RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
LSM2-214ENST00000493387 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
LSM2-214ENST00000493387 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
LSM2-214ENST00000493387 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
LSM2-214ENST00000493387 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
LSM2-214ENST00000493387 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
LSM2-214ENST00000493387 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
LSM2-214ENST00000493387 DISP2A7MBM2 1401 aa15.3■□□□□ 0.04
LSM2-214ENST00000493387 EXOC5O00471 708 aa15.3■□□□□ 0.04
LSM2-214ENST00000493387 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
LSM2-214ENST00000493387 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
LSM2-214ENST00000493387 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
LSM2-214ENST00000493387 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
LSM2-214ENST00000493387 OVOS2A0A0G2JMS6 1433 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 A0A0G2JS52 829 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 MYT1Q01538 1121 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 DDB1Q16531 1140 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 GLI3P10071 1580 aa15.28■□□□□ 0.04
LSM2-214ENST00000493387 MEGF6O75095 1541 aa15.27■□□□□ 0.04
LSM2-214ENST00000493387 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
LSM2-214ENST00000493387 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
LSM2-214ENST00000493387 PARP4Q9UKK3 1724 aaKnown RBP15.26■□□□□ 0.03
LSM2-214ENST00000493387 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
LSM2-214ENST00000493387 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 CCDC146Q8IYE0 955 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 PHACTR3Q96KR7 559 aa15.25■□□□□ 0.03
LSM2-214ENST00000493387 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
LSM2-214ENST00000493387 MTHFSDQ2M296 383 aaKnown RBP15.24■□□□□ 0.03
LSM2-214ENST00000493387 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
LSM2-214ENST00000493387 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
LSM2-214ENST00000493387 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
LSM2-214ENST00000493387 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
LSM2-214ENST00000493387 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
LSM2-214ENST00000493387 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
LSM2-214ENST00000493387 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
LSM2-214ENST00000493387 WNK3Q9BYP7 1800 aa15.22■□□□□ 0.03
LSM2-214ENST00000493387 APAF1O14727 1248 aa15.22■□□□□ 0.03
LSM2-214ENST00000493387 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
LSM2-214ENST00000493387 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
LSM2-214ENST00000493387 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
LSM2-214ENST00000493387 GNAT3A8MTJ3 354 aa15.21■□□□□ 0.03
LSM2-214ENST00000493387 PHKG2P15735 406 aa15.21■□□□□ 0.03
LSM2-214ENST00000493387 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
LSM2-214ENST00000493387 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
LSM2-214ENST00000493387 CYP27B1O15528 508 aa15.2■□□□□ 0.02
LSM2-214ENST00000493387 RIPK4P57078 832 aa15.2■□□□□ 0.02
LSM2-214ENST00000493387 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
LSM2-214ENST00000493387 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
LSM2-214ENST00000493387 DCAF5Q96JK2 942 aa15.19■□□□□ 0.02
LSM2-214ENST00000493387 MAP3K5Q99683 1374 aa15.19■□□□□ 0.02
LSM2-214ENST00000493387 LRRC37A3O60309 1634 aa15.18■□□□□ 0.02
LSM2-214ENST00000493387 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
LSM2-214ENST00000493387 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
LSM2-214ENST00000493387 RGS12O14924 1447 aa15.17■□□□□ 0.02
LSM2-214ENST00000493387 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
LSM2-214ENST00000493387 BCL9O00512 1426 aa15.17■□□□□ 0.02
LSM2-214ENST00000493387 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
LSM2-214ENST00000493387 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
LSM2-214ENST00000493387 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
LSM2-214ENST00000493387 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
LSM2-214ENST00000493387 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
LSM2-214ENST00000493387 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
LSM2-214ENST00000493387 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
LSM2-214ENST00000493387 HNRNPUQ00839 825 aaKnown RBP eCLIP15.13■□□□□ 0.01
LSM2-214ENST00000493387 IL17REQ8NFR9 667 aa15.13■□□□□ 0.01
LSM2-214ENST00000493387 CEMIPQ8WUJ3 1361 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 CABP4P57796 275 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 TEFQ10587 303 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 WDR63Q8IWG1 891 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
LSM2-214ENST00000493387 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
LSM2-214ENST00000493387 MCM10Q7L590 875 aa15.11■□□□□ 0.01
LSM2-214ENST00000493387 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
LSM2-214ENST00000493387 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
LSM2-214ENST00000493387 SLC52A2Q9HAB3 445 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 BABAM1Q9NWV8 329 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 IL16Q14005 1332 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 BRWD3Q6RI45 1802 aa15.1■□□□□ 0.01
LSM2-214ENST00000493387 PRIM1P49642 420 aaKnown RBP15.09■□□□□ 0.01
LSM2-214ENST00000493387 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
LSM2-214ENST00000493387 FAM182BQ5T319 152 aa15.08■□□□□ 0
LSM2-214ENST00000493387 NFATC2IPQ8NCF5 419 aa15.08■□□□□ 0
LSM2-214ENST00000493387 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
LSM2-214ENST00000493387 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
LSM2-214ENST00000493387 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
LSM2-214ENST00000493387 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
LSM2-214ENST00000493387 GNAI1P63096 354 aa15.07■□□□□ 0
LSM2-214ENST00000493387 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
LSM2-214ENST00000493387 ACSBG1Q96GR2 724 aa15.07■□□□□ 0
LSM2-214ENST00000493387 THUMPD2Q9BTF0 503 aaKnown RBP15.07■□□□□ 0
LSM2-214ENST00000493387 IFT57Q9NWB7 429 aa15.07■□□□□ 0
LSM2-214ENST00000493387 ZBED9Q6R2W3 1325 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms