RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-214ENST00000495465 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 PANK3Q9H999 370 aa20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 PPP1R1BQ9UD71 204 aaPredicted RBP20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 KIF20BQ96Q89 1820 aa20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
RAPGEF3-214ENST00000495465 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
RAPGEF3-214ENST00000495465 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-214ENST00000495465 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
RAPGEF3-214ENST00000495465 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
RAPGEF3-214ENST00000495465 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
RAPGEF3-214ENST00000495465 POLKQ9UBT6 870 aa20.16■□□□□ 0.82
RAPGEF3-214ENST00000495465 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
RAPGEF3-214ENST00000495465 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
RAPGEF3-214ENST00000495465 KCNQ4P56696 695 aa20.13■□□□□ 0.81
RAPGEF3-214ENST00000495465 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
RAPGEF3-214ENST00000495465 BTAF1O14981 1849 aa20.13■□□□□ 0.81
RAPGEF3-214ENST00000495465 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
RAPGEF3-214ENST00000495465 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
RAPGEF3-214ENST00000495465 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
RAPGEF3-214ENST00000495465 EYA1Q99502 592 aa20.11■□□□□ 0.81
RAPGEF3-214ENST00000495465 NSD2O96028 1365 aa20.1■□□□□ 0.81
RAPGEF3-214ENST00000495465 CYP27B1O15528 508 aa20.1■□□□□ 0.81
RAPGEF3-214ENST00000495465 PTGER2P43116 358 aa20.09■□□□□ 0.81
RAPGEF3-214ENST00000495465 EIF4A2Q14240 407 aaKnown RBP20.08■□□□□ 0.81
RAPGEF3-214ENST00000495465 MORC1Q86VD1 984 aa20.08■□□□□ 0.81
RAPGEF3-214ENST00000495465 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
RAPGEF3-214ENST00000495465 CASZ1Q86V15 1759 aa20.08■□□□□ 0.8
RAPGEF3-214ENST00000495465 MPRIPQ6WCQ1 1025 aa20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 AKT1S1Q96B36 256 aa20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 CCNL1Q9UK58 526 aaPredicted RBP20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 KNSTRNQ9Y448 316 aa20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
RAPGEF3-214ENST00000495465 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
RAPGEF3-214ENST00000495465 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
RAPGEF3-214ENST00000495465 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
RAPGEF3-214ENST00000495465 PAPPAQ13219 1627 aa20.04■□□□□ 0.8
RAPGEF3-214ENST00000495465 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
RAPGEF3-214ENST00000495465 NCAPD2Q15021 1401 aa20.03■□□□□ 0.8
RAPGEF3-214ENST00000495465 DCAF8L1A6NGE4 600 aa20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 NKX1-1Q15270 411 aaPredicted RBP20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 SGIP1Q9BQI5 828 aa20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 PNPLA7Q6ZV29 1317 aa20.01■□□□□ 0.79
RAPGEF3-214ENST00000495465 PIGBQ92521 554 aa20■□□□□ 0.79
RAPGEF3-214ENST00000495465 FHDC1Q9C0D6 1143 aaPredicted RBP20■□□□□ 0.79
RAPGEF3-214ENST00000495465 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
RAPGEF3-214ENST00000495465 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
RAPGEF3-214ENST00000495465 ARXQ96QS3 562 aa19.99■□□□□ 0.79
RAPGEF3-214ENST00000495465 PALLDQ8WX93 1383 aa19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 MSH5O43196 834 aa19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 PHKG2P15735 406 aa19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 SLC16A10Q8TF71 515 aa19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
RAPGEF3-214ENST00000495465 SYT17Q9BSW7 474 aa19.97■□□□□ 0.79
RAPGEF3-214ENST00000495465 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
RAPGEF3-214ENST00000495465 POLD1P28340 1107 aa19.95■□□□□ 0.78
RAPGEF3-214ENST00000495465 PKD1L3Q7Z443 1732 aa19.95■□□□□ 0.78
RAPGEF3-214ENST00000495465 LY75O60449 1722 aa19.94■□□□□ 0.78
RAPGEF3-214ENST00000495465 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF3-214ENST00000495465 COL23A1Q86Y22 540 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF3-214ENST00000495465 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
RAPGEF3-214ENST00000495465 UTRNP46939 3433 aa19.93■□□□□ 0.78
RAPGEF3-214ENST00000495465 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
RAPGEF3-214ENST00000495465 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
RAPGEF3-214ENST00000495465 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
RAPGEF3-214ENST00000495465 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
RAPGEF3-214ENST00000495465 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
RAPGEF3-214ENST00000495465 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
RAPGEF3-214ENST00000495465 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
RAPGEF3-214ENST00000495465 TOGARAM1Q9Y4F4 1720 aa19.91■□□□□ 0.78
RAPGEF3-214ENST00000495465 YY1P25490 414 aa19.91■□□□□ 0.78
RAPGEF3-214ENST00000495465 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
RAPGEF3-214ENST00000495465 IL13P35225 146 aa19.91■□□□□ 0.78
RAPGEF3-214ENST00000495465 MTHFSP49914 203 aa19.91■□□□□ 0.78
RAPGEF3-214ENST00000495465 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
RAPGEF3-214ENST00000495465 SIK1P57059 783 aa19.9■□□□□ 0.78
RAPGEF3-214ENST00000495465 AMOTQ4VCS5 1084 aa19.9■□□□□ 0.78
RAPGEF3-214ENST00000495465 AK7Q96M32 723 aa19.9■□□□□ 0.78
RAPGEF3-214ENST00000495465 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
RAPGEF3-214ENST00000495465 MSL1Q68DK7 614 aa19.89■□□□□ 0.77
RAPGEF3-214ENST00000495465 ATG3Q9NT62 314 aa19.89■□□□□ 0.77
RAPGEF3-214ENST00000495465 GOLGB1Q14789 3259 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-214ENST00000495465 PLEKHG2Q9H7P9 1386 aa19.88■□□□□ 0.77
RAPGEF3-214ENST00000495465 ERVV-2B6SEH9 535 aa19.88■□□□□ 0.77
RAPGEF3-214ENST00000495465 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
RAPGEF3-214ENST00000495465 DCAF5Q96JK2 942 aa19.88■□□□□ 0.77
RAPGEF3-214ENST00000495465 C1orf141Q5JVX7 400 aa19.87■□□□□ 0.77
RAPGEF3-214ENST00000495465 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
RAPGEF3-214ENST00000495465 LINC00116Q8NCU8 138 aa19.87■□□□□ 0.77
RAPGEF3-214ENST00000495465 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
RAPGEF3-214ENST00000495465 ITGB4P16144 1822 aa19.87■□□□□ 0.77
RAPGEF3-214ENST00000495465 PHF14O94880 888 aa19.86■□□□□ 0.77
RAPGEF3-214ENST00000495465 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
RAPGEF3-214ENST00000495465 CABP4P57796 275 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms