RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 AMPHP49418 695 aa14.25□□□□□ -0.13
SOX2-OT-215ENST00000493521 SGIP1Q9BQI5 828 aa14.25□□□□□ -0.13
SOX2-OT-215ENST00000493521 PPP1R1BQ9UD71 204 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-215ENST00000493521 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
SOX2-OT-215ENST00000493521 STK32BQ9NY57 414 aa14.24□□□□□ -0.13
SOX2-OT-215ENST00000493521 NINLQ9Y2I6 1382 aa14.23□□□□□ -0.13
SOX2-OT-215ENST00000493521 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
SOX2-OT-215ENST00000493521 EMILIN1Q9Y6C2 1016 aa14.23□□□□□ -0.13
SOX2-OT-215ENST00000493521 TMF1P82094 1093 aa14.22□□□□□ -0.13
SOX2-OT-215ENST00000493521 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
SOX2-OT-215ENST00000493521 SYTL4Q96C24 671 aaPredicted RBP14.21□□□□□ -0.13
SOX2-OT-215ENST00000493521 FHDC1Q9C0D6 1143 aaPredicted RBP14.21□□□□□ -0.13
SOX2-OT-215ENST00000493521 NSD3Q9BZ95 1437 aa14.21□□□□□ -0.13
SOX2-OT-215ENST00000493521 LY75O60449 1722 aa14.21□□□□□ -0.14
SOX2-OT-215ENST00000493521 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.14
SOX2-OT-215ENST00000493521 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
SOX2-OT-215ENST00000493521 ZCRB1Q8TBF4 217 aaKnown RBP14.19□□□□□ -0.14
SOX2-OT-215ENST00000493521 PNPLA7Q6ZV29 1317 aa14.18□□□□□ -0.14
SOX2-OT-215ENST00000493521 YY1P25490 414 aa14.18□□□□□ -0.14
SOX2-OT-215ENST00000493521 SMIM5Q71RC9 77 aa14.18□□□□□ -0.14
SOX2-OT-215ENST00000493521 SYT17Q9BSW7 474 aa14.18□□□□□ -0.14
SOX2-OT-215ENST00000493521 RTL1A6NKG5 1358 aa14.18□□□□□ -0.14
SOX2-OT-215ENST00000493521 GOLGB1Q14789 3259 aaKnown RBP14.17□□□□□ -0.14
SOX2-OT-215ENST00000493521 MTFR1LQ9H019 292 aa14.17□□□□□ -0.14
SOX2-OT-215ENST00000493521 CYP27B1O15528 508 aa14.16□□□□□ -0.14
SOX2-OT-215ENST00000493521 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
SOX2-OT-215ENST00000493521 POLR3GLQ9BT43 218 aa14.16□□□□□ -0.14
SOX2-OT-215ENST00000493521 INSRP06213 1382 aa14.16□□□□□ -0.14
SOX2-OT-215ENST00000493521 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
SOX2-OT-215ENST00000493521 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
SOX2-OT-215ENST00000493521 FLT4P35916 1363 aa14.14□□□□□ -0.15
SOX2-OT-215ENST00000493521 MAP2P11137 1827 aaKnown RBP14.14□□□□□ -0.15
SOX2-OT-215ENST00000493521 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
SOX2-OT-215ENST00000493521 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
SOX2-OT-215ENST00000493521 ITGB4P16144 1822 aa14.13□□□□□ -0.15
SOX2-OT-215ENST00000493521 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
SOX2-OT-215ENST00000493521 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
SOX2-OT-215ENST00000493521 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
SOX2-OT-215ENST00000493521 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
SOX2-OT-215ENST00000493521 ARXQ96QS3 562 aa14.12□□□□□ -0.15
SOX2-OT-215ENST00000493521 NCAPD2Q15021 1401 aa14.12□□□□□ -0.15
SOX2-OT-215ENST00000493521 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 EYA1Q99502 592 aa14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 POLKQ9UBT6 870 aa14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 CCNL1Q9UK58 526 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-215ENST00000493521 C5P01031 1676 aa14.1□□□□□ -0.15
SOX2-OT-215ENST00000493521 SLC27A3Q5K4L6 730 aa14.1□□□□□ -0.15
SOX2-OT-215ENST00000493521 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
SOX2-OT-215ENST00000493521 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
SOX2-OT-215ENST00000493521 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
SOX2-OT-215ENST00000493521 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-215ENST00000493521 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
SOX2-OT-215ENST00000493521 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.16
SOX2-OT-215ENST00000493521 PALLDQ8WX93 1383 aa14.08□□□□□ -0.16
SOX2-OT-215ENST00000493521 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 PIGBQ92521 554 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 PANK3Q9H999 370 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 PCDH11XQ9BZA7 1347 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 PCDH11YQ9BZA8 1340 aa14.07□□□□□ -0.16
SOX2-OT-215ENST00000493521 C4BP0C0L5 1744 aa14.06□□□□□ -0.16
SOX2-OT-215ENST00000493521 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
SOX2-OT-215ENST00000493521 ZNF784Q8NCA9 323 aaPredicted RBP14.05□□□□□ -0.16
SOX2-OT-215ENST00000493521 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
SOX2-OT-215ENST00000493521 MAP3K5Q99683 1374 aa14.05□□□□□ -0.16
SOX2-OT-215ENST00000493521 MSH5O43196 834 aa14.04□□□□□ -0.16
SOX2-OT-215ENST00000493521 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
SOX2-OT-215ENST00000493521 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
SOX2-OT-215ENST00000493521 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
SOX2-OT-215ENST00000493521 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 EIF4G2P78344 907 aaKnown RBP eCLIP14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 ITPK1Q13572 414 aa14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
SOX2-OT-215ENST00000493521 PHKG2P15735 406 aa14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 ADRA2BP18089 450 aa14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 CHD4Q14839 1912 aa14.02□□□□□ -0.17
SOX2-OT-215ENST00000493521 PHF14O94880 888 aa14.01□□□□□ -0.17
SOX2-OT-215ENST00000493521 POLD1P28340 1107 aa14□□□□□ -0.17
SOX2-OT-215ENST00000493521 GPR162Q16538 588 aa14□□□□□ -0.17
SOX2-OT-215ENST00000493521 ATG3Q9NT62 314 aa14□□□□□ -0.17
SOX2-OT-215ENST00000493521 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-215ENST00000493521 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
SOX2-OT-215ENST00000493521 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
SOX2-OT-215ENST00000493521 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
SOX2-OT-215ENST00000493521 SIK1P57059 783 aa13.98□□□□□ -0.17
SOX2-OT-215ENST00000493521 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
SOX2-OT-215ENST00000493521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-215ENST00000493521 KDRP35968 1356 aa13.96□□□□□ -0.17
SOX2-OT-215ENST00000493521 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
SOX2-OT-215ENST00000493521 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms