RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
CCSER2-208ENST00000494586 MTHFSDQ2M296 383 aaKnown RBP12.01□□□□□ -0.49
CCSER2-208ENST00000494586 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
CCSER2-208ENST00000494586 USHBP1Q8N6Y0 703 aa12.01□□□□□ -0.49
CCSER2-208ENST00000494586 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
CCSER2-208ENST00000494586 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
CCSER2-208ENST00000494586 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 NRAPQ86VF7 1730 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 TNKS1BP1Q9C0C2 1729 aaKnown RBP12□□□□□ -0.49
CCSER2-208ENST00000494586 RIPK4P57078 832 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 WDR63Q8IWG1 891 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 ZNF521Q96K83 1311 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 DISP2A7MBM2 1401 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 ATRNO75882 1429 aa12□□□□□ -0.49
CCSER2-208ENST00000494586 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCSER2-208ENST00000494586 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
CCSER2-208ENST00000494586 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
CCSER2-208ENST00000494586 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
CCSER2-208ENST00000494586 QTRT2Q9H974 415 aaKnown RBP11.99□□□□□ -0.49
CCSER2-208ENST00000494586 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CCSER2-208ENST00000494586 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
CCSER2-208ENST00000494586 EXOC5O00471 708 aa11.98□□□□□ -0.49
CCSER2-208ENST00000494586 HSP90AB1P08238 724 aaKnown RBP11.98□□□□□ -0.49
CCSER2-208ENST00000494586 CALD1Q05682 793 aaKnown RBP11.98□□□□□ -0.49
CCSER2-208ENST00000494586 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
CCSER2-208ENST00000494586 IL16Q14005 1332 aa11.97□□□□□ -0.49
CCSER2-208ENST00000494586 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
CCSER2-208ENST00000494586 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
CCSER2-208ENST00000494586 MEGF6O75095 1541 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 PCDH11XQ9BZA7 1347 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 PCDH11YQ9BZA8 1340 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 PHKG2P15735 406 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
CCSER2-208ENST00000494586 USP35Q9P2H5 1018 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 RGPD2P0DJD1 1756 aa11.96□□□□□ -0.49
CCSER2-208ENST00000494586 CYP27B1O15528 508 aa11.95□□□□□ -0.5
CCSER2-208ENST00000494586 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
CCSER2-208ENST00000494586 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
CCSER2-208ENST00000494586 TRMT2AQ8IZ69 625 aaKnown RBP11.95□□□□□ -0.5
CCSER2-208ENST00000494586 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
CCSER2-208ENST00000494586 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
CCSER2-208ENST00000494586 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 DDB1Q16531 1140 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
CCSER2-208ENST00000494586 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
CCSER2-208ENST00000494586 ERVV-2B6SEH9 535 aa11.93□□□□□ -0.5
CCSER2-208ENST00000494586 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
CCSER2-208ENST00000494586 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
CCSER2-208ENST00000494586 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
CCSER2-208ENST00000494586 BCL9O00512 1426 aa11.93□□□□□ -0.5
CCSER2-208ENST00000494586 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
CCSER2-208ENST00000494586 PARP4Q9UKK3 1724 aaKnown RBP11.92□□□□□ -0.5
CCSER2-208ENST00000494586 E9PSI1 815 aa11.92□□□□□ -0.5
CCSER2-208ENST00000494586 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
CCSER2-208ENST00000494586 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
CCSER2-208ENST00000494586 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
CCSER2-208ENST00000494586 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
CCSER2-208ENST00000494586 CHL1O00533 1208 aa11.91□□□□□ -0.5
CCSER2-208ENST00000494586 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
CCSER2-208ENST00000494586 RXRBP28702 533 aa11.91□□□□□ -0.5
CCSER2-208ENST00000494586 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
CCSER2-208ENST00000494586 GLI3P10071 1580 aa11.91□□□□□ -0.5
CCSER2-208ENST00000494586 GNAI1P63096 354 aa11.9□□□□□ -0.5
CCSER2-208ENST00000494586 TAF7Q15545 349 aaPredicted RBP11.9□□□□□ -0.5
CCSER2-208ENST00000494586 YTHDC1Q96MU7 727 aaKnown RBP11.9□□□□□ -0.5
CCSER2-208ENST00000494586 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
CCSER2-208ENST00000494586 MPRIPQ6WCQ1 1025 aa11.89□□□□□ -0.51
CCSER2-208ENST00000494586 MCM10Q7L590 875 aa11.89□□□□□ -0.51
CCSER2-208ENST00000494586 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
CCSER2-208ENST00000494586 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CCSER2-208ENST00000494586 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
CCSER2-208ENST00000494586 MYH16Q9H6N6 1097 aa11.89□□□□□ -0.51
CCSER2-208ENST00000494586 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
CCSER2-208ENST00000494586 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
CCSER2-208ENST00000494586 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
CCSER2-208ENST00000494586 DCTN1Q14203 1278 aa11.88□□□□□ -0.51
CCSER2-208ENST00000494586 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
CCSER2-208ENST00000494586 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
CCSER2-208ENST00000494586 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
CCSER2-208ENST00000494586 TEFQ10587 303 aa11.87□□□□□ -0.51
CCSER2-208ENST00000494586 POTEAQ6S8J7 498 aa11.87□□□□□ -0.51
CCSER2-208ENST00000494586 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
CCSER2-208ENST00000494586 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
CCSER2-208ENST00000494586 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
CCSER2-208ENST00000494586 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
CCSER2-208ENST00000494586 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
CCSER2-208ENST00000494586 MRC1P22897 1456 aa11.85□□□□□ -0.51
CCSER2-208ENST00000494586 CABP4P57796 275 aa11.85□□□□□ -0.51
CCSER2-208ENST00000494586 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
CCSER2-208ENST00000494586 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
CCSER2-208ENST00000494586 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
CCSER2-208ENST00000494586 DLG5Q8TDM6 1919 aa11.85□□□□□ -0.51
CCSER2-208ENST00000494586 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 BTBD11A6QL63 1104 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms