RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
NUDCD3-210ENST00000493613 C5P01031 1676 aa14.38□□□□□ -0.11
NUDCD3-210ENST00000493613 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
NUDCD3-210ENST00000493613 SMG6Q86US8 1419 aaKnown RBP14.37□□□□□ -0.11
NUDCD3-210ENST00000493613 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
NUDCD3-210ENST00000493613 FYB1O15117 783 aa14.36□□□□□ -0.11
NUDCD3-210ENST00000493613 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
NUDCD3-210ENST00000493613 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
NUDCD3-210ENST00000493613 LRRC4BQ9NT99 713 aa14.36□□□□□ -0.11
NUDCD3-210ENST00000493613 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
NUDCD3-210ENST00000493613 ZCRB1Q8TBF4 217 aaKnown RBP14.35□□□□□ -0.11
NUDCD3-210ENST00000493613 TOGARAM1Q9Y4F4 1720 aa14.35□□□□□ -0.11
NUDCD3-210ENST00000493613 CDCA8Q53HL2 280 aa14.34□□□□□ -0.11
NUDCD3-210ENST00000493613 SLC27A3Q5K4L6 730 aa14.34□□□□□ -0.11
NUDCD3-210ENST00000493613 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
NUDCD3-210ENST00000493613 FHDC1Q9C0D6 1143 aaPredicted RBP14.34□□□□□ -0.11
NUDCD3-210ENST00000493613 NSD2O96028 1365 aa14.34□□□□□ -0.11
NUDCD3-210ENST00000493613 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
NUDCD3-210ENST00000493613 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
NUDCD3-210ENST00000493613 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.12
NUDCD3-210ENST00000493613 NBPF4Q96M43 638 aa14.33□□□□□ -0.12
NUDCD3-210ENST00000493613 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
NUDCD3-210ENST00000493613 USHBP1Q8N6Y0 703 aa14.32□□□□□ -0.12
NUDCD3-210ENST00000493613 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
NUDCD3-210ENST00000493613 CGNL1Q0VF96 1302 aa14.32□□□□□ -0.12
NUDCD3-210ENST00000493613 INSRP06213 1382 aa14.32□□□□□ -0.12
NUDCD3-210ENST00000493613 FLT4P35916 1363 aa14.32□□□□□ -0.12
NUDCD3-210ENST00000493613 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
NUDCD3-210ENST00000493613 ARXQ96QS3 562 aa14.31□□□□□ -0.12
NUDCD3-210ENST00000493613 KIF24Q5T7B8 1368 aa14.31□□□□□ -0.12
NUDCD3-210ENST00000493613 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
NUDCD3-210ENST00000493613 KCNQ4P56696 695 aa14.3□□□□□ -0.12
NUDCD3-210ENST00000493613 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
NUDCD3-210ENST00000493613 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
NUDCD3-210ENST00000493613 SLC16A10Q8TF71 515 aa14.29□□□□□ -0.12
NUDCD3-210ENST00000493613 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
NUDCD3-210ENST00000493613 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
NUDCD3-210ENST00000493613 MAP3K5Q99683 1374 aa14.29□□□□□ -0.12
NUDCD3-210ENST00000493613 CARD14Q9BXL6 1004 aa14.28□□□□□ -0.12
NUDCD3-210ENST00000493613 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
NUDCD3-210ENST00000493613 PCDH11XQ9BZA7 1347 aa14.28□□□□□ -0.12
NUDCD3-210ENST00000493613 PCDH11YQ9BZA8 1340 aa14.28□□□□□ -0.12
NUDCD3-210ENST00000493613 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.12
NUDCD3-210ENST00000493613 C4BP0C0L5 1744 aa14.27□□□□□ -0.12
NUDCD3-210ENST00000493613 CCNL1Q9UK58 526 aaPredicted RBP14.27□□□□□ -0.13
NUDCD3-210ENST00000493613 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
NUDCD3-210ENST00000493613 EMILIN1Q9Y6C2 1016 aa14.26□□□□□ -0.13
NUDCD3-210ENST00000493613 POLD1P28340 1107 aa14.25□□□□□ -0.13
NUDCD3-210ENST00000493613 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
NUDCD3-210ENST00000493613 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
NUDCD3-210ENST00000493613 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
NUDCD3-210ENST00000493613 PPM1GO15355 546 aaPredicted RBP14.24□□□□□ -0.13
NUDCD3-210ENST00000493613 PALLDQ8WX93 1383 aa14.22□□□□□ -0.13
NUDCD3-210ENST00000493613 CYP27B1O15528 508 aa14.22□□□□□ -0.13
NUDCD3-210ENST00000493613 MSH5O43196 834 aa14.22□□□□□ -0.13
NUDCD3-210ENST00000493613 MPRIPQ6WCQ1 1025 aa14.22□□□□□ -0.13
NUDCD3-210ENST00000493613 GPR162Q16538 588 aa14.21□□□□□ -0.13
NUDCD3-210ENST00000493613 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
NUDCD3-210ENST00000493613 VIRMAQ69YN4 1812 aaKnown RBP14.2□□□□□ -0.14
NUDCD3-210ENST00000493613 WASHC2AQ641Q2 1341 aa14.2□□□□□ -0.14
NUDCD3-210ENST00000493613 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
NUDCD3-210ENST00000493613 POLR3GLQ9BT43 218 aa14.2□□□□□ -0.14
NUDCD3-210ENST00000493613 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
NUDCD3-210ENST00000493613 SPG7Q9UQ90 795 aa14.19□□□□□ -0.14
NUDCD3-210ENST00000493613 ZNF831Q5JPB2 1677 aa14.18□□□□□ -0.14
NUDCD3-210ENST00000493613 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
NUDCD3-210ENST00000493613 NLGN2Q8NFZ4 835 aa14.18□□□□□ -0.14
NUDCD3-210ENST00000493613 EYA1Q99502 592 aa14.18□□□□□ -0.14
NUDCD3-210ENST00000493613 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
NUDCD3-210ENST00000493613 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-210ENST00000493613 MSL1Q68DK7 614 aa14.17□□□□□ -0.14
NUDCD3-210ENST00000493613 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-210ENST00000493613 POLKQ9UBT6 870 aa14.17□□□□□ -0.14
NUDCD3-210ENST00000493613 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
NUDCD3-210ENST00000493613 FLAD1Q8NFF5 587 aa14.16□□□□□ -0.14
NUDCD3-210ENST00000493613 PIGBQ92521 554 aa14.16□□□□□ -0.14
NUDCD3-210ENST00000493613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUDCD3-210ENST00000493613 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUDCD3-210ENST00000493613 AK7Q96M32 723 aa14.15□□□□□ -0.14
NUDCD3-210ENST00000493613 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-210ENST00000493613 TMOD3Q9NYL9 352 aa14.14□□□□□ -0.15
NUDCD3-210ENST00000493613 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
NUDCD3-210ENST00000493613 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 C4AP0C0L4 1744 aa14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 PLEKHG2Q9H7P9 1386 aa14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 PHKG2P15735 406 aa14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 IFNL2Q8IZJ0 200 aa14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 CCER1Q8TC90 406 aaPredicted RBP14.13□□□□□ -0.15
NUDCD3-210ENST00000493613 LOC102724428A0A0B4J2F2 783 aa14.12□□□□□ -0.15
NUDCD3-210ENST00000493613 PHF14O94880 888 aa14.12□□□□□ -0.15
NUDCD3-210ENST00000493613 SIK1P57059 783 aa14.12□□□□□ -0.15
NUDCD3-210ENST00000493613 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 AMIGO3Q86WK7 504 aa14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 PANK3Q9H999 370 aa14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 ASAP1Q9ULH1 1129 aa14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
NUDCD3-210ENST00000493613 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms