RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
PHF1-211ENST00000495509 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
PHF1-211ENST00000495509 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
PHF1-211ENST00000495509 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
PHF1-211ENST00000495509 NWD2Q9ULI1 1742 aa20.56■□□□□ 0.88
PHF1-211ENST00000495509 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
PHF1-211ENST00000495509 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
PHF1-211ENST00000495509 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
PHF1-211ENST00000495509 MCM10Q7L590 875 aa20.55■□□□□ 0.88
PHF1-211ENST00000495509 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
PHF1-211ENST00000495509 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
PHF1-211ENST00000495509 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
PHF1-211ENST00000495509 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
PHF1-211ENST00000495509 IL2RBP14784 551 aa20.54■□□□□ 0.88
PHF1-211ENST00000495509 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
PHF1-211ENST00000495509 USP21Q9UK80 565 aa20.53■□□□□ 0.88
PHF1-211ENST00000495509 CCDC9Q9Y3X0 531 aaKnown RBP20.52■□□□□ 0.88
PHF1-211ENST00000495509 SPATA31A1Q5TZJ5 1347 aa20.52■□□□□ 0.88
PHF1-211ENST00000495509 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 OVOS2A0A0G2JMS6 1433 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 AFF2P51816 1311 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
PHF1-211ENST00000495509 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.873e-6■■□□□ 13.2
PHF1-211ENST00000495509 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
PHF1-211ENST00000495509 DUSP27Q5VZP5 1158 aa20.5■□□□□ 0.87
PHF1-211ENST00000495509 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
PHF1-211ENST00000495509 E9PSI1 815 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
PHF1-211ENST00000495509 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 CYP27B1O15528 508 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 VPS72Q15906 364 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 C1orf141Q5JVX7 400 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
PHF1-211ENST00000495509 PARP4Q9UKK3 1724 aaKnown RBP20.48■□□□□ 0.87
PHF1-211ENST00000495509 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
PHF1-211ENST00000495509 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
PHF1-211ENST00000495509 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
PHF1-211ENST00000495509 DISP2A7MBM2 1401 aa20.47■□□□□ 0.87
PHF1-211ENST00000495509 IL16Q14005 1332 aa20.47■□□□□ 0.87
PHF1-211ENST00000495509 PHKG2P15735 406 aa20.46■□□□□ 0.87
PHF1-211ENST00000495509 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
PHF1-211ENST00000495509 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
PHF1-211ENST00000495509 THRAP3Q9Y2W1 955 aaKnown RBP20.45■□□□□ 0.86
PHF1-211ENST00000495509 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
PHF1-211ENST00000495509 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
PHF1-211ENST00000495509 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
PHF1-211ENST00000495509 VIRMAQ69YN4 1812 aaKnown RBP20.44■□□□□ 0.86
PHF1-211ENST00000495509 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
PHF1-211ENST00000495509 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
PHF1-211ENST00000495509 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
PHF1-211ENST00000495509 MIS18AQ9NYP9 233 aa20.44■□□□□ 0.86
PHF1-211ENST00000495509 SHANK3Q9BYB0 1731 aa20.43■□□□□ 0.86
PHF1-211ENST00000495509 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
PHF1-211ENST00000495509 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
PHF1-211ENST00000495509 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
PHF1-211ENST00000495509 WNK3Q9BYP7 1800 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
PHF1-211ENST00000495509 GNAI1P63096 354 aa20.41■□□□□ 0.86
PHF1-211ENST00000495509 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
PHF1-211ENST00000495509 EXOC5O00471 708 aa20.41■□□□□ 0.86
PHF1-211ENST00000495509 CHL1O00533 1208 aa20.4■□□□□ 0.86
PHF1-211ENST00000495509 GJD4Q96KN9 370 aaPredicted RBP20.4■□□□□ 0.86
PHF1-211ENST00000495509 CDCA7Q9BWT1 371 aaPredicted RBP20.4■□□□□ 0.86
PHF1-211ENST00000495509 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
PHF1-211ENST00000495509 KDM6AO15550 1401 aaPredicted RBP20.4■□□□□ 0.86
PHF1-211ENST00000495509 ATRNO75882 1429 aa20.39■□□□□ 0.85
PHF1-211ENST00000495509 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
PHF1-211ENST00000495509 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.85
PHF1-211ENST00000495509 LRRC37A3O60309 1634 aa20.39■□□□□ 0.85
PHF1-211ENST00000495509 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
PHF1-211ENST00000495509 EXOSC9Q06265 439 aaKnown RBP20.38■□□□□ 0.85
PHF1-211ENST00000495509 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
PHF1-211ENST00000495509 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
PHF1-211ENST00000495509 DDB1Q16531 1140 aa20.37■□□□□ 0.85
PHF1-211ENST00000495509 GLI3P10071 1580 aa20.37■□□□□ 0.85
PHF1-211ENST00000495509 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
PHF1-211ENST00000495509 TEFQ10587 303 aa20.36■□□□□ 0.85
PHF1-211ENST00000495509 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
PHF1-211ENST00000495509 TSPYL4Q9UJ04 414 aa20.36■□□□□ 0.85
PHF1-211ENST00000495509 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
PHF1-211ENST00000495509 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
PHF1-211ENST00000495509 RCAN3Q9UKA8 241 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 SUPT16HQ9Y5B9 1047 aaKnown RBP20.34■□□□□ 0.85
PHF1-211ENST00000495509 TNS2Q63HR2 1409 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 A0A0G2JS52 829 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 MYT1Q01538 1121 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 MARCH10Q8NA82 808 aaPredicted RBP20.34■□□□□ 0.85
PHF1-211ENST00000495509 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
PHF1-211ENST00000495509 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms