RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 KRT28Q7Z3Y7 464 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 SUPT16HQ9Y5B9 1047 aaKnown RBP8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 ABCC6O95255 1503 aa8.68□□□□□ -1.02
FNDC3B-212ENST00000494000 CT47B1P0C2W7 299 aaPredicted RBP8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 RGPD1P0DJD0 1748 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 TMPOP42166 694 aaKnown RBP8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 MAP3K19Q56UN5 1328 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 ALS2Q96Q42 1657 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 ORAI2Q96SN7 254 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 NFAT5O94916 1531 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 USP19O94966 1318 aa8.67□□□□□ -1.02
FNDC3B-212ENST00000494000 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 DUSP27Q5VZP5 1158 aa8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 FOXO3O43524 673 aa8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 CLSTN1O94985 981 aa8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
FNDC3B-212ENST00000494000 IP6K1Q92551 441 aa8.65□□□□□ -1.02
FNDC3B-212ENST00000494000 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.02
FNDC3B-212ENST00000494000 LTN1O94822 1766 aa8.65□□□□□ -1.02
FNDC3B-212ENST00000494000 TNS3Q68CZ2 1445 aa8.65□□□□□ -1.02
FNDC3B-212ENST00000494000 PLEKHG2Q9H7P9 1386 aa8.65□□□□□ -1.03
FNDC3B-212ENST00000494000 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.03
FNDC3B-212ENST00000494000 PRKAR2BP31323 418 aa8.65□□□□□ -1.03
FNDC3B-212ENST00000494000 KDRP35968 1356 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 HOXC9P31274 260 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 TEX2Q8IWB9 1127 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 RGL2O15211 777 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 RIPK4P57078 832 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 CDCA7LQ96GN5 454 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 SLAIN2Q9P270 581 aa8.64□□□□□ -1.03
FNDC3B-212ENST00000494000 PXDNQ92626 1479 aa8.63□□□□□ -1.03
FNDC3B-212ENST00000494000 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
FNDC3B-212ENST00000494000 GCP02774 474 aa8.63□□□□□ -1.03
FNDC3B-212ENST00000494000 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
FNDC3B-212ENST00000494000 FBLN1P23142 703 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 RRP1P56182 461 aaKnown RBP8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 GZF1Q9H116 711 aaPredicted RBP8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 SPATA31A3Q5VYP0 1347 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 SULT6B1Q6IMI4 303 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 SLC24A3Q9HC58 644 aa8.62□□□□□ -1.03
FNDC3B-212ENST00000494000 FAM208AQ9UK61 1670 aaKnown RBP8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 SOS2Q07890 1332 aaPredicted RBP8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 BRINP3Q76B58 766 aa8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 HMOX1P09601 288 aa8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 GNAI1P63096 354 aa8.61□□□□□ -1.03
FNDC3B-212ENST00000494000 CPDO75976 1380 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 BRD1O95696 1058 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 SOX12O15370 315 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 MS4A1P11836 297 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 EYA1Q99502 592 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 NCAPD2Q15021 1401 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 CAMTA1Q9Y6Y1 1673 aa8.6□□□□□ -1.03
FNDC3B-212ENST00000494000 CRYBG1Q9Y4K1 1723 aa8.59□□□□□ -1.03
FNDC3B-212ENST00000494000 LTBP4Q8N2S1 1624 aa8.59□□□□□ -1.03
FNDC3B-212ENST00000494000 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
FNDC3B-212ENST00000494000 DLG5Q8TDM6 1919 aa8.59□□□□□ -1.03
FNDC3B-212ENST00000494000 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
FNDC3B-212ENST00000494000 TMCO4Q5TGY1 634 aa8.58□□□□□ -1.04
FNDC3B-212ENST00000494000 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
FNDC3B-212ENST00000494000 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
FNDC3B-212ENST00000494000 AMOTQ4VCS5 1084 aa8.58□□□□□ -1.04
FNDC3B-212ENST00000494000 PHACTR3Q96KR7 559 aa8.58□□□□□ -1.04
FNDC3B-212ENST00000494000 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 PDE3AQ14432 1141 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 PLCD4Q9BRC7 762 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 SPINK5Q9NQ38 1064 aaPredicted RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 SOS1Q07889 1333 aaPredicted RBP8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
FNDC3B-212ENST00000494000 ZNF853P0CG23 659 aa8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 COL18A1P39060 1754 aa8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 PLEKHO1Q53GL0 409 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 OVOS2A0A0G2JMS6 1433 aa8.56□□□□□ -1.04
FNDC3B-212ENST00000494000 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-212ENST00000494000 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms