RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
ATG4B-223ENST00000493618 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
ATG4B-223ENST00000493618 ZCRB1Q8TBF4 217 aaKnown RBP20.31■□□□□ 0.84
ATG4B-223ENST00000493618 PPP1R1BQ9UD71 204 aaPredicted RBP20.31■□□□□ 0.84
ATG4B-223ENST00000493618 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
ATG4B-223ENST00000493618 FLT4P35916 1363 aa20.31■□□□□ 0.84
ATG4B-223ENST00000493618 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
ATG4B-223ENST00000493618 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
ATG4B-223ENST00000493618 SYTL4Q96C24 671 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-223ENST00000493618 INSRP06213 1382 aa20.3■□□□□ 0.84
ATG4B-223ENST00000493618 LY75O60449 1722 aa20.3■□□□□ 0.84
ATG4B-223ENST00000493618 TUBGCP6Q96RT7 1819 aa20.3■□□□□ 0.84
ATG4B-223ENST00000493618 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-223ENST00000493618 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
ATG4B-223ENST00000493618 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.84
ATG4B-223ENST00000493618 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
ATG4B-223ENST00000493618 ATF5Q9Y2D1 282 aaPredicted RBP20.27■□□□□ 0.84
ATG4B-223ENST00000493618 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-223ENST00000493618 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
ATG4B-223ENST00000493618 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
ATG4B-223ENST00000493618 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
ATG4B-223ENST00000493618 ITGB4P16144 1822 aa20.25■□□□□ 0.83
ATG4B-223ENST00000493618 NSD2O96028 1365 aa20.25■□□□□ 0.83
ATG4B-223ENST00000493618 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
ATG4B-223ENST00000493618 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
ATG4B-223ENST00000493618 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
ATG4B-223ENST00000493618 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
ATG4B-223ENST00000493618 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-223ENST00000493618 KCNQ4P56696 695 aa20.24■□□□□ 0.83
ATG4B-223ENST00000493618 PANK3Q9H999 370 aa20.21■□□□□ 0.83
ATG4B-223ENST00000493618 PTGER2P43116 358 aa20.2■□□□□ 0.82
ATG4B-223ENST00000493618 POLKQ9UBT6 870 aa20.19■□□□□ 0.82
ATG4B-223ENST00000493618 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
ATG4B-223ENST00000493618 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
ATG4B-223ENST00000493618 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
ATG4B-223ENST00000493618 TAF1LQ8IZX4 1826 aa20.18■□□□□ 0.82
ATG4B-223ENST00000493618 SLC27A3Q5K4L6 730 aa20.18■□□□□ 0.82
ATG4B-223ENST00000493618 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
ATG4B-223ENST00000493618 C5P01031 1676 aa20.18■□□□□ 0.82
ATG4B-223ENST00000493618 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
ATG4B-223ENST00000493618 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
ATG4B-223ENST00000493618 CYP27B1O15528 508 aa20.16■□□□□ 0.82
ATG4B-223ENST00000493618 EYA1Q99502 592 aa20.16■□□□□ 0.82
ATG4B-223ENST00000493618 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
ATG4B-223ENST00000493618 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
ATG4B-223ENST00000493618 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
ATG4B-223ENST00000493618 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
ATG4B-223ENST00000493618 EIF4A2Q14240 407 aaKnown RBP20.13■□□□□ 0.81
ATG4B-223ENST00000493618 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
ATG4B-223ENST00000493618 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
ATG4B-223ENST00000493618 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
ATG4B-223ENST00000493618 SPG7Q9UQ90 795 aa20.11■□□□□ 0.81
ATG4B-223ENST00000493618 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
ATG4B-223ENST00000493618 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
ATG4B-223ENST00000493618 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
ATG4B-223ENST00000493618 ARXQ96QS3 562 aa20.09■□□□□ 0.81
ATG4B-223ENST00000493618 SYT17Q9BSW7 474 aa20.08■□□□□ 0.81
ATG4B-223ENST00000493618 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
ATG4B-223ENST00000493618 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
ATG4B-223ENST00000493618 MSH5O43196 834 aa20.07■□□□□ 0.8
ATG4B-223ENST00000493618 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-223ENST00000493618 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
ATG4B-223ENST00000493618 PIGBQ92521 554 aa20.06■□□□□ 0.8
ATG4B-223ENST00000493618 KNSTRNQ9Y448 316 aa20.06■□□□□ 0.8
ATG4B-223ENST00000493618 PHKG2P15735 406 aa20.05■□□□□ 0.8
ATG4B-223ENST00000493618 YY1P25490 414 aa20.05■□□□□ 0.8
ATG4B-223ENST00000493618 SLC16A10Q8TF71 515 aa20.05■□□□□ 0.8
ATG4B-223ENST00000493618 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
ATG4B-223ENST00000493618 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
ATG4B-223ENST00000493618 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
ATG4B-223ENST00000493618 IFNL2Q8IZJ0 200 aa20.04■□□□□ 0.8
ATG4B-223ENST00000493618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATG4B-223ENST00000493618 POLD1P28340 1107 aa20.02■□□□□ 0.8
ATG4B-223ENST00000493618 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
ATG4B-223ENST00000493618 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
ATG4B-223ENST00000493618 MSL1Q68DK7 614 aa20.01■□□□□ 0.79
ATG4B-223ENST00000493618 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
ATG4B-223ENST00000493618 CHD4Q14839 1912 aa20.01■□□□□ 0.79
ATG4B-223ENST00000493618 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
ATG4B-223ENST00000493618 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
ATG4B-223ENST00000493618 SMIM5Q71RC9 77 aa20■□□□□ 0.79
ATG4B-223ENST00000493618 ASAP1Q9ULH1 1129 aa20■□□□□ 0.79
ATG4B-223ENST00000493618 AMIGO3Q86WK7 504 aa19.98■□□□□ 0.79
ATG4B-223ENST00000493618 AK7Q96M32 723 aa19.98■□□□□ 0.79
ATG4B-223ENST00000493618 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
ATG4B-223ENST00000493618 PHF14O94880 888 aa19.97■□□□□ 0.79
ATG4B-223ENST00000493618 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-223ENST00000493618 PLEKHO1Q53GL0 409 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-223ENST00000493618 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-223ENST00000493618 LOC102724428A0A0B4J2F2 783 aa19.96■□□□□ 0.79
ATG4B-223ENST00000493618 SIK1P57059 783 aa19.96■□□□□ 0.79
ATG4B-223ENST00000493618 CC2D1BQ5T0F9 858 aaKnown RBP19.96■□□□□ 0.79
ATG4B-223ENST00000493618 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
ATG4B-223ENST00000493618 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
ATG4B-223ENST00000493618 ATG3Q9NT62 314 aa19.96■□□□□ 0.79
ATG4B-223ENST00000493618 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
ATG4B-223ENST00000493618 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-223ENST00000493618 IL13P35225 146 aa19.95■□□□□ 0.78
ATG4B-223ENST00000493618 NLGN2Q8NFZ4 835 aa19.95■□□□□ 0.78
ATG4B-223ENST00000493618 COL5A3P25940 1745 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms