RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 IL13P35225 146 aa13.62□□□□□ -0.23
RFC2-211ENST00000494019 EXOC5O00471 708 aa13.61□□□□□ -0.23
RFC2-211ENST00000494019 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
RFC2-211ENST00000494019 ITGB4P16144 1822 aa13.61□□□□□ -0.23
RFC2-211ENST00000494019 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
RFC2-211ENST00000494019 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
RFC2-211ENST00000494019 BTAF1O14981 1849 aa13.6□□□□□ -0.23
RFC2-211ENST00000494019 KDRP35968 1356 aa13.59□□□□□ -0.23
RFC2-211ENST00000494019 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
RFC2-211ENST00000494019 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
RFC2-211ENST00000494019 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
RFC2-211ENST00000494019 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
RFC2-211ENST00000494019 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
RFC2-211ENST00000494019 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
RFC2-211ENST00000494019 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.24
RFC2-211ENST00000494019 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.24
RFC2-211ENST00000494019 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
RFC2-211ENST00000494019 HMOX1P09601 288 aa13.57□□□□□ -0.24
RFC2-211ENST00000494019 DDX54Q8TDD1 881 aaKnown RBP13.56□□□□□ -0.24
RFC2-211ENST00000494019 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
RFC2-211ENST00000494019 BCL9O00512 1426 aa13.56□□□□□ -0.24
RFC2-211ENST00000494019 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
RFC2-211ENST00000494019 RREB1Q92766 1687 aa13.55□□□□□ -0.24
RFC2-211ENST00000494019 ANP32CO43423 234 aa13.54□□□□□ -0.24
RFC2-211ENST00000494019 TRIM37O94972 964 aa13.54□□□□□ -0.24
RFC2-211ENST00000494019 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
RFC2-211ENST00000494019 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
RFC2-211ENST00000494019 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
RFC2-211ENST00000494019 CYP27B1O15528 508 aa13.52□□□□□ -0.25
RFC2-211ENST00000494019 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
RFC2-211ENST00000494019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
RFC2-211ENST00000494019 LY75O60449 1722 aa13.52□□□□□ -0.25
RFC2-211ENST00000494019 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.25
RFC2-211ENST00000494019 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
RFC2-211ENST00000494019 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
RFC2-211ENST00000494019 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
RFC2-211ENST00000494019 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
RFC2-211ENST00000494019 PHKG2P15735 406 aa13.5□□□□□ -0.25
RFC2-211ENST00000494019 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
RFC2-211ENST00000494019 ZNF530Q6P9A1 599 aaPredicted RBP13.5□□□□□ -0.25
RFC2-211ENST00000494019 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
RFC2-211ENST00000494019 BAG6P46379 1132 aa13.49□□□□□ -0.25
RFC2-211ENST00000494019 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
RFC2-211ENST00000494019 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
RFC2-211ENST00000494019 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
RFC2-211ENST00000494019 KCNQ2O43526 872 aa13.48□□□□□ -0.25
RFC2-211ENST00000494019 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
RFC2-211ENST00000494019 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
RFC2-211ENST00000494019 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
RFC2-211ENST00000494019 FCHSD2O94868 740 aa13.47□□□□□ -0.25
RFC2-211ENST00000494019 APBA3O96018 575 aa13.47□□□□□ -0.25
RFC2-211ENST00000494019 WDR43Q15061 677 aaKnown RBP eCLIP13.47□□□□□ -0.25
RFC2-211ENST00000494019 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
RFC2-211ENST00000494019 DEFB132Q7Z7B7 95 aa13.47□□□□□ -0.25
RFC2-211ENST00000494019 TAF1LQ8IZX4 1826 aa13.47□□□□□ -0.25
RFC2-211ENST00000494019 PAPPAQ13219 1627 aa13.46□□□□□ -0.25
RFC2-211ENST00000494019 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
RFC2-211ENST00000494019 MTHFSDQ2M296 383 aaKnown RBP13.46□□□□□ -0.25
RFC2-211ENST00000494019 C5P01031 1676 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 MRC1P22897 1456 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 NEFMP07197 916 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
RFC2-211ENST00000494019 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
RFC2-211ENST00000494019 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
RFC2-211ENST00000494019 AKAP4Q5JQC9 854 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
RFC2-211ENST00000494019 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
RFC2-211ENST00000494019 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
RFC2-211ENST00000494019 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
RFC2-211ENST00000494019 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
RFC2-211ENST00000494019 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
RFC2-211ENST00000494019 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
RFC2-211ENST00000494019 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
RFC2-211ENST00000494019 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
RFC2-211ENST00000494019 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
RFC2-211ENST00000494019 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
RFC2-211ENST00000494019 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
RFC2-211ENST00000494019 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
RFC2-211ENST00000494019 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
RFC2-211ENST00000494019 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
RFC2-211ENST00000494019 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
RFC2-211ENST00000494019 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
RFC2-211ENST00000494019 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
RFC2-211ENST00000494019 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
RFC2-211ENST00000494019 PLSCR1O15162 318 aa13.4□□□□□ -0.26
RFC2-211ENST00000494019 CABP4P57796 275 aa13.4□□□□□ -0.26
RFC2-211ENST00000494019 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
RFC2-211ENST00000494019 ADAMTS8Q9UP79 889 aa13.4□□□□□ -0.26
RFC2-211ENST00000494019 TJP1Q07157 1748 aa13.39□□□□□ -0.27
RFC2-211ENST00000494019 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
RFC2-211ENST00000494019 PIGBQ92521 554 aa13.39□□□□□ -0.27
RFC2-211ENST00000494019 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
RFC2-211ENST00000494019 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms