RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 DDX54Q8TDD1 881 aaKnown RBP23.72■■□□□ 1.39
CTNS-207ENST00000495445 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
CTNS-207ENST00000495445 R3HDM1Q15032 1099 aaKnown RBP23.71■■□□□ 1.39
CTNS-207ENST00000495445 ACSBG1Q96GR2 724 aa23.71■■□□□ 1.39
CTNS-207ENST00000495445 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
CTNS-207ENST00000495445 NUP188Q5SRE5 1749 aa23.7■■□□□ 1.38
CTNS-207ENST00000495445 RAPGEF4Q8WZA2 1011 aa23.69■■□□□ 1.38
CTNS-207ENST00000495445 NHSQ6T4R5 1651 aa23.69■■□□□ 1.38
CTNS-207ENST00000495445 TATP17735 454 aaPredicted RBP23.68■■□□□ 1.38
CTNS-207ENST00000495445 NBPF14Q5TI25 921 aa23.68■■□□□ 1.38
CTNS-207ENST00000495445 MORC1Q86VD1 984 aa23.68■■□□□ 1.38
CTNS-207ENST00000495445 EYA1Q99502 592 aa23.68■■□□□ 1.38
CTNS-207ENST00000495445 SHANK3Q9BYB0 1731 aa23.67■■□□□ 1.38
CTNS-207ENST00000495445 EIF4A2Q14240 407 aaKnown RBP23.66■■□□□ 1.38
CTNS-207ENST00000495445 TXNRD1Q16881 649 aa23.66■■□□□ 1.38
CTNS-207ENST00000495445 PRIM1P49642 420 aaKnown RBP23.62■■□□□ 1.37
CTNS-207ENST00000495445 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
CTNS-207ENST00000495445 CYP27B1O15528 508 aa23.61■■□□□ 1.37
CTNS-207ENST00000495445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.61■■□□□ 1.37
CTNS-207ENST00000495445 ANO8Q9HCE9 1232 aaPredicted RBP23.6■■□□□ 1.37
CTNS-207ENST00000495445 BTAF1O14981 1849 aa23.6■■□□□ 1.37
CTNS-207ENST00000495445 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
CTNS-207ENST00000495445 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
CTNS-207ENST00000495445 LRP5O75197 1615 aa23.59■■□□□ 1.37
CTNS-207ENST00000495445 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
CTNS-207ENST00000495445 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.37
CTNS-207ENST00000495445 NKX1-1Q15270 411 aaPredicted RBP23.58■■□□□ 1.37
CTNS-207ENST00000495445 PLEKHG2Q9H7P9 1386 aa23.56■■□□□ 1.36
CTNS-207ENST00000495445 LRRC4BQ9NT99 713 aa23.56■■□□□ 1.36
CTNS-207ENST00000495445 SPG7Q9UQ90 795 aa23.56■■□□□ 1.36
CTNS-207ENST00000495445 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
CTNS-207ENST00000495445 SLC15A2Q16348 729 aa23.54■■□□□ 1.36
CTNS-207ENST00000495445 SYTL4Q96C24 671 aaPredicted RBP23.54■■□□□ 1.36
CTNS-207ENST00000495445 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
CTNS-207ENST00000495445 IL13P35225 146 aa23.53■■□□□ 1.36
CTNS-207ENST00000495445 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
CTNS-207ENST00000495445 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
CTNS-207ENST00000495445 MTHFSP49914 203 aa23.52■■□□□ 1.36
CTNS-207ENST00000495445 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
CTNS-207ENST00000495445 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
CTNS-207ENST00000495445 PHKG2P15735 406 aa23.49■■□□□ 1.35
CTNS-207ENST00000495445 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
CTNS-207ENST00000495445 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
CTNS-207ENST00000495445 AKT1S1Q96B36 256 aa23.47■■□□□ 1.35
CTNS-207ENST00000495445 KDRP35968 1356 aa23.47■■□□□ 1.35
CTNS-207ENST00000495445 LY75O60449 1722 aa23.46■■□□□ 1.35
CTNS-207ENST00000495445 CASZ1Q86V15 1759 aa23.46■■□□□ 1.35
CTNS-207ENST00000495445 AEBP1Q8IUX7 1158 aa23.46■■□□□ 1.35
CTNS-207ENST00000495445 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
CTNS-207ENST00000495445 PLEKHO1Q53GL0 409 aaPredicted RBP23.45■■□□□ 1.34
CTNS-207ENST00000495445 MPRIPQ6WCQ1 1025 aa23.45■■□□□ 1.34
CTNS-207ENST00000495445 PIGBQ92521 554 aa23.45■■□□□ 1.34
CTNS-207ENST00000495445 SPON1Q9HCB6 807 aa23.45■■□□□ 1.34
CTNS-207ENST00000495445 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
CTNS-207ENST00000495445 AMOTQ4VCS5 1084 aa23.44■■□□□ 1.34
CTNS-207ENST00000495445 SULT6B1Q6IMI4 303 aa23.44■■□□□ 1.34
CTNS-207ENST00000495445 ITGB4P16144 1822 aa23.43■■□□□ 1.34
CTNS-207ENST00000495445 KCNQ4P56696 695 aa23.43■■□□□ 1.34
CTNS-207ENST00000495445 CCNL1Q9UK58 526 aaPredicted RBP23.41■■□□□ 1.34
CTNS-207ENST00000495445 DIAPH1O60610 1272 aaKnown RBP23.4■■□□□ 1.34
CTNS-207ENST00000495445 SMARCC1Q92922 1105 aaPredicted RBP23.4■■□□□ 1.34
CTNS-207ENST00000495445 ERVV-2B6SEH9 535 aa23.39■■□□□ 1.33
CTNS-207ENST00000495445 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.33
CTNS-207ENST00000495445 DCAF5Q96JK2 942 aa23.39■■□□□ 1.33
CTNS-207ENST00000495445 PTGER2P43116 358 aa23.38■■□□□ 1.33
CTNS-207ENST00000495445 PALLDQ8WX93 1383 aa23.38■■□□□ 1.33
CTNS-207ENST00000495445 ZBTB7AO95365 584 aa23.37■■□□□ 1.33
CTNS-207ENST00000495445 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
CTNS-207ENST00000495445 TMOD3Q9NYL9 352 aa23.37■■□□□ 1.33
CTNS-207ENST00000495445 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
CTNS-207ENST00000495445 HMGB2P26583 209 aaKnown RBP23.36■■□□□ 1.33
CTNS-207ENST00000495445 MTFR1LQ9H019 292 aa23.36■■□□□ 1.33
CTNS-207ENST00000495445 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
CTNS-207ENST00000495445 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
CTNS-207ENST00000495445 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
CTNS-207ENST00000495445 PNPLA7Q6ZV29 1317 aa23.34■■□□□ 1.33
CTNS-207ENST00000495445 QSER1Q2KHR3 1735 aa23.34■■□□□ 1.33
CTNS-207ENST00000495445 ATF5Q9Y2D1 282 aaPredicted RBP23.34■■□□□ 1.33
CTNS-207ENST00000495445 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.33
CTNS-207ENST00000495445 HMOX1P09601 288 aa23.33■■□□□ 1.33
CTNS-207ENST00000495445 SLC16A10Q8TF71 515 aa23.33■■□□□ 1.33
CTNS-207ENST00000495445 ATG3Q9NT62 314 aa23.33■■□□□ 1.33
CTNS-207ENST00000495445 TFCP2L1Q9NZI6 479 aa23.33■■□□□ 1.33
CTNS-207ENST00000495445 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
CTNS-207ENST00000495445 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
CTNS-207ENST00000495445 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
CTNS-207ENST00000495445 SIK1P57059 783 aa23.3■■□□□ 1.32
CTNS-207ENST00000495445 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
CTNS-207ENST00000495445 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
CTNS-207ENST00000495445 PPP1R1BQ9UD71 204 aaPredicted RBP23.29■■□□□ 1.32
CTNS-207ENST00000495445 CABP4P57796 275 aa23.28■■□□□ 1.32
CTNS-207ENST00000495445 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
CTNS-207ENST00000495445 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
CTNS-207ENST00000495445 C5P01031 1676 aa23.28■■□□□ 1.32
CTNS-207ENST00000495445 COL23A1Q86Y22 540 aaPredicted RBP23.27■■□□□ 1.32
CTNS-207ENST00000495445 NFATC2IPQ8NCF5 419 aa23.26■■□□□ 1.31
CTNS-207ENST00000495445 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
CTNS-207ENST00000495445 ITPK1Q13572 414 aa23.25■■□□□ 1.31
CTNS-207ENST00000495445 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
CTNS-207ENST00000495445 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms