RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 EYA1Q99502 592 aa21.41■■□□□ 1.02
LIMS2-216ENST00000494613 RREB1Q92766 1687 aa21.4■■□□□ 1.02
LIMS2-216ENST00000494613 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
LIMS2-216ENST00000494613 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
LIMS2-216ENST00000494613 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-216ENST00000494613 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
LIMS2-216ENST00000494613 MEGF6O75095 1541 aa21.39■■□□□ 1.02
LIMS2-216ENST00000494613 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
LIMS2-216ENST00000494613 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
LIMS2-216ENST00000494613 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
LIMS2-216ENST00000494613 PDGFDQ9GZP0 370 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-216ENST00000494613 LRRC4BQ9NT99 713 aa21.37■■□□□ 1.01
LIMS2-216ENST00000494613 STK32BQ9NY57 414 aa21.37■■□□□ 1.01
LIMS2-216ENST00000494613 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
LIMS2-216ENST00000494613 CYP27B1O15528 508 aa21.35■■□□□ 1.01
LIMS2-216ENST00000494613 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
LIMS2-216ENST00000494613 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
LIMS2-216ENST00000494613 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
LIMS2-216ENST00000494613 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1.01
LIMS2-216ENST00000494613 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1.01
LIMS2-216ENST00000494613 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
LIMS2-216ENST00000494613 NHSQ6T4R5 1651 aa21.33■■□□□ 1
LIMS2-216ENST00000494613 NSD2O96028 1365 aa21.33■■□□□ 1
LIMS2-216ENST00000494613 LRP5O75197 1615 aa21.32■■□□□ 1
LIMS2-216ENST00000494613 PCDH11XQ9BZA7 1347 aa21.31■■□□□ 1
LIMS2-216ENST00000494613 PCDH11YQ9BZA8 1340 aa21.31■■□□□ 1
LIMS2-216ENST00000494613 KCNQ4P56696 695 aa21.31■■□□□ 1
LIMS2-216ENST00000494613 SLC27A3Q5K4L6 730 aa21.31■■□□□ 1
LIMS2-216ENST00000494613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.3■■□□□ 1
LIMS2-216ENST00000494613 ZBTB7AO95365 584 aa21.29■■□□□ 1
LIMS2-216ENST00000494613 NKX1-1Q15270 411 aaPredicted RBP21.29■■□□□ 1
LIMS2-216ENST00000494613 BTAF1O14981 1849 aa21.29■■□□□ 1
LIMS2-216ENST00000494613 MPRIPQ6WCQ1 1025 aa21.28■■□□□ 1
LIMS2-216ENST00000494613 ATF5Q9Y2D1 282 aaPredicted RBP21.28■■□□□ 1
LIMS2-216ENST00000494613 NCAPD2Q15021 1401 aa21.28■■□□□ 1
LIMS2-216ENST00000494613 AKT1S1Q96B36 256 aa21.27■■□□□ 1
LIMS2-216ENST00000494613 ZNF827Q17R98 1081 aa21.26■□□□□ 0.99
LIMS2-216ENST00000494613 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
LIMS2-216ENST00000494613 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
LIMS2-216ENST00000494613 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
LIMS2-216ENST00000494613 IFNL2Q8IZJ0 200 aa21.25■□□□□ 0.99
LIMS2-216ENST00000494613 IGSF1Q8N6C5 1336 aa21.25■□□□□ 0.99
LIMS2-216ENST00000494613 ANKRD26Q9UPS8 1709 aa21.24■□□□□ 0.99
LIMS2-216ENST00000494613 MTHFSP49914 203 aa21.24■□□□□ 0.99
LIMS2-216ENST00000494613 PIGBQ92521 554 aa21.24■□□□□ 0.99
LIMS2-216ENST00000494613 CCNL1Q9UK58 526 aaPredicted RBP21.24■□□□□ 0.99
LIMS2-216ENST00000494613 PHKG2P15735 406 aa21.23■□□□□ 0.99
LIMS2-216ENST00000494613 IL13P35225 146 aa21.22■□□□□ 0.99
LIMS2-216ENST00000494613 PTGER2P43116 358 aa21.22■□□□□ 0.99
LIMS2-216ENST00000494613 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
LIMS2-216ENST00000494613 PLEKHO1Q53GL0 409 aaPredicted RBP21.21■□□□□ 0.99
LIMS2-216ENST00000494613 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
LIMS2-216ENST00000494613 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
LIMS2-216ENST00000494613 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
LIMS2-216ENST00000494613 DOT1LQ8TEK3 1739 aa21.19■□□□□ 0.98
LIMS2-216ENST00000494613 AEBP1Q8IUX7 1158 aa21.19■□□□□ 0.98
LIMS2-216ENST00000494613 SMARCC1Q92922 1105 aaPredicted RBP21.19■□□□□ 0.98
LIMS2-216ENST00000494613 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
LIMS2-216ENST00000494613 SLC16A10Q8TF71 515 aa21.17■□□□□ 0.98
LIMS2-216ENST00000494613 SGIP1Q9BQI5 828 aa21.17■□□□□ 0.98
LIMS2-216ENST00000494613 TMOD3Q9NYL9 352 aa21.17■□□□□ 0.98
LIMS2-216ENST00000494613 CASZ1Q86V15 1759 aa21.16■□□□□ 0.98
LIMS2-216ENST00000494613 PNPLA7Q6ZV29 1317 aa21.16■□□□□ 0.98
LIMS2-216ENST00000494613 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
LIMS2-216ENST00000494613 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
LIMS2-216ENST00000494613 HMGB2P26583 209 aaKnown RBP21.15■□□□□ 0.98
LIMS2-216ENST00000494613 ZNF530Q6P9A1 599 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-216ENST00000494613 ERVV-2B6SEH9 535 aa21.14■□□□□ 0.97
LIMS2-216ENST00000494613 HSP90AB1P08238 724 aaKnown RBP21.14■□□□□ 0.97
LIMS2-216ENST00000494613 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
LIMS2-216ENST00000494613 PKD1L3Q7Z443 1732 aa21.14■□□□□ 0.97
LIMS2-216ENST00000494613 PAPPAQ13219 1627 aa21.14■□□□□ 0.97
LIMS2-216ENST00000494613 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
LIMS2-216ENST00000494613 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
LIMS2-216ENST00000494613 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
LIMS2-216ENST00000494613 ATG3Q9NT62 314 aa21.13■□□□□ 0.97
LIMS2-216ENST00000494613 DIAPH1O60610 1272 aaKnown RBP21.12■□□□□ 0.97
LIMS2-216ENST00000494613 LY75O60449 1722 aa21.12■□□□□ 0.97
LIMS2-216ENST00000494613 LOC102724428A0A0B4J2F2 783 aa21.11■□□□□ 0.97
LIMS2-216ENST00000494613 MSH5O43196 834 aa21.11■□□□□ 0.97
LIMS2-216ENST00000494613 HMOX1P09601 288 aa21.11■□□□□ 0.97
LIMS2-216ENST00000494613 SIK1P57059 783 aa21.11■□□□□ 0.97
LIMS2-216ENST00000494613 ARXQ96QS3 562 aa21.11■□□□□ 0.97
LIMS2-216ENST00000494613 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
LIMS2-216ENST00000494613 SYT17Q9BSW7 474 aa21.1■□□□□ 0.97
LIMS2-216ENST00000494613 KDRP35968 1356 aa21.1■□□□□ 0.97
LIMS2-216ENST00000494613 CABP4P57796 275 aa21.09■□□□□ 0.97
LIMS2-216ENST00000494613 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-216ENST00000494613 ITGB4P16144 1822 aa21.08■□□□□ 0.97
LIMS2-216ENST00000494613 ATP6V1AP38606 617 aa21.08■□□□□ 0.97
LIMS2-216ENST00000494613 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
LIMS2-216ENST00000494613 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
LIMS2-216ENST00000494613 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
LIMS2-216ENST00000494613 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
LIMS2-216ENST00000494613 ITPK1Q13572 414 aa21.06■□□□□ 0.96
LIMS2-216ENST00000494613 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
LIMS2-216ENST00000494613 POLD1P28340 1107 aa21.05■□□□□ 0.96
LIMS2-216ENST00000494613 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
LIMS2-216ENST00000494613 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
LIMS2-216ENST00000494613 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms