RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
MRPL55-233ENST00000495899 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
MRPL55-233ENST00000495899 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-233ENST00000495899 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
MRPL55-233ENST00000495899 BCL9O00512 1426 aa16.87■□□□□ 0.29
MRPL55-233ENST00000495899 TRIM37O94972 964 aa16.86■□□□□ 0.29
MRPL55-233ENST00000495899 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-233ENST00000495899 BAG6P46379 1132 aa16.86■□□□□ 0.29
MRPL55-233ENST00000495899 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
MRPL55-233ENST00000495899 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
MRPL55-233ENST00000495899 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
MRPL55-233ENST00000495899 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
MRPL55-233ENST00000495899 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
MRPL55-233ENST00000495899 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
MRPL55-233ENST00000495899 PEAK1Q9H792 1746 aa16.83■□□□□ 0.28
MRPL55-233ENST00000495899 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
MRPL55-233ENST00000495899 APBA3O96018 575 aa16.81■□□□□ 0.28
MRPL55-233ENST00000495899 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
MRPL55-233ENST00000495899 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-233ENST00000495899 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
MRPL55-233ENST00000495899 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-233ENST00000495899 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
MRPL55-233ENST00000495899 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
MRPL55-233ENST00000495899 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
MRPL55-233ENST00000495899 EYA1Q99502 592 aa16.8■□□□□ 0.28
MRPL55-233ENST00000495899 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
MRPL55-233ENST00000495899 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-233ENST00000495899 PROM2Q8N271 834 aa16.79■□□□□ 0.28
MRPL55-233ENST00000495899 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
MRPL55-233ENST00000495899 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
MRPL55-233ENST00000495899 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
MRPL55-233ENST00000495899 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
MRPL55-233ENST00000495899 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
MRPL55-233ENST00000495899 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
MRPL55-233ENST00000495899 CAMKK2Q96RR4 588 aa16.78■□□□□ 0.28
MRPL55-233ENST00000495899 MEGF6O75095 1541 aa16.77■□□□□ 0.28
MRPL55-233ENST00000495899 PLSCR1O15162 318 aa16.77■□□□□ 0.28
MRPL55-233ENST00000495899 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
MRPL55-233ENST00000495899 MTHFSP49914 203 aa16.76■□□□□ 0.27
MRPL55-233ENST00000495899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.27
MRPL55-233ENST00000495899 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
MRPL55-233ENST00000495899 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
MRPL55-233ENST00000495899 IGSF1Q8N6C5 1336 aa16.74■□□□□ 0.27
MRPL55-233ENST00000495899 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
MRPL55-233ENST00000495899 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
MRPL55-233ENST00000495899 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
MRPL55-233ENST00000495899 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
MRPL55-233ENST00000495899 IL13P35225 146 aa16.73■□□□□ 0.27
MRPL55-233ENST00000495899 PTF1AQ7RTS3 328 aa16.73■□□□□ 0.27
MRPL55-233ENST00000495899 KCNQ2O43526 872 aa16.72■□□□□ 0.27
MRPL55-233ENST00000495899 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
MRPL55-233ENST00000495899 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
MRPL55-233ENST00000495899 CYP27B1O15528 508 aa16.69■□□□□ 0.26
MRPL55-233ENST00000495899 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
MRPL55-233ENST00000495899 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-233ENST00000495899 NKX1-1Q15270 411 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-233ENST00000495899 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
MRPL55-233ENST00000495899 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
MRPL55-233ENST00000495899 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
MRPL55-233ENST00000495899 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
MRPL55-233ENST00000495899 KDRP35968 1356 aa16.67■□□□□ 0.26
MRPL55-233ENST00000495899 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-233ENST00000495899 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
MRPL55-233ENST00000495899 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
MRPL55-233ENST00000495899 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
MRPL55-233ENST00000495899 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
MRPL55-233ENST00000495899 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
MRPL55-233ENST00000495899 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-233ENST00000495899 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
MRPL55-233ENST00000495899 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
MRPL55-233ENST00000495899 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
MRPL55-233ENST00000495899 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
MRPL55-233ENST00000495899 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
MRPL55-233ENST00000495899 PHKG2P15735 406 aa16.64■□□□□ 0.25
MRPL55-233ENST00000495899 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-233ENST00000495899 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
MRPL55-233ENST00000495899 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
MRPL55-233ENST00000495899 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
MRPL55-233ENST00000495899 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
MRPL55-233ENST00000495899 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
MRPL55-233ENST00000495899 SLC27A3Q5K4L6 730 aa16.61■□□□□ 0.25
MRPL55-233ENST00000495899 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
MRPL55-233ENST00000495899 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
MRPL55-233ENST00000495899 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-233ENST00000495899 RREB1Q92766 1687 aa16.6■□□□□ 0.25
MRPL55-233ENST00000495899 PSDA5PKW4 1024 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-233ENST00000495899 HMOX1P09601 288 aa16.6■□□□□ 0.25
MRPL55-233ENST00000495899 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
MRPL55-233ENST00000495899 RALBP1Q15311 655 aa16.6■□□□□ 0.25
MRPL55-233ENST00000495899 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-233ENST00000495899 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
MRPL55-233ENST00000495899 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
MRPL55-233ENST00000495899 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
MRPL55-233ENST00000495899 C1orf141Q5JVX7 400 aa16.59■□□□□ 0.25
MRPL55-233ENST00000495899 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-233ENST00000495899 PIGBQ92521 554 aa16.57■□□□□ 0.24
MRPL55-233ENST00000495899 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
MRPL55-233ENST00000495899 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
MRPL55-233ENST00000495899 BTAF1O14981 1849 aa16.56■□□□□ 0.24
MRPL55-233ENST00000495899 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms