RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
CDK11A-221ENST00000495016 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
CDK11A-221ENST00000495016 PTGER2P43116 358 aa16.08■□□□□ 0.16
CDK11A-221ENST00000495016 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
CDK11A-221ENST00000495016 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
CDK11A-221ENST00000495016 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
CDK11A-221ENST00000495016 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
CDK11A-221ENST00000495016 MEGF6O75095 1541 aa16.04■□□□□ 0.16
CDK11A-221ENST00000495016 PANK3Q9H999 370 aa16.04■□□□□ 0.16
CDK11A-221ENST00000495016 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
CDK11A-221ENST00000495016 LTN1O94822 1766 aa16.04■□□□□ 0.16
CDK11A-221ENST00000495016 SBF2Q86WG5 1849 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
CDK11A-221ENST00000495016 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 KCNQ4P56696 695 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
CDK11A-221ENST00000495016 CYP27B1O15528 508 aa16.02■□□□□ 0.16
CDK11A-221ENST00000495016 TNNT2P45379 298 aaPredicted RBP16.02■□□□□ 0.16
CDK11A-221ENST00000495016 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
CDK11A-221ENST00000495016 SGIP1Q9BQI5 828 aa16.02■□□□□ 0.16
CDK11A-221ENST00000495016 CCNL1Q9UK58 526 aaPredicted RBP16.02■□□□□ 0.16
CDK11A-221ENST00000495016 HMGB2P26583 209 aaKnown RBP16.01■□□□□ 0.15
CDK11A-221ENST00000495016 ARXQ96QS3 562 aa16.01■□□□□ 0.15
CDK11A-221ENST00000495016 EYA1Q99502 592 aa16.01■□□□□ 0.15
CDK11A-221ENST00000495016 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
CDK11A-221ENST00000495016 NSD2O96028 1365 aa16■□□□□ 0.15
CDK11A-221ENST00000495016 SYT17Q9BSW7 474 aa16■□□□□ 0.15
CDK11A-221ENST00000495016 FHDC1Q9C0D6 1143 aaPredicted RBP16■□□□□ 0.15
CDK11A-221ENST00000495016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
CDK11A-221ENST00000495016 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
CDK11A-221ENST00000495016 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CDK11A-221ENST00000495016 YY1P25490 414 aa15.98■□□□□ 0.15
CDK11A-221ENST00000495016 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
CDK11A-221ENST00000495016 PNPLA7Q6ZV29 1317 aa15.97■□□□□ 0.15
CDK11A-221ENST00000495016 POLD1P28340 1107 aa15.97■□□□□ 0.15
CDK11A-221ENST00000495016 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
CDK11A-221ENST00000495016 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
CDK11A-221ENST00000495016 FAM208AQ9UK61 1670 aaKnown RBP15.96■□□□□ 0.15
CDK11A-221ENST00000495016 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
CDK11A-221ENST00000495016 MSH5O43196 834 aa15.95■□□□□ 0.14
CDK11A-221ENST00000495016 PIGBQ92521 554 aa15.95■□□□□ 0.14
CDK11A-221ENST00000495016 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
CDK11A-221ENST00000495016 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
CDK11A-221ENST00000495016 NCAPD2Q15021 1401 aa15.94■□□□□ 0.14
CDK11A-221ENST00000495016 PALLDQ8WX93 1383 aa15.93■□□□□ 0.14
CDK11A-221ENST00000495016 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
CDK11A-221ENST00000495016 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
CDK11A-221ENST00000495016 PHKG2P15735 406 aa15.92■□□□□ 0.14
CDK11A-221ENST00000495016 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
CDK11A-221ENST00000495016 BTAF1O14981 1849 aa15.91■□□□□ 0.14
CDK11A-221ENST00000495016 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
CDK11A-221ENST00000495016 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
CDK11A-221ENST00000495016 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
CDK11A-221ENST00000495016 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
CDK11A-221ENST00000495016 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
CDK11A-221ENST00000495016 IGSF1Q8N6C5 1336 aa15.9■□□□□ 0.14
CDK11A-221ENST00000495016 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
CDK11A-221ENST00000495016 ASAP1Q9ULH1 1129 aa15.89■□□□□ 0.13
CDK11A-221ENST00000495016 MYOM1P52179 1685 aa15.89■□□□□ 0.13
CDK11A-221ENST00000495016 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
CDK11A-221ENST00000495016 SIK1P57059 783 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 GPR162Q16538 588 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
CDK11A-221ENST00000495016 AK7Q96M32 723 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
CDK11A-221ENST00000495016 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
CDK11A-221ENST00000495016 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
CDK11A-221ENST00000495016 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
CDK11A-221ENST00000495016 ATG3Q9NT62 314 aa15.86■□□□□ 0.13
CDK11A-221ENST00000495016 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
CDK11A-221ENST00000495016 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
CDK11A-221ENST00000495016 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
CDK11A-221ENST00000495016 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
CDK11A-221ENST00000495016 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
CDK11A-221ENST00000495016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.84■□□□□ 0.13
CDK11A-221ENST00000495016 IL13P35225 146 aa15.84■□□□□ 0.13
CDK11A-221ENST00000495016 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
CDK11A-221ENST00000495016 PER1O15534 1290 aaPredicted RBP15.83■□□□□ 0.12
CDK11A-221ENST00000495016 PHF14O94880 888 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 MTHFSP49914 203 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 CABP4P57796 275 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 LINC00116Q8NCU8 138 aa15.83■□□□□ 0.12
CDK11A-221ENST00000495016 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 SSFA2P28290 1259 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 ITPK1Q13572 414 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 AMIGO3Q86WK7 504 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
CDK11A-221ENST00000495016 NLGN2Q8NFZ4 835 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
CDK11A-221ENST00000495016 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
CDK11A-221ENST00000495016 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
CDK11A-221ENST00000495016 CD2APQ9Y5K6 639 aa15.81■□□□□ 0.12
CDK11A-221ENST00000495016 GNPATO15228 680 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms