RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
CCDC30-211ENST00000495044 KCNQ4P56696 695 aa10.46□□□□□ -0.74
CCDC30-211ENST00000495044 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
CCDC30-211ENST00000495044 SBNO2Q9Y2G9 1366 aa10.46□□□□□ -0.74
CCDC30-211ENST00000495044 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.74
CCDC30-211ENST00000495044 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
CCDC30-211ENST00000495044 ATP10DQ9P241 1426 aa10.45□□□□□ -0.74
CCDC30-211ENST00000495044 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
CCDC30-211ENST00000495044 C5P01031 1676 aa10.45□□□□□ -0.74
CCDC30-211ENST00000495044 YBX3P16989 372 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC30-211ENST00000495044 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
CCDC30-211ENST00000495044 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
CCDC30-211ENST00000495044 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 USP47Q96K76 1375 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 GPBP1L1Q9HC44 474 aaPredicted RBP10.43□□□□□ -0.74
CCDC30-211ENST00000495044 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 NSD2O96028 1365 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 IP6K1Q92551 441 aa10.43□□□□□ -0.74
CCDC30-211ENST00000495044 CEP350Q5VT06 3117 aa10.42□□□□□ -0.74
CCDC30-211ENST00000495044 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
CCDC30-211ENST00000495044 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
CCDC30-211ENST00000495044 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
CCDC30-211ENST00000495044 ZNF526Q8TF50 670 aaPredicted RBP10.41□□□□□ -0.74
CCDC30-211ENST00000495044 MEGF6O75095 1541 aa10.41□□□□□ -0.74
CCDC30-211ENST00000495044 HMGB2P26583 209 aaKnown RBP10.4□□□□□ -0.74
CCDC30-211ENST00000495044 AMPHP49418 695 aa10.4□□□□□ -0.74
CCDC30-211ENST00000495044 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
CCDC30-211ENST00000495044 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
CCDC30-211ENST00000495044 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
CCDC30-211ENST00000495044 HSPA6P17066 643 aa10.4□□□□□ -0.75
CCDC30-211ENST00000495044 COG3Q96JB2 828 aa10.4□□□□□ -0.75
CCDC30-211ENST00000495044 CD2APQ9Y5K6 639 aa10.4□□□□□ -0.75
CCDC30-211ENST00000495044 SIN3AQ96ST3 1273 aa10.39□□□□□ -0.75
CCDC30-211ENST00000495044 CARD11Q9BXL7 1154 aa10.39□□□□□ -0.75
CCDC30-211ENST00000495044 SMG6Q86US8 1419 aaKnown RBP10.39□□□□□ -0.75
CCDC30-211ENST00000495044 HOXC9P31274 260 aa10.38□□□□□ -0.75
CCDC30-211ENST00000495044 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
CCDC30-211ENST00000495044 ADCY9O60503 1353 aa10.38□□□□□ -0.75
CCDC30-211ENST00000495044 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
CCDC30-211ENST00000495044 POTEHQ6S545 545 aa10.38□□□□□ -0.75
CCDC30-211ENST00000495044 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
CCDC30-211ENST00000495044 C4BP0C0L5 1744 aa10.37□□□□□ -0.75
CCDC30-211ENST00000495044 CGNL1Q0VF96 1302 aa10.37□□□□□ -0.75
CCDC30-211ENST00000495044 RAPGEF4Q8WZA2 1011 aa10.37□□□□□ -0.75
CCDC30-211ENST00000495044 PALLDQ8WX93 1383 aa10.36□□□□□ -0.75
CCDC30-211ENST00000495044 PCDH11XQ9BZA7 1347 aa10.36□□□□□ -0.75
CCDC30-211ENST00000495044 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
CCDC30-211ENST00000495044 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
CCDC30-211ENST00000495044 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
CCDC30-211ENST00000495044 AK7Q96M32 723 aa10.36□□□□□ -0.75
CCDC30-211ENST00000495044 IGSF1Q8N6C5 1336 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
CCDC30-211ENST00000495044 USHBP1Q8N6Y0 703 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 WWC3Q9ULE0 1092 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 ITGB4P16144 1822 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
CCDC30-211ENST00000495044 PHF14O94880 888 aa10.34□□□□□ -0.75
CCDC30-211ENST00000495044 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
CCDC30-211ENST00000495044 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
CCDC30-211ENST00000495044 FBLN1P23142 703 aa10.33□□□□□ -0.76
CCDC30-211ENST00000495044 RRS1Q15050 365 aaKnown RBP10.33□□□□□ -0.76
CCDC30-211ENST00000495044 NBPF6Q5VWK0 638 aa10.33□□□□□ -0.76
CCDC30-211ENST00000495044 NBPF4Q96M43 638 aa10.33□□□□□ -0.76
CCDC30-211ENST00000495044 KIF20BQ96Q89 1820 aa10.33□□□□□ -0.76
CCDC30-211ENST00000495044 SMARCC1Q92922 1105 aaPredicted RBP10.33□□□□□ -0.76
CCDC30-211ENST00000495044 CICQ96RK0 1608 aaPredicted RBP10.32□□□□□ -0.76
CCDC30-211ENST00000495044 PKD1L3Q7Z443 1732 aa10.32□□□□□ -0.76
CCDC30-211ENST00000495044 APLP1P51693 650 aa10.31□□□□□ -0.76
CCDC30-211ENST00000495044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
CCDC30-211ENST00000495044 KIF3CO14782 793 aa10.3□□□□□ -0.76
CCDC30-211ENST00000495044 SSFA2P28290 1259 aa10.3□□□□□ -0.76
CCDC30-211ENST00000495044 FLT4P35916 1363 aa10.3□□□□□ -0.76
CCDC30-211ENST00000495044 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
CCDC30-211ENST00000495044 N4BP2Q86UW6 1770 aaPredicted RBP10.29□□□□□ -0.76
CCDC30-211ENST00000495044 INSRP06213 1382 aa10.29□□□□□ -0.76
CCDC30-211ENST00000495044 KIF13BQ9NQT8 1826 aa10.29□□□□□ -0.76
CCDC30-211ENST00000495044 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
CCDC30-211ENST00000495044 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
CCDC30-211ENST00000495044 GGNBP2Q9H3C7 697 aa10.29□□□□□ -0.76
CCDC30-211ENST00000495044 WDR90Q96KV7 1748 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 MAP2P11137 1827 aaKnown RBP10.28□□□□□ -0.76
CCDC30-211ENST00000495044 GNPATO15228 680 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 CYP27B1O15528 508 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 TOMM70O94826 608 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 HSP90AB2PQ58FF8 381 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 KIF24Q5T7B8 1368 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 SMIM5Q71RC9 77 aa10.28□□□□□ -0.76
CCDC30-211ENST00000495044 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 PXDNLA1KZ92 1463 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 LOC102724428A0A0B4J2F2 783 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 SIK1P57059 783 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 PIGBQ92521 554 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.77
CCDC30-211ENST00000495044 FYB1O15117 783 aa10.26□□□□□ -0.77
CCDC30-211ENST00000495044 MMP10P09238 476 aa10.26□□□□□ -0.77
CCDC30-211ENST00000495044 TESK2Q96S53 571 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms