RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 UTRNP46939 3433 aa17.38■□□□□ 0.37
SAMM50-205ENST00000493621 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
SAMM50-205ENST00000493621 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
SAMM50-205ENST00000493621 PNPLA7Q6ZV29 1317 aa17.37■□□□□ 0.37
SAMM50-205ENST00000493621 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
SAMM50-205ENST00000493621 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
SAMM50-205ENST00000493621 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
SAMM50-205ENST00000493621 MEGF6O75095 1541 aa17.36■□□□□ 0.37
SAMM50-205ENST00000493621 POLD1P28340 1107 aa17.35■□□□□ 0.37
SAMM50-205ENST00000493621 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
SAMM50-205ENST00000493621 NSD2O96028 1365 aa17.35■□□□□ 0.37
SAMM50-205ENST00000493621 GPR162Q16538 588 aa17.34■□□□□ 0.37
SAMM50-205ENST00000493621 RTL1A6NKG5 1358 aa17.33■□□□□ 0.36
SAMM50-205ENST00000493621 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
SAMM50-205ENST00000493621 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
SAMM50-205ENST00000493621 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
SAMM50-205ENST00000493621 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SAMM50-205ENST00000493621 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
SAMM50-205ENST00000493621 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
SAMM50-205ENST00000493621 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
SAMM50-205ENST00000493621 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
SAMM50-205ENST00000493621 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
SAMM50-205ENST00000493621 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
SAMM50-205ENST00000493621 USP47Q96K76 1375 aa17.29■□□□□ 0.36
SAMM50-205ENST00000493621 FYB1O15117 783 aa17.29■□□□□ 0.36
SAMM50-205ENST00000493621 MSH5O43196 834 aa17.29■□□□□ 0.36
SAMM50-205ENST00000493621 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
SAMM50-205ENST00000493621 TMF1P82094 1093 aa17.28■□□□□ 0.36
SAMM50-205ENST00000493621 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
SAMM50-205ENST00000493621 C5P01031 1676 aa17.28■□□□□ 0.36
SAMM50-205ENST00000493621 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
SAMM50-205ENST00000493621 TAF1LQ8IZX4 1826 aa17.27■□□□□ 0.36
SAMM50-205ENST00000493621 TATP17735 454 aaPredicted RBP17.27■□□□□ 0.36
SAMM50-205ENST00000493621 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
SAMM50-205ENST00000493621 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
SAMM50-205ENST00000493621 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
SAMM50-205ENST00000493621 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
SAMM50-205ENST00000493621 ITGB4P16144 1822 aa17.25■□□□□ 0.35
SAMM50-205ENST00000493621 MSL1Q68DK7 614 aa17.24■□□□□ 0.35
SAMM50-205ENST00000493621 INSRP06213 1382 aa17.24■□□□□ 0.35
SAMM50-205ENST00000493621 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
SAMM50-205ENST00000493621 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
SAMM50-205ENST00000493621 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
SAMM50-205ENST00000493621 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
SAMM50-205ENST00000493621 FLT4P35916 1363 aa17.23■□□□□ 0.35
SAMM50-205ENST00000493621 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
SAMM50-205ENST00000493621 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
SAMM50-205ENST00000493621 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
SAMM50-205ENST00000493621 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
SAMM50-205ENST00000493621 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
SAMM50-205ENST00000493621 CDCA8Q53HL2 280 aa17.2■□□□□ 0.34
SAMM50-205ENST00000493621 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
SAMM50-205ENST00000493621 CYP27B1O15528 508 aa17.19■□□□□ 0.34
SAMM50-205ENST00000493621 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
SAMM50-205ENST00000493621 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
SAMM50-205ENST00000493621 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
SAMM50-205ENST00000493621 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
SAMM50-205ENST00000493621 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
SAMM50-205ENST00000493621 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
SAMM50-205ENST00000493621 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
SAMM50-205ENST00000493621 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
SAMM50-205ENST00000493621 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
SAMM50-205ENST00000493621 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
SAMM50-205ENST00000493621 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
SAMM50-205ENST00000493621 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-205ENST00000493621 AK7Q96M32 723 aa17.16■□□□□ 0.34
SAMM50-205ENST00000493621 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
SAMM50-205ENST00000493621 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
SAMM50-205ENST00000493621 PIGBQ92521 554 aa17.14■□□□□ 0.33
SAMM50-205ENST00000493621 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
SAMM50-205ENST00000493621 PHF14O94880 888 aa17.13■□□□□ 0.33
SAMM50-205ENST00000493621 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
SAMM50-205ENST00000493621 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
SAMM50-205ENST00000493621 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
SAMM50-205ENST00000493621 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
SAMM50-205ENST00000493621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
SAMM50-205ENST00000493621 EYA1Q99502 592 aa17.1■□□□□ 0.33
SAMM50-205ENST00000493621 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
SAMM50-205ENST00000493621 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
SAMM50-205ENST00000493621 SIK1P57059 783 aa17.09■□□□□ 0.33
SAMM50-205ENST00000493621 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
SAMM50-205ENST00000493621 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
SAMM50-205ENST00000493621 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
SAMM50-205ENST00000493621 SSFA2P28290 1259 aa17.08■□□□□ 0.32
SAMM50-205ENST00000493621 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
SAMM50-205ENST00000493621 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
SAMM50-205ENST00000493621 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
SAMM50-205ENST00000493621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.07■□□□□ 0.32
SAMM50-205ENST00000493621 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
SAMM50-205ENST00000493621 PHKG2P15735 406 aa17.06■□□□□ 0.32
SAMM50-205ENST00000493621 ITPK1Q13572 414 aa17.06■□□□□ 0.32
SAMM50-205ENST00000493621 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
SAMM50-205ENST00000493621 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
SAMM50-205ENST00000493621 GNPATO15228 680 aa17.05■□□□□ 0.32
SAMM50-205ENST00000493621 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
SAMM50-205ENST00000493621 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-205ENST00000493621 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-205ENST00000493621 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
SAMM50-205ENST00000493621 ADCY9O60503 1353 aa17.04■□□□□ 0.32
SAMM50-205ENST00000493621 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms