RNA–Protein interactions for RNA: ENST00000494164.5

NEPRO-220, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-220ENST00000494164 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
NEPRO-220ENST00000494164 COG3Q96JB2 828 aa21.22■□□□□ 0.99
NEPRO-220ENST00000494164 ST20-MTHFSA0A0A6YYL1 179 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 HOXC9P31274 260 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 AMPHP49418 695 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 NSD2O96028 1365 aa21.21■□□□□ 0.99
NEPRO-220ENST00000494164 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
NEPRO-220ENST00000494164 TESK2Q96S53 571 aa21.2■□□□□ 0.98
NEPRO-220ENST00000494164 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
NEPRO-220ENST00000494164 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
NEPRO-220ENST00000494164 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
NEPRO-220ENST00000494164 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
NEPRO-220ENST00000494164 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
NEPRO-220ENST00000494164 PKD1L3Q7Z443 1732 aa21.18■□□□□ 0.98
NEPRO-220ENST00000494164 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
NEPRO-220ENST00000494164 GPR162Q16538 588 aa21.17■□□□□ 0.98
NEPRO-220ENST00000494164 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
NEPRO-220ENST00000494164 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
NEPRO-220ENST00000494164 ZCRB1Q8TBF4 217 aaKnown RBP21.15■□□□□ 0.98
NEPRO-220ENST00000494164 GGNBP2Q9H3C7 697 aa21.15■□□□□ 0.98
NEPRO-220ENST00000494164 ANKRD26Q9UPS8 1709 aa21.15■□□□□ 0.98
NEPRO-220ENST00000494164 POLD1P28340 1107 aa21.14■□□□□ 0.97
NEPRO-220ENST00000494164 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.97
NEPRO-220ENST00000494164 C4BP0C0L5 1744 aa21.13■□□□□ 0.97
NEPRO-220ENST00000494164 MSH5O43196 834 aa21.13■□□□□ 0.97
NEPRO-220ENST00000494164 NBPF6Q5VWK0 638 aa21.13■□□□□ 0.97
NEPRO-220ENST00000494164 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
NEPRO-220ENST00000494164 NBPF4Q96M43 638 aa21.13■□□□□ 0.97
NEPRO-220ENST00000494164 CCNL1Q9UK58 526 aaPredicted RBP21.13■□□□□ 0.97
NEPRO-220ENST00000494164 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
NEPRO-220ENST00000494164 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
NEPRO-220ENST00000494164 SLC16A10Q8TF71 515 aa21.11■□□□□ 0.97
NEPRO-220ENST00000494164 USP47Q96K76 1375 aa21.1■□□□□ 0.97
NEPRO-220ENST00000494164 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
NEPRO-220ENST00000494164 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.97
NEPRO-220ENST00000494164 FYB1O15117 783 aa21.08■□□□□ 0.97
NEPRO-220ENST00000494164 VIRMAQ69YN4 1812 aaKnown RBP21.07■□□□□ 0.96
NEPRO-220ENST00000494164 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
NEPRO-220ENST00000494164 RAPGEF4Q8WZA2 1011 aa21.07■□□□□ 0.96
NEPRO-220ENST00000494164 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
NEPRO-220ENST00000494164 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
NEPRO-220ENST00000494164 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
NEPRO-220ENST00000494164 TMF1P82094 1093 aa21.04■□□□□ 0.96
NEPRO-220ENST00000494164 N4BP2Q86UW6 1770 aaPredicted RBP21.04■□□□□ 0.96
NEPRO-220ENST00000494164 FLT4P35916 1363 aa21.03■□□□□ 0.96
NEPRO-220ENST00000494164 YBX3P16989 372 aaKnown RBP eCLIP21.03■□□□□ 0.96
NEPRO-220ENST00000494164 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
NEPRO-220ENST00000494164 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
NEPRO-220ENST00000494164 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
NEPRO-220ENST00000494164 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
NEPRO-220ENST00000494164 INSRP06213 1382 aa21.02■□□□□ 0.96
NEPRO-220ENST00000494164 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
NEPRO-220ENST00000494164 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
NEPRO-220ENST00000494164 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
NEPRO-220ENST00000494164 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
NEPRO-220ENST00000494164 GIGYF1O75420 1035 aaPredicted RBP20.99■□□□□ 0.95
NEPRO-220ENST00000494164 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
NEPRO-220ENST00000494164 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
NEPRO-220ENST00000494164 CYP27B1O15528 508 aa20.98■□□□□ 0.95
NEPRO-220ENST00000494164 KIF13BQ9NQT8 1826 aa20.97■□□□□ 0.95
NEPRO-220ENST00000494164 SLC24A1O60721 1099 aa20.97■□□□□ 0.95
NEPRO-220ENST00000494164 WWC3Q9ULE0 1092 aa20.97■□□□□ 0.95
NEPRO-220ENST00000494164 COL5A3P25940 1745 aaPredicted RBP20.97■□□□□ 0.95
NEPRO-220ENST00000494164 PHF14O94880 888 aa20.96■□□□□ 0.95
NEPRO-220ENST00000494164 AMIGO3Q86WK7 504 aa20.96■□□□□ 0.95
NEPRO-220ENST00000494164 MYH14Q7Z406 1995 aaKnown RBP20.96■□□□□ 0.95
NEPRO-220ENST00000494164 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
NEPRO-220ENST00000494164 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
NEPRO-220ENST00000494164 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
NEPRO-220ENST00000494164 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
NEPRO-220ENST00000494164 AK7Q96M32 723 aa20.93■□□□□ 0.94
NEPRO-220ENST00000494164 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
NEPRO-220ENST00000494164 NCAPD2Q15021 1401 aa20.92■□□□□ 0.94
NEPRO-220ENST00000494164 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
NEPRO-220ENST00000494164 PIGBQ92521 554 aa20.91■□□□□ 0.94
NEPRO-220ENST00000494164 GRIN3BO60391 1043 aa20.9■□□□□ 0.94
NEPRO-220ENST00000494164 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
NEPRO-220ENST00000494164 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.93
NEPRO-220ENST00000494164 LINC00116Q8NCU8 138 aa20.88■□□□□ 0.93
NEPRO-220ENST00000494164 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
NEPRO-220ENST00000494164 SMARCC1Q92922 1105 aaPredicted RBP20.88■□□□□ 0.93
NEPRO-220ENST00000494164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.87■□□□□ 0.93
NEPRO-220ENST00000494164 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
NEPRO-220ENST00000494164 CD2APQ9Y5K6 639 aa20.87■□□□□ 0.93
NEPRO-220ENST00000494164 SCN11AQ9UI33 1791 aa20.87■□□□□ 0.93
NEPRO-220ENST00000494164 ZNF831Q5JPB2 1677 aa20.86■□□□□ 0.93
NEPRO-220ENST00000494164 IGSF1Q8N6C5 1336 aa20.86■□□□□ 0.93
NEPRO-220ENST00000494164 TNNT2P45379 298 aaPredicted RBP20.86■□□□□ 0.93
NEPRO-220ENST00000494164 EYA1Q99502 592 aa20.86■□□□□ 0.93
NEPRO-220ENST00000494164 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
NEPRO-220ENST00000494164 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
NEPRO-220ENST00000494164 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
NEPRO-220ENST00000494164 LOC102724428A0A0B4J2F2 783 aa20.85■□□□□ 0.93
NEPRO-220ENST00000494164 SIK1P57059 783 aa20.85■□□□□ 0.93
NEPRO-220ENST00000494164 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
NEPRO-220ENST00000494164 ASAP1Q9ULH1 1129 aa20.85■□□□□ 0.93
NEPRO-220ENST00000494164 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
NEPRO-220ENST00000494164 WASHC2AQ641Q2 1341 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms