RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 ARXQ96QS3 562 aa18.85■□□□□ 0.61
TRIM50-204ENST00000493498 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
TRIM50-204ENST00000493498 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.61
TRIM50-204ENST00000493498 ZCRB1Q8TBF4 217 aaKnown RBP18.83■□□□□ 0.6
TRIM50-204ENST00000493498 ZNF827Q17R98 1081 aa18.82■□□□□ 0.6
TRIM50-204ENST00000493498 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
TRIM50-204ENST00000493498 LY75O60449 1722 aa18.82■□□□□ 0.6
TRIM50-204ENST00000493498 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
TRIM50-204ENST00000493498 POLD1P28340 1107 aa18.81■□□□□ 0.6
TRIM50-204ENST00000493498 AKT1S1Q96B36 256 aa18.81■□□□□ 0.6
TRIM50-204ENST00000493498 SYTL4Q96C24 671 aaPredicted RBP18.81■□□□□ 0.6
TRIM50-204ENST00000493498 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
TRIM50-204ENST00000493498 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
TRIM50-204ENST00000493498 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
TRIM50-204ENST00000493498 USP47Q96K76 1375 aa18.8■□□□□ 0.6
TRIM50-204ENST00000493498 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
TRIM50-204ENST00000493498 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
TRIM50-204ENST00000493498 TFCP2L1Q9NZI6 479 aa18.79■□□□□ 0.6
TRIM50-204ENST00000493498 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
TRIM50-204ENST00000493498 MEGF6O75095 1541 aa18.79■□□□□ 0.6
TRIM50-204ENST00000493498 FYB1O15117 783 aa18.78■□□□□ 0.6
TRIM50-204ENST00000493498 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
TRIM50-204ENST00000493498 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
TRIM50-204ENST00000493498 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
TRIM50-204ENST00000493498 INSRP06213 1382 aa18.76■□□□□ 0.59
TRIM50-204ENST00000493498 FLT4P35916 1363 aa18.76■□□□□ 0.59
TRIM50-204ENST00000493498 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
TRIM50-204ENST00000493498 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
TRIM50-204ENST00000493498 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
TRIM50-204ENST00000493498 NBPF6Q5VWK0 638 aa18.75■□□□□ 0.59
TRIM50-204ENST00000493498 NBPF4Q96M43 638 aa18.75■□□□□ 0.59
TRIM50-204ENST00000493498 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
TRIM50-204ENST00000493498 NSD2O96028 1365 aa18.75■□□□□ 0.59
TRIM50-204ENST00000493498 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
TRIM50-204ENST00000493498 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
TRIM50-204ENST00000493498 FBLN1P23142 703 aa18.74■□□□□ 0.59
TRIM50-204ENST00000493498 ZNF784Q8NCA9 323 aaPredicted RBP18.73■□□□□ 0.59
TRIM50-204ENST00000493498 EIF4G2P78344 907 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM50-204ENST00000493498 GPR162Q16538 588 aa18.72■□□□□ 0.59
TRIM50-204ENST00000493498 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
TRIM50-204ENST00000493498 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
TRIM50-204ENST00000493498 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
TRIM50-204ENST00000493498 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
TRIM50-204ENST00000493498 C5P01031 1676 aa18.69■□□□□ 0.58
TRIM50-204ENST00000493498 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
TRIM50-204ENST00000493498 PKD1L3Q7Z443 1732 aa18.67■□□□□ 0.58
TRIM50-204ENST00000493498 MSH5O43196 834 aa18.67■□□□□ 0.58
TRIM50-204ENST00000493498 KCNQ4P56696 695 aa18.67■□□□□ 0.58
TRIM50-204ENST00000493498 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
TRIM50-204ENST00000493498 TAF1LQ8IZX4 1826 aa18.66■□□□□ 0.58
TRIM50-204ENST00000493498 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
TRIM50-204ENST00000493498 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
TRIM50-204ENST00000493498 ITGB4P16144 1822 aa18.65■□□□□ 0.58
TRIM50-204ENST00000493498 UTRNP46939 3433 aa18.64■□□□□ 0.57
TRIM50-204ENST00000493498 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
TRIM50-204ENST00000493498 COL23A1Q86Y22 540 aaPredicted RBP18.64■□□□□ 0.57
TRIM50-204ENST00000493498 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
TRIM50-204ENST00000493498 NCAPD2Q15021 1401 aa18.64■□□□□ 0.57
TRIM50-204ENST00000493498 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
TRIM50-204ENST00000493498 MPRIPQ6WCQ1 1025 aa18.63■□□□□ 0.57
TRIM50-204ENST00000493498 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
TRIM50-204ENST00000493498 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
TRIM50-204ENST00000493498 CYP27B1O15528 508 aa18.62■□□□□ 0.57
TRIM50-204ENST00000493498 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
TRIM50-204ENST00000493498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRIM50-204ENST00000493498 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
TRIM50-204ENST00000493498 PLEKHG2Q9H7P9 1386 aa18.62■□□□□ 0.57
TRIM50-204ENST00000493498 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
TRIM50-204ENST00000493498 EMILIN1Q9Y6C2 1016 aa18.61■□□□□ 0.57
TRIM50-204ENST00000493498 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
TRIM50-204ENST00000493498 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
TRIM50-204ENST00000493498 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
TRIM50-204ENST00000493498 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
TRIM50-204ENST00000493498 AK7Q96M32 723 aa18.6■□□□□ 0.57
TRIM50-204ENST00000493498 CD2APQ9Y5K6 639 aa18.6■□□□□ 0.57
TRIM50-204ENST00000493498 C1QTNF8P60827 252 aa18.58■□□□□ 0.56
TRIM50-204ENST00000493498 UBR3Q6ZT12 1888 aa18.57■□□□□ 0.56
TRIM50-204ENST00000493498 GIGYF1O75420 1035 aaPredicted RBP18.56■□□□□ 0.56
TRIM50-204ENST00000493498 MSL1Q68DK7 614 aa18.56■□□□□ 0.56
TRIM50-204ENST00000493498 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
TRIM50-204ENST00000493498 PIGBQ92521 554 aa18.56■□□□□ 0.56
TRIM50-204ENST00000493498 TMOD3Q9NYL9 352 aa18.56■□□□□ 0.56
TRIM50-204ENST00000493498 SSFA2P28290 1259 aa18.55■□□□□ 0.56
TRIM50-204ENST00000493498 EYA1Q99502 592 aa18.55■□□□□ 0.56
TRIM50-204ENST00000493498 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
TRIM50-204ENST00000493498 SIK1P57059 783 aa18.54■□□□□ 0.56
TRIM50-204ENST00000493498 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
TRIM50-204ENST00000493498 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
TRIM50-204ENST00000493498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
TRIM50-204ENST00000493498 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
TRIM50-204ENST00000493498 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
TRIM50-204ENST00000493498 PHKG2P15735 406 aa18.51■□□□□ 0.55
TRIM50-204ENST00000493498 GOLGB1Q14789 3259 aaKnown RBP18.5■□□□□ 0.55
TRIM50-204ENST00000493498 PHF14O94880 888 aa18.5■□□□□ 0.55
TRIM50-204ENST00000493498 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
TRIM50-204ENST00000493498 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
TRIM50-204ENST00000493498 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
TRIM50-204ENST00000493498 EIF4A2Q14240 407 aaKnown RBP18.48■□□□□ 0.55
TRIM50-204ENST00000493498 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
TRIM50-204ENST00000493498 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms