RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
CTDSP1-212ENST00000494067 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
CTDSP1-212ENST00000494067 FLT4P35916 1363 aa18.58■□□□□ 0.57
CTDSP1-212ENST00000494067 TOGARAM1Q9Y4F4 1720 aa18.58■□□□□ 0.57
CTDSP1-212ENST00000494067 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
CTDSP1-212ENST00000494067 LY75O60449 1722 aa18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 EIF4G2P78344 907 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 STK32BQ9NY57 414 aa18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 TUBGCP6Q96RT7 1819 aa18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
CTDSP1-212ENST00000494067 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
CTDSP1-212ENST00000494067 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
CTDSP1-212ENST00000494067 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
CTDSP1-212ENST00000494067 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
CTDSP1-212ENST00000494067 ZCRB1Q8TBF4 217 aaKnown RBP18.54■□□□□ 0.56
CTDSP1-212ENST00000494067 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
CTDSP1-212ENST00000494067 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
CTDSP1-212ENST00000494067 SLC15A2Q16348 729 aa18.52■□□□□ 0.56
CTDSP1-212ENST00000494067 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
CTDSP1-212ENST00000494067 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
CTDSP1-212ENST00000494067 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
CTDSP1-212ENST00000494067 KCNQ4P56696 695 aa18.51■□□□□ 0.55
CTDSP1-212ENST00000494067 RAPGEF4Q8WZA2 1011 aa18.51■□□□□ 0.55
CTDSP1-212ENST00000494067 QSER1Q2KHR3 1735 aa18.51■□□□□ 0.55
CTDSP1-212ENST00000494067 ITGB4P16144 1822 aa18.51■□□□□ 0.55
CTDSP1-212ENST00000494067 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
CTDSP1-212ENST00000494067 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
CTDSP1-212ENST00000494067 PANK3Q9H999 370 aa18.5■□□□□ 0.55
CTDSP1-212ENST00000494067 PPM1GO15355 546 aaPredicted RBP18.49■□□□□ 0.55
CTDSP1-212ENST00000494067 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
CTDSP1-212ENST00000494067 CYP27B1O15528 508 aa18.48■□□□□ 0.55
CTDSP1-212ENST00000494067 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
CTDSP1-212ENST00000494067 PTGER2P43116 358 aa18.48■□□□□ 0.55
CTDSP1-212ENST00000494067 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
CTDSP1-212ENST00000494067 EYA1Q99502 592 aa18.47■□□□□ 0.55
CTDSP1-212ENST00000494067 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
CTDSP1-212ENST00000494067 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
CTDSP1-212ENST00000494067 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-212ENST00000494067 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
CTDSP1-212ENST00000494067 C5P01031 1676 aa18.45■□□□□ 0.54
CTDSP1-212ENST00000494067 SGIP1Q9BQI5 828 aa18.45■□□□□ 0.54
CTDSP1-212ENST00000494067 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
CTDSP1-212ENST00000494067 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-212ENST00000494067 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
CTDSP1-212ENST00000494067 PCDH11XQ9BZA7 1347 aa18.44■□□□□ 0.54
CTDSP1-212ENST00000494067 PCDH11YQ9BZA8 1340 aa18.44■□□□□ 0.54
CTDSP1-212ENST00000494067 HMGB2P26583 209 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-212ENST00000494067 MTFR1LQ9H019 292 aa18.43■□□□□ 0.54
CTDSP1-212ENST00000494067 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
CTDSP1-212ENST00000494067 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
CTDSP1-212ENST00000494067 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
CTDSP1-212ENST00000494067 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
CTDSP1-212ENST00000494067 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
CTDSP1-212ENST00000494067 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-212ENST00000494067 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
CTDSP1-212ENST00000494067 SLC16A10Q8TF71 515 aa18.37■□□□□ 0.53
CTDSP1-212ENST00000494067 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-212ENST00000494067 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
CTDSP1-212ENST00000494067 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
CTDSP1-212ENST00000494067 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
CTDSP1-212ENST00000494067 PIGBQ92521 554 aa18.35■□□□□ 0.53
CTDSP1-212ENST00000494067 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 PHKG2P15735 406 aa18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 POLD1P28340 1107 aa18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 AEBP1Q8IUX7 1158 aa18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 ARXQ96QS3 562 aa18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-212ENST00000494067 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.53
CTDSP1-212ENST00000494067 UTRNP46939 3433 aa18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 MSH5O43196 834 aa18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 YY1P25490 414 aa18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 SMARCC1Q92922 1105 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-212ENST00000494067 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-212ENST00000494067 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
CTDSP1-212ENST00000494067 IL13P35225 146 aa18.29■□□□□ 0.52
CTDSP1-212ENST00000494067 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
CTDSP1-212ENST00000494067 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
CTDSP1-212ENST00000494067 KDRP35968 1356 aa18.28■□□□□ 0.52
CTDSP1-212ENST00000494067 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
CTDSP1-212ENST00000494067 COL5A3P25940 1745 aaPredicted RBP18.27■□□□□ 0.52
CTDSP1-212ENST00000494067 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
CTDSP1-212ENST00000494067 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
CTDSP1-212ENST00000494067 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-212ENST00000494067 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
CTDSP1-212ENST00000494067 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 ITPK1Q13572 414 aa18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
CTDSP1-212ENST00000494067 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
CTDSP1-212ENST00000494067 MTHFSP49914 203 aa18.25■□□□□ 0.51
CTDSP1-212ENST00000494067 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
CTDSP1-212ENST00000494067 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms