RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 APLP1P51693 650 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 NLRP6P59044 892 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 LY75O60449 1722 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
PDLIM1-205ENST00000493949 SLC27A3Q5K4L6 730 aa14.62□□□□□ -0.07
PDLIM1-205ENST00000493949 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
PDLIM1-205ENST00000493949 ACSBG1Q96GR2 724 aa14.61□□□□□ -0.07
PDLIM1-205ENST00000493949 KIF3CO14782 793 aa14.6□□□□□ -0.07
PDLIM1-205ENST00000493949 WDR90Q96KV7 1748 aa14.59□□□□□ -0.07
PDLIM1-205ENST00000493949 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
PDLIM1-205ENST00000493949 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 PCNTO95613 3336 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 NFAT5O94916 1531 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 COL13A1Q5TAT6 717 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 CD2APQ9Y5K6 639 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 NEFLP07196 543 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 PRELPP51888 382 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 TFCP2L1Q9NZI6 479 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 CICQ96RK0 1608 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-205ENST00000493949 IL2RBP14784 551 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 ERICH6BQ5W0A0 696 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 JMYQ8N9B5 988 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 TOMM70O94826 608 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 CABP1Q9NZU7 370 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 ERBB3P21860 1342 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 COL23A1Q86Y22 540 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 LTN1O94822 1766 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 DOT1LQ8TEK3 1739 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
PDLIM1-205ENST00000493949 ANP32CO43423 234 aa14.49□□□□□ -0.09
PDLIM1-205ENST00000493949 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
PDLIM1-205ENST00000493949 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 TTC21AQ8NDW8 1320 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 SLC34A2O95436 690 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 KCNQ4P56696 695 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 TNS4Q8IZW8 715 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 C5P01031 1676 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 NSD2O96028 1365 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 FAM208AQ9UK61 1670 aaKnown RBP14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 NBPF1Q3BBV0 1214 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
PDLIM1-205ENST00000493949 MSL1Q68DK7 614 aa14.45□□□□□ -0.1
PDLIM1-205ENST00000493949 MON2Q7Z3U7 1717 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 KIF13BQ9NQT8 1826 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 SOX12O15370 315 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-205ENST00000493949 USP31Q70CQ4 1352 aa14.43□□□□□ -0.1
PDLIM1-205ENST00000493949 UBR3Q6ZT12 1888 aa14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 TOGARAM1Q9Y4F4 1720 aa14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 HMGB2P26583 209 aaKnown RBP14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 ANKRD24Q8TF21 1146 aa14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 DDX54Q8TDD1 881 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-205ENST00000493949 SYTL4Q96C24 671 aaPredicted RBP14.4□□□□□ -0.1
PDLIM1-205ENST00000493949 FSTL1Q12841 308 aa14.39□□□□□ -0.11
PDLIM1-205ENST00000493949 NMRK2Q9NPI5 230 aa14.39□□□□□ -0.11
PDLIM1-205ENST00000493949 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 USP47Q96K76 1375 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 HTRA3P83110 453 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 EVC2Q86UK5 1308 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 FKBP8Q14318 412 aa14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 KTN1Q86UP2 1357 aaKnown RBP14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 WWC3Q9ULE0 1092 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 RGPD2P0DJD1 1756 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
PDLIM1-205ENST00000493949 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
PDLIM1-205ENST00000493949 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
PDLIM1-205ENST00000493949 NSD3Q9BZ95 1437 aa14.33□□□□□ -0.11
PDLIM1-205ENST00000493949 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 ITGB4P16144 1822 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms