RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 INSRP06213 1382 aa18.53■□□□□ 0.56
SNED1-212ENST00000493358 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
SNED1-212ENST00000493358 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
SNED1-212ENST00000493358 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNED1-212ENST00000493358 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
SNED1-212ENST00000493358 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
SNED1-212ENST00000493358 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SNED1-212ENST00000493358 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
SNED1-212ENST00000493358 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
SNED1-212ENST00000493358 ITGB4P16144 1822 aa18.49■□□□□ 0.55
SNED1-212ENST00000493358 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
SNED1-212ENST00000493358 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
SNED1-212ENST00000493358 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
SNED1-212ENST00000493358 NBPF6Q5VWK0 638 aa18.48■□□□□ 0.55
SNED1-212ENST00000493358 NBPF4Q96M43 638 aa18.48■□□□□ 0.55
SNED1-212ENST00000493358 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
SNED1-212ENST00000493358 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
SNED1-212ENST00000493358 ZBTB7AO95365 584 aa18.47■□□□□ 0.55
SNED1-212ENST00000493358 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
SNED1-212ENST00000493358 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
SNED1-212ENST00000493358 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
SNED1-212ENST00000493358 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
SNED1-212ENST00000493358 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
SNED1-212ENST00000493358 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
SNED1-212ENST00000493358 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
SNED1-212ENST00000493358 MTFR1LQ9H019 292 aa18.44■□□□□ 0.54
SNED1-212ENST00000493358 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
SNED1-212ENST00000493358 PDGFDQ9GZP0 370 aaPredicted RBP18.43■□□□□ 0.54
SNED1-212ENST00000493358 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
SNED1-212ENST00000493358 C5P01031 1676 aa18.43■□□□□ 0.54
SNED1-212ENST00000493358 TOGARAM1Q9Y4F4 1720 aa18.42■□□□□ 0.54
SNED1-212ENST00000493358 CHD4Q14839 1912 aa18.4■□□□□ 0.54
SNED1-212ENST00000493358 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
SNED1-212ENST00000493358 NSD2O96028 1365 aa18.4■□□□□ 0.54
SNED1-212ENST00000493358 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
SNED1-212ENST00000493358 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
SNED1-212ENST00000493358 LRRC4BQ9NT99 713 aa18.39■□□□□ 0.53
SNED1-212ENST00000493358 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
SNED1-212ENST00000493358 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
SNED1-212ENST00000493358 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
SNED1-212ENST00000493358 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
SNED1-212ENST00000493358 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
SNED1-212ENST00000493358 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
SNED1-212ENST00000493358 PTGER2P43116 358 aa18.37■□□□□ 0.53
SNED1-212ENST00000493358 PANK3Q9H999 370 aa18.37■□□□□ 0.53
SNED1-212ENST00000493358 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
SNED1-212ENST00000493358 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
SNED1-212ENST00000493358 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
SNED1-212ENST00000493358 POLD1P28340 1107 aa18.34■□□□□ 0.53
SNED1-212ENST00000493358 MPRIPQ6WCQ1 1025 aa18.34■□□□□ 0.53
SNED1-212ENST00000493358 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
SNED1-212ENST00000493358 CYP27B1O15528 508 aa18.33■□□□□ 0.52
SNED1-212ENST00000493358 KCNQ4P56696 695 aa18.33■□□□□ 0.52
SNED1-212ENST00000493358 ARXQ96QS3 562 aa18.33■□□□□ 0.52
SNED1-212ENST00000493358 EYA1Q99502 592 aa18.33■□□□□ 0.52
SNED1-212ENST00000493358 FHDC1Q9C0D6 1143 aaPredicted RBP18.33■□□□□ 0.52
SNED1-212ENST00000493358 PNPLA7Q6ZV29 1317 aa18.32■□□□□ 0.52
SNED1-212ENST00000493358 YY1P25490 414 aa18.32■□□□□ 0.52
SNED1-212ENST00000493358 SMARCC1Q92922 1105 aaPredicted RBP18.32■□□□□ 0.52
SNED1-212ENST00000493358 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
SNED1-212ENST00000493358 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
SNED1-212ENST00000493358 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
SNED1-212ENST00000493358 MSH5O43196 834 aa18.31■□□□□ 0.52
SNED1-212ENST00000493358 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
SNED1-212ENST00000493358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNED1-212ENST00000493358 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
SNED1-212ENST00000493358 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
SNED1-212ENST00000493358 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
SNED1-212ENST00000493358 SYT17Q9BSW7 474 aa18.3■□□□□ 0.52
SNED1-212ENST00000493358 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
SNED1-212ENST00000493358 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
SNED1-212ENST00000493358 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
SNED1-212ENST00000493358 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
SNED1-212ENST00000493358 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
SNED1-212ENST00000493358 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
SNED1-212ENST00000493358 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
SNED1-212ENST00000493358 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
SNED1-212ENST00000493358 AK7Q96M32 723 aa18.26■□□□□ 0.51
SNED1-212ENST00000493358 PHKG2P15735 406 aa18.25■□□□□ 0.51
SNED1-212ENST00000493358 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
SNED1-212ENST00000493358 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
SNED1-212ENST00000493358 PIGBQ92521 554 aa18.24■□□□□ 0.51
SNED1-212ENST00000493358 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
SNED1-212ENST00000493358 SCN11AQ9UI33 1791 aa18.23■□□□□ 0.51
SNED1-212ENST00000493358 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
SNED1-212ENST00000493358 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
SNED1-212ENST00000493358 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
SNED1-212ENST00000493358 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SNED1-212ENST00000493358 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
SNED1-212ENST00000493358 SIK1P57059 783 aa18.2■□□□□ 0.5
SNED1-212ENST00000493358 GPR162Q16538 588 aa18.2■□□□□ 0.5
SNED1-212ENST00000493358 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
SNED1-212ENST00000493358 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
SNED1-212ENST00000493358 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
SNED1-212ENST00000493358 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
SNED1-212ENST00000493358 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
SNED1-212ENST00000493358 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
SNED1-212ENST00000493358 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
SNED1-212ENST00000493358 PHF14O94880 888 aa18.17■□□□□ 0.5
SNED1-212ENST00000493358 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms