RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
C1orf43-209ENST00000493814 KCNQ2O43526 872 aa12.54□□□□□ -0.4
C1orf43-209ENST00000493814 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
C1orf43-209ENST00000493814 PANK3Q9H999 370 aa12.54□□□□□ -0.4
C1orf43-209ENST00000493814 NSD2O96028 1365 aa12.54□□□□□ -0.4
C1orf43-209ENST00000493814 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
C1orf43-209ENST00000493814 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
C1orf43-209ENST00000493814 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
C1orf43-209ENST00000493814 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
C1orf43-209ENST00000493814 QSER1Q2KHR3 1735 aa12.53□□□□□ -0.4
C1orf43-209ENST00000493814 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.41
C1orf43-209ENST00000493814 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
C1orf43-209ENST00000493814 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.41
C1orf43-209ENST00000493814 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
C1orf43-209ENST00000493814 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
C1orf43-209ENST00000493814 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
C1orf43-209ENST00000493814 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
C1orf43-209ENST00000493814 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
C1orf43-209ENST00000493814 PROM2Q8N271 834 aa12.5□□□□□ -0.41
C1orf43-209ENST00000493814 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
C1orf43-209ENST00000493814 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
C1orf43-209ENST00000493814 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
C1orf43-209ENST00000493814 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
C1orf43-209ENST00000493814 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
C1orf43-209ENST00000493814 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
C1orf43-209ENST00000493814 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
C1orf43-209ENST00000493814 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
C1orf43-209ENST00000493814 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
C1orf43-209ENST00000493814 C5P01031 1676 aa12.48□□□□□ -0.41
C1orf43-209ENST00000493814 MORC1Q86VD1 984 aa12.47□□□□□ -0.41
C1orf43-209ENST00000493814 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
C1orf43-209ENST00000493814 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
C1orf43-209ENST00000493814 EYA1Q99502 592 aa12.46□□□□□ -0.41
C1orf43-209ENST00000493814 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
C1orf43-209ENST00000493814 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
C1orf43-209ENST00000493814 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
C1orf43-209ENST00000493814 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
C1orf43-209ENST00000493814 COL24A1Q17RW2 1714 aa12.43□□□□□ -0.42
C1orf43-209ENST00000493814 CYP27B1O15528 508 aa12.43□□□□□ -0.42
C1orf43-209ENST00000493814 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
C1orf43-209ENST00000493814 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
C1orf43-209ENST00000493814 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
C1orf43-209ENST00000493814 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
C1orf43-209ENST00000493814 LRRC4BQ9NT99 713 aa12.42□□□□□ -0.42
C1orf43-209ENST00000493814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
C1orf43-209ENST00000493814 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
C1orf43-209ENST00000493814 PDGFDQ9GZP0 370 aaPredicted RBP12.41□□□□□ -0.42
C1orf43-209ENST00000493814 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
C1orf43-209ENST00000493814 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
C1orf43-209ENST00000493814 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
C1orf43-209ENST00000493814 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
C1orf43-209ENST00000493814 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
C1orf43-209ENST00000493814 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
C1orf43-209ENST00000493814 ZNF827Q17R98 1081 aa12.39□□□□□ -0.43
C1orf43-209ENST00000493814 MPRIPQ6WCQ1 1025 aa12.39□□□□□ -0.43
C1orf43-209ENST00000493814 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
C1orf43-209ENST00000493814 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
C1orf43-209ENST00000493814 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 PHKG2P15735 406 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 KCNQ4P56696 695 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
C1orf43-209ENST00000493814 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 NPC1L1Q9UHC9 1359 aa12.38□□□□□ -0.43
C1orf43-209ENST00000493814 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
C1orf43-209ENST00000493814 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
C1orf43-209ENST00000493814 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
C1orf43-209ENST00000493814 KDRP35968 1356 aa12.36□□□□□ -0.43
C1orf43-209ENST00000493814 IL13P35225 146 aa12.36□□□□□ -0.43
C1orf43-209ENST00000493814 MTHFSP49914 203 aa12.36□□□□□ -0.43
C1orf43-209ENST00000493814 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
C1orf43-209ENST00000493814 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
C1orf43-209ENST00000493814 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
C1orf43-209ENST00000493814 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 PIGBQ92521 554 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
C1orf43-209ENST00000493814 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
C1orf43-209ENST00000493814 PTGER2P43116 358 aa12.34□□□□□ -0.43
C1orf43-209ENST00000493814 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
C1orf43-209ENST00000493814 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
C1orf43-209ENST00000493814 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
C1orf43-209ENST00000493814 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
C1orf43-209ENST00000493814 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
C1orf43-209ENST00000493814 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
C1orf43-209ENST00000493814 DIAPH1O60610 1272 aaKnown RBP12.32□□□□□ -0.44
C1orf43-209ENST00000493814 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
C1orf43-209ENST00000493814 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
C1orf43-209ENST00000493814 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
C1orf43-209ENST00000493814 CICQ96RK0 1608 aaPredicted RBP12.32□□□□□ -0.44
C1orf43-209ENST00000493814 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
C1orf43-209ENST00000493814 TJP1Q07157 1748 aa12.31□□□□□ -0.44
C1orf43-209ENST00000493814 CHD4Q14839 1912 aa12.31□□□□□ -0.44
C1orf43-209ENST00000493814 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
C1orf43-209ENST00000493814 MSH5O43196 834 aa12.3□□□□□ -0.44
C1orf43-209ENST00000493814 HMOX1P09601 288 aa12.3□□□□□ -0.44
C1orf43-209ENST00000493814 SIK1P57059 783 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms