RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 APLP1P51693 650 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 NLRP6P59044 892 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 LY75O60449 1722 aa14.63□□□□□ -0.07
PDLIM1-205ENST00000493949 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
PDLIM1-205ENST00000493949 SLC27A3Q5K4L6 730 aa14.62□□□□□ -0.07
PDLIM1-205ENST00000493949 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
PDLIM1-205ENST00000493949 ACSBG1Q96GR2 724 aa14.61□□□□□ -0.07
PDLIM1-205ENST00000493949 KIF3CO14782 793 aa14.6□□□□□ -0.07
PDLIM1-205ENST00000493949 WDR90Q96KV7 1748 aa14.59□□□□□ -0.07
PDLIM1-205ENST00000493949 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
PDLIM1-205ENST00000493949 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 PCNTO95613 3336 aa14.58□□□□□ -0.08
PDLIM1-205ENST00000493949 NFAT5O94916 1531 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 CSB-PGBD3P0DP91 1061 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 COL13A1Q5TAT6 717 aaPredicted RBP14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 CD2APQ9Y5K6 639 aa14.57□□□□□ -0.08
PDLIM1-205ENST00000493949 NEFLP07196 543 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 PRELPP51888 382 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 TFCP2L1Q9NZI6 479 aa14.56□□□□□ -0.08
PDLIM1-205ENST00000493949 CICQ96RK0 1608 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-205ENST00000493949 IL2RBP14784 551 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 ERICH6BQ5W0A0 696 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 JMYQ8N9B5 988 aa14.53□□□□□ -0.08
PDLIM1-205ENST00000493949 TOMM70O94826 608 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 CABP1Q9NZU7 370 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
PDLIM1-205ENST00000493949 ERBB3P21860 1342 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 COL23A1Q86Y22 540 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 LTN1O94822 1766 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 DOT1LQ8TEK3 1739 aa14.51□□□□□ -0.09
PDLIM1-205ENST00000493949 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
PDLIM1-205ENST00000493949 ANP32CO43423 234 aa14.49□□□□□ -0.09
PDLIM1-205ENST00000493949 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
PDLIM1-205ENST00000493949 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 TTC21AQ8NDW8 1320 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 SLC34A2O95436 690 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 KCNQ4P56696 695 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 TNS4Q8IZW8 715 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 C5P01031 1676 aa14.48□□□□□ -0.09
PDLIM1-205ENST00000493949 NSD2O96028 1365 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 FAM208AQ9UK61 1670 aaKnown RBP14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 NBPF1Q3BBV0 1214 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
PDLIM1-205ENST00000493949 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
PDLIM1-205ENST00000493949 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
PDLIM1-205ENST00000493949 MSL1Q68DK7 614 aa14.45□□□□□ -0.1
PDLIM1-205ENST00000493949 MON2Q7Z3U7 1717 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 KIF13BQ9NQT8 1826 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 SOX12O15370 315 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
PDLIM1-205ENST00000493949 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
PDLIM1-205ENST00000493949 USP31Q70CQ4 1352 aa14.43□□□□□ -0.1
PDLIM1-205ENST00000493949 UBR3Q6ZT12 1888 aa14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 TOGARAM1Q9Y4F4 1720 aa14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
PDLIM1-205ENST00000493949 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 HMGB2P26583 209 aaKnown RBP14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 ANKRD24Q8TF21 1146 aa14.41□□□□□ -0.1
PDLIM1-205ENST00000493949 DDX54Q8TDD1 881 aaKnown RBP14.4□□□□□ -0.1
PDLIM1-205ENST00000493949 SYTL4Q96C24 671 aaPredicted RBP14.4□□□□□ -0.1
PDLIM1-205ENST00000493949 FSTL1Q12841 308 aa14.39□□□□□ -0.11
PDLIM1-205ENST00000493949 NMRK2Q9NPI5 230 aa14.39□□□□□ -0.11
PDLIM1-205ENST00000493949 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 USP47Q96K76 1375 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 HTRA3P83110 453 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 EVC2Q86UK5 1308 aa14.38□□□□□ -0.11
PDLIM1-205ENST00000493949 FKBP8Q14318 412 aa14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
PDLIM1-205ENST00000493949 KTN1Q86UP2 1357 aaKnown RBP14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 WWC3Q9ULE0 1092 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 RGPD2P0DJD1 1756 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
PDLIM1-205ENST00000493949 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
PDLIM1-205ENST00000493949 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
PDLIM1-205ENST00000493949 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
PDLIM1-205ENST00000493949 NSD3Q9BZ95 1437 aa14.33□□□□□ -0.11
PDLIM1-205ENST00000493949 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 ITGB4P16144 1822 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
PDLIM1-205ENST00000493949 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms