7.47□□□□□ -1.21
XPA-204ENST00000496104 CCDC144AA2RUR9 1427 aa7.46□□□□□ -1.21
XPA-204ENST00000496104 UBTFP17480 764 aaKnown RBP7.46□□□□□ -1.22
XPA-204ENST00000496104 KCNC4Q03721 635 aa7.46□□□□□ -1.22
XPA-204ENST00000496104 ZNF787Q6DD87 383 aa7.46□□□□□ -1.22
XPA-204ENST00000496104 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.22
XPA-204ENST00000496104 ALS2Q96Q42 1657 aa7.46□□□□□ -1.22
XPA-204ENST00000496104 KANK1Q14678 1352 aa7.46□□□□□ -1.22
XPA-204ENST00000496104 ARHGEF28Q8N1W1 1705 aaKnown RBP7.45□□□□□ -1.22
XPA-204ENST00000496104 PARP4Q9UKK3 1724 aaKnown RBP7.45□□□□□ -1.22
XPA-204ENST00000496104 HDGFP51858 240 aaKnown RBP7.45□□□□□ -1.22
XPA-204ENST00000496104 ZNF775Q96BV0 537 aaPredicted RBP7.45□□□□□ -1.22
XPA-204ENST00000496104 RRP7BPQ9NSQ0 103 aa7.45□□□□□ -1.22
XPA-204ENST00000496104 RGPD8O14715 1765 aaPredicted RBP7.44□□□□□ -1.22
XPA-204ENST00000496104 DSG2Q14126 1118 aa7.44□□□□□ -1.22
XPA-204ENST00000496104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
XPA-204ENST00000496104 ANKK1Q8NFD2 765 aa7.44□□□□□ -1.22
XPA-204ENST00000496104 GPHNQ9NQX3 736 aaPredicted RBP7.44□□□□□ -1.22
XPA-204ENST00000496104 NAIPQ13075 1403 aa7.44□□□□□ -1.22
XPA-204ENST00000496104 LRRC37A3O60309 1634 aa7.43□□□□□ -1.22
XPA-204ENST00000496104 PLSCR1O15162 318 aa7.43□□□□□ -1.22
XPA-204ENST00000496104 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
XPA-204ENST00000496104 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
XPA-204ENST00000496104 BCAMP50895 628 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms