RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.26
LMNA-215ENST00000495341 BTAF1O14981 1849 aa22.89■■□□□ 1.26
LMNA-215ENST00000495341 PDGFDQ9GZP0 370 aaPredicted RBP22.89■■□□□ 1.25
LMNA-215ENST00000495341 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
LMNA-215ENST00000495341 HSPA5P11021 654 aaKnown RBP22.88■■□□□ 1.25
LMNA-215ENST00000495341 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
LMNA-215ENST00000495341 CASZ1Q86V15 1759 aa22.87■■□□□ 1.25
LMNA-215ENST00000495341 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
LMNA-215ENST00000495341 ZBTB7AO95365 584 aa22.87■■□□□ 1.25
LMNA-215ENST00000495341 TATP17735 454 aaPredicted RBP22.87■■□□□ 1.25
LMNA-215ENST00000495341 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
LMNA-215ENST00000495341 KAT6BQ8WYB5 2073 aa22.84■■□□□ 1.25
LMNA-215ENST00000495341 DOT1LQ8TEK3 1739 aa22.84■■□□□ 1.25
LMNA-215ENST00000495341 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.25
LMNA-215ENST00000495341 ATF5Q9Y2D1 282 aaPredicted RBP22.83■■□□□ 1.25
LMNA-215ENST00000495341 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
LMNA-215ENST00000495341 LRRC4BQ9NT99 713 aa22.82■■□□□ 1.24
LMNA-215ENST00000495341 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
LMNA-215ENST00000495341 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
LMNA-215ENST00000495341 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
LMNA-215ENST00000495341 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
LMNA-215ENST00000495341 NSD2O96028 1365 aa22.79■■□□□ 1.24
LMNA-215ENST00000495341 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
LMNA-215ENST00000495341 MTFR1LQ9H019 292 aa22.78■■□□□ 1.24
LMNA-215ENST00000495341 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
LMNA-215ENST00000495341 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.23
LMNA-215ENST00000495341 PTGER2P43116 358 aa22.76■■□□□ 1.23
LMNA-215ENST00000495341 KCNQ4P56696 695 aa22.76■■□□□ 1.23
LMNA-215ENST00000495341 PANK3Q9H999 370 aa22.76■■□□□ 1.23
LMNA-215ENST00000495341 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
LMNA-215ENST00000495341 DCAF8L1A6NGE4 600 aa22.75■■□□□ 1.23
LMNA-215ENST00000495341 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
LMNA-215ENST00000495341 CCNL1Q9UK58 526 aaPredicted RBP22.74■■□□□ 1.23
LMNA-215ENST00000495341 EYA1Q99502 592 aa22.73■■□□□ 1.23
LMNA-215ENST00000495341 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
LMNA-215ENST00000495341 CYP27B1O15528 508 aa22.72■■□□□ 1.23
LMNA-215ENST00000495341 TFCP2L1Q9NZI6 479 aa22.72■■□□□ 1.23
LMNA-215ENST00000495341 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
LMNA-215ENST00000495341 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
LMNA-215ENST00000495341 MPRIPQ6WCQ1 1025 aa22.7■■□□□ 1.22
LMNA-215ENST00000495341 LY75O60449 1722 aa22.69■■□□□ 1.22
LMNA-215ENST00000495341 PKD1L3Q7Z443 1732 aa22.69■■□□□ 1.22
LMNA-215ENST00000495341 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
LMNA-215ENST00000495341 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
LMNA-215ENST00000495341 SGIP1Q9BQI5 828 aa22.68■■□□□ 1.22
LMNA-215ENST00000495341 FHDC1Q9C0D6 1143 aaPredicted RBP22.68■■□□□ 1.22
LMNA-215ENST00000495341 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
LMNA-215ENST00000495341 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
LMNA-215ENST00000495341 ARXQ96QS3 562 aa22.67■■□□□ 1.22
LMNA-215ENST00000495341 SLC16A10Q8TF71 515 aa22.66■■□□□ 1.22
LMNA-215ENST00000495341 KNSTRNQ9Y448 316 aa22.66■■□□□ 1.22
LMNA-215ENST00000495341 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
LMNA-215ENST00000495341 MSH5O43196 834 aa22.64■■□□□ 1.21
LMNA-215ENST00000495341 SYT17Q9BSW7 474 aa22.64■■□□□ 1.21
LMNA-215ENST00000495341 QSER1Q2KHR3 1735 aa22.64■■□□□ 1.21
LMNA-215ENST00000495341 YY1P25490 414 aa22.63■■□□□ 1.21
LMNA-215ENST00000495341 POLD1P28340 1107 aa22.63■■□□□ 1.21
LMNA-215ENST00000495341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.21
LMNA-215ENST00000495341 TUBGCP6Q96RT7 1819 aa22.62■■□□□ 1.21
LMNA-215ENST00000495341 NKX1-1Q15270 411 aaPredicted RBP22.62■■□□□ 1.21
LMNA-215ENST00000495341 IFNL2Q8IZJ0 200 aa22.62■■□□□ 1.21
LMNA-215ENST00000495341 SMARCC1Q92922 1105 aaPredicted RBP22.62■■□□□ 1.21
LMNA-215ENST00000495341 KIF7Q2M1P5 1343 aa22.61■■□□□ 1.21
LMNA-215ENST00000495341 IGSF1Q8N6C5 1336 aa22.61■■□□□ 1.21
LMNA-215ENST00000495341 KLHL34Q8N239 644 aa22.61■■□□□ 1.21
LMNA-215ENST00000495341 PIGBQ92521 554 aa22.61■■□□□ 1.21
LMNA-215ENST00000495341 PHKG2P15735 406 aa22.6■■□□□ 1.21
LMNA-215ENST00000495341 TMOD3Q9NYL9 352 aa22.6■■□□□ 1.21
LMNA-215ENST00000495341 C5P01031 1676 aa22.59■■□□□ 1.21
LMNA-215ENST00000495341 HMGB2P26583 209 aaKnown RBP22.59■■□□□ 1.21
LMNA-215ENST00000495341 ITGB4P16144 1822 aa22.57■■□□□ 1.2
LMNA-215ENST00000495341 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
LMNA-215ENST00000495341 MAP3K5Q99683 1374 aa22.56■■□□□ 1.2
LMNA-215ENST00000495341 PLEKHG2Q9H7P9 1386 aa22.56■■□□□ 1.2
LMNA-215ENST00000495341 AK7Q96M32 723 aa22.56■■□□□ 1.2
LMNA-215ENST00000495341 PLEKHO1Q53GL0 409 aaPredicted RBP22.54■■□□□ 1.2
LMNA-215ENST00000495341 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
LMNA-215ENST00000495341 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
LMNA-215ENST00000495341 LOC102724428A0A0B4J2F2 783 aa22.53■■□□□ 1.2
LMNA-215ENST00000495341 SIK1P57059 783 aa22.53■■□□□ 1.2
LMNA-215ENST00000495341 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
LMNA-215ENST00000495341 FLAD1Q8NFF5 587 aa22.53■■□□□ 1.2
LMNA-215ENST00000495341 ASAP1Q9ULH1 1129 aa22.53■■□□□ 1.2
LMNA-215ENST00000495341 C4BP0C0L5 1744 aa22.52■■□□□ 1.2
LMNA-215ENST00000495341 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
LMNA-215ENST00000495341 AEBP1Q8IUX7 1158 aa22.52■■□□□ 1.2
LMNA-215ENST00000495341 UTRNP46939 3433 aa22.51■■□□□ 1.19
LMNA-215ENST00000495341 PHF14O94880 888 aa22.51■■□□□ 1.19
LMNA-215ENST00000495341 AMOTQ4VCS5 1084 aa22.51■■□□□ 1.19
LMNA-215ENST00000495341 TAF1LQ8IZX4 1826 aa22.51■■□□□ 1.19
LMNA-215ENST00000495341 SULT6B1Q6IMI4 303 aa22.5■■□□□ 1.19
LMNA-215ENST00000495341 DCAF5Q96JK2 942 aa22.5■■□□□ 1.19
LMNA-215ENST00000495341 COL24A1Q17RW2 1714 aa22.5■■□□□ 1.19
LMNA-215ENST00000495341 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
LMNA-215ENST00000495341 LINC00116Q8NCU8 138 aa22.49■■□□□ 1.19
LMNA-215ENST00000495341 ERVV-2B6SEH9 535 aa22.48■■□□□ 1.19
LMNA-215ENST00000495341 IL13P35225 146 aa22.48■■□□□ 1.19
LMNA-215ENST00000495341 ATP6V1AP38606 617 aa22.48■■□□□ 1.19
LMNA-215ENST00000495341 GPR162Q16538 588 aa22.48■■□□□ 1.19
LMNA-215ENST00000495341 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms