RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
UBR4-216ENST00000494503 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
UBR4-216ENST00000494503 TMF1P82094 1093 aa13.47□□□□□ -0.25
UBR4-216ENST00000494503 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
UBR4-216ENST00000494503 TESK2Q96S53 571 aa13.47□□□□□ -0.25
UBR4-216ENST00000494503 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
UBR4-216ENST00000494503 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
UBR4-216ENST00000494503 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.25
UBR4-216ENST00000494503 MEGF6O75095 1541 aa13.46□□□□□ -0.25
UBR4-216ENST00000494503 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
UBR4-216ENST00000494503 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
UBR4-216ENST00000494503 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
UBR4-216ENST00000494503 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
UBR4-216ENST00000494503 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
UBR4-216ENST00000494503 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
UBR4-216ENST00000494503 USP47Q96K76 1375 aa13.45□□□□□ -0.26
UBR4-216ENST00000494503 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
UBR4-216ENST00000494503 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
UBR4-216ENST00000494503 LY75O60449 1722 aa13.44□□□□□ -0.26
UBR4-216ENST00000494503 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
UBR4-216ENST00000494503 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
UBR4-216ENST00000494503 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
UBR4-216ENST00000494503 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
UBR4-216ENST00000494503 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
UBR4-216ENST00000494503 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
UBR4-216ENST00000494503 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
UBR4-216ENST00000494503 SLC16A10Q8TF71 515 aa13.42□□□□□ -0.26
UBR4-216ENST00000494503 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
UBR4-216ENST00000494503 FYB1O15117 783 aa13.41□□□□□ -0.26
UBR4-216ENST00000494503 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
UBR4-216ENST00000494503 HSP90AB2PQ58FF8 381 aa13.4□□□□□ -0.26
UBR4-216ENST00000494503 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
UBR4-216ENST00000494503 NSD2O96028 1365 aa13.4□□□□□ -0.26
UBR4-216ENST00000494503 C5P01031 1676 aa13.4□□□□□ -0.26
UBR4-216ENST00000494503 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 NLGN2Q8NFZ4 835 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 FLT4P35916 1363 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
UBR4-216ENST00000494503 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
UBR4-216ENST00000494503 NSD3Q9BZ95 1437 aa13.38□□□□□ -0.27
UBR4-216ENST00000494503 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
UBR4-216ENST00000494503 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
UBR4-216ENST00000494503 ITGB4P16144 1822 aa13.36□□□□□ -0.27
UBR4-216ENST00000494503 INSRP06213 1382 aa13.36□□□□□ -0.27
UBR4-216ENST00000494503 PHF14O94880 888 aa13.36□□□□□ -0.27
UBR4-216ENST00000494503 AK7Q96M32 723 aa13.36□□□□□ -0.27
UBR4-216ENST00000494503 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
UBR4-216ENST00000494503 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
UBR4-216ENST00000494503 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
UBR4-216ENST00000494503 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
UBR4-216ENST00000494503 COL24A1Q17RW2 1714 aa13.34□□□□□ -0.27
UBR4-216ENST00000494503 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
UBR4-216ENST00000494503 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
UBR4-216ENST00000494503 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
UBR4-216ENST00000494503 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.27
UBR4-216ENST00000494503 C1QTNF8P60827 252 aa13.33□□□□□ -0.28
UBR4-216ENST00000494503 CYP27B1O15528 508 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
UBR4-216ENST00000494503 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
UBR4-216ENST00000494503 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 SPG7Q9UQ90 795 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
UBR4-216ENST00000494503 YBX3P16989 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBR4-216ENST00000494503 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
UBR4-216ENST00000494503 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
UBR4-216ENST00000494503 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
UBR4-216ENST00000494503 PIGBQ92521 554 aa13.29□□□□□ -0.28
UBR4-216ENST00000494503 ANKRD26Q9UPS8 1709 aa13.28□□□□□ -0.28
UBR4-216ENST00000494503 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
UBR4-216ENST00000494503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.28□□□□□ -0.28
UBR4-216ENST00000494503 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
UBR4-216ENST00000494503 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 GNPATO15228 680 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 SIK1P57059 783 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 EYA1Q99502 592 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
UBR4-216ENST00000494503 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
UBR4-216ENST00000494503 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
UBR4-216ENST00000494503 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
UBR4-216ENST00000494503 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
UBR4-216ENST00000494503 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
UBR4-216ENST00000494503 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
UBR4-216ENST00000494503 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
UBR4-216ENST00000494503 PHKG2P15735 406 aa13.24□□□□□ -0.29
UBR4-216ENST00000494503 SSFA2P28290 1259 aa13.24□□□□□ -0.29
UBR4-216ENST00000494503 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
UBR4-216ENST00000494503 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
UBR4-216ENST00000494503 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
UBR4-216ENST00000494503 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
UBR4-216ENST00000494503 ITPK1Q13572 414 aa13.22□□□□□ -0.29
UBR4-216ENST00000494503 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
UBR4-216ENST00000494503 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms