RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 FLT4P35916 1363 aa30.77■■■□□ 2.52
LYSMD4-208ENST00000493256 ZBTB7AO95365 584 aa30.76■■■□□ 2.51
LYSMD4-208ENST00000493256 KIF24Q5T7B8 1368 aa30.76■■■□□ 2.51
LYSMD4-208ENST00000493256 DOT1LQ8TEK3 1739 aa30.76■■■□□ 2.51
LYSMD4-208ENST00000493256 LRRC4BQ9NT99 713 aa30.73■■■□□ 2.51
LYSMD4-208ENST00000493256 PRIM1P49642 420 aaKnown RBP30.72■■■□□ 2.51
LYSMD4-208ENST00000493256 EMILIN1Q9Y6C2 1016 aa30.72■■■□□ 2.51
LYSMD4-208ENST00000493256 CGNL1Q0VF96 1302 aa30.72■■■□□ 2.51
LYSMD4-208ENST00000493256 CCER1Q8TC90 406 aaPredicted RBP30.71■■■□□ 2.51
LYSMD4-208ENST00000493256 RAPGEF4Q8WZA2 1011 aa30.71■■■□□ 2.51
LYSMD4-208ENST00000493256 SYTL4Q96C24 671 aaPredicted RBP30.71■■■□□ 2.51
LYSMD4-208ENST00000493256 NSD2O96028 1365 aa30.7■■■□□ 2.51
LYSMD4-208ENST00000493256 POLR3GLQ9BT43 218 aa30.7■■■□□ 2.51
LYSMD4-208ENST00000493256 PTGER2P43116 358 aa30.69■■■□□ 2.5
LYSMD4-208ENST00000493256 ATF5Q9Y2D1 282 aaPredicted RBP30.69■■■□□ 2.5
LYSMD4-208ENST00000493256 TATP17735 454 aaPredicted RBP30.68■■■□□ 2.5
LYSMD4-208ENST00000493256 EIF4G2P78344 907 aaKnown RBP eCLIP30.68■■■□□ 2.5
LYSMD4-208ENST00000493256 ZNF827Q17R98 1081 aa30.68■■■□□ 2.5
LYSMD4-208ENST00000493256 ANKRD26Q9UPS8 1709 aa30.67■■■□□ 2.5
LYSMD4-208ENST00000493256 HSPA5P11021 654 aaKnown RBP30.67■■■□□ 2.5
LYSMD4-208ENST00000493256 SLC27A3Q5K4L6 730 aa30.66■■■□□ 2.5
LYSMD4-208ENST00000493256 PPM1GO15355 546 aaPredicted RBP30.64■■■□□ 2.5
LYSMD4-208ENST00000493256 MTFR1LQ9H019 292 aa30.64■■■□□ 2.5
LYSMD4-208ENST00000493256 MAP2P11137 1827 aaKnown RBP30.63■■■□□ 2.49
LYSMD4-208ENST00000493256 LY75O60449 1722 aa30.62■■■□□ 2.49
LYSMD4-208ENST00000493256 AKT1S1Q96B36 256 aa30.62■■■□□ 2.49
LYSMD4-208ENST00000493256 KCNQ4P56696 695 aa30.61■■■□□ 2.49
LYSMD4-208ENST00000493256 PCDH11XQ9BZA7 1347 aa30.61■■■□□ 2.49
LYSMD4-208ENST00000493256 PCDH11YQ9BZA8 1340 aa30.61■■■□□ 2.49
LYSMD4-208ENST00000493256 NCAPD2Q15021 1401 aa30.61■■■□□ 2.49
LYSMD4-208ENST00000493256 WASHC2AQ641Q2 1341 aa30.6■■■□□ 2.49
LYSMD4-208ENST00000493256 SGIP1Q9BQI5 828 aa30.6■■■□□ 2.49
LYSMD4-208ENST00000493256 POLKQ9UBT6 870 aa30.58■■■□□ 2.49
LYSMD4-208ENST00000493256 QSER1Q2KHR3 1735 aa30.57■■■□□ 2.48
LYSMD4-208ENST00000493256 PKD1L3Q7Z443 1732 aa30.57■■■□□ 2.48
LYSMD4-208ENST00000493256 CYP27B1O15528 508 aa30.56■■■□□ 2.48
LYSMD4-208ENST00000493256 TUBGCP6Q96RT7 1819 aa30.55■■■□□ 2.48
LYSMD4-208ENST00000493256 TNNT2P45379 298 aaPredicted RBP30.54■■■□□ 2.48
LYSMD4-208ENST00000493256 PANK3Q9H999 370 aa30.54■■■□□ 2.48
LYSMD4-208ENST00000493256 CCNL1Q9UK58 526 aaPredicted RBP30.54■■■□□ 2.48
LYSMD4-208ENST00000493256 PNPLA7Q6ZV29 1317 aa30.53■■■□□ 2.48
LYSMD4-208ENST00000493256 EYA1Q99502 592 aa30.53■■■□□ 2.48
LYSMD4-208ENST00000493256 FHDC1Q9C0D6 1143 aaPredicted RBP30.52■■■□□ 2.48
LYSMD4-208ENST00000493256 TOGARAM1Q9Y4F4 1720 aa30.52■■■□□ 2.48
LYSMD4-208ENST00000493256 TFCP2L1Q9NZI6 479 aa30.51■■■□□ 2.47
LYSMD4-208ENST00000493256 DCAF8L1A6NGE4 600 aa30.5■■■□□ 2.47
LYSMD4-208ENST00000493256 ARXQ96QS3 562 aa30.49■■■□□ 2.47
LYSMD4-208ENST00000493256 ITGB4P16144 1822 aa30.48■■■□□ 2.47
LYSMD4-208ENST00000493256 SLC16A10Q8TF71 515 aa30.48■■■□□ 2.47
LYSMD4-208ENST00000493256 SYT17Q9BSW7 474 aa30.48■■■□□ 2.47
LYSMD4-208ENST00000493256 EIF4A2Q14240 407 aaKnown RBP30.47■■■□□ 2.47
LYSMD4-208ENST00000493256 MPRIPQ6WCQ1 1025 aa30.47■■■□□ 2.47
LYSMD4-208ENST00000493256 SPG7Q9UQ90 795 aa30.47■■■□□ 2.47
LYSMD4-208ENST00000493256 PALLDQ8WX93 1383 aa30.45■■■□□ 2.47
LYSMD4-208ENST00000493256 YY1P25490 414 aa30.45■■■□□ 2.47
LYSMD4-208ENST00000493256 COL24A1Q17RW2 1714 aa30.44■■■□□ 2.46
LYSMD4-208ENST00000493256 NKX1-1Q15270 411 aaPredicted RBP30.44■■■□□ 2.46
LYSMD4-208ENST00000493256 C5P01031 1676 aa30.43■■■□□ 2.46
LYSMD4-208ENST00000493256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.43■■■□□ 2.46
LYSMD4-208ENST00000493256 MAP3K5Q99683 1374 aa30.41■■■□□ 2.46
LYSMD4-208ENST00000493256 PIGBQ92521 554 aa30.4■■■□□ 2.46
LYSMD4-208ENST00000493256 TAF1LQ8IZX4 1826 aa30.4■■■□□ 2.46
LYSMD4-208ENST00000493256 POLD1P28340 1107 aa30.38■■■□□ 2.45
LYSMD4-208ENST00000493256 MORC1Q86VD1 984 aa30.38■■■□□ 2.45
LYSMD4-208ENST00000493256 SMARCC1Q92922 1105 aaPredicted RBP30.38■■■□□ 2.45
LYSMD4-208ENST00000493256 IGSF1Q8N6C5 1336 aa30.38■■■□□ 2.45
LYSMD4-208ENST00000493256 PHKG2P15735 406 aa30.37■■■□□ 2.45
LYSMD4-208ENST00000493256 COL23A1Q86Y22 540 aaPredicted RBP30.37■■■□□ 2.45
LYSMD4-208ENST00000493256 MSH5O43196 834 aa30.35■■■□□ 2.45
LYSMD4-208ENST00000493256 IFNL2Q8IZJ0 200 aa30.35■■■□□ 2.45
LYSMD4-208ENST00000493256 KNSTRNQ9Y448 316 aa30.35■■■□□ 2.45
LYSMD4-208ENST00000493256 PLEKHG2Q9H7P9 1386 aa30.35■■■□□ 2.45
LYSMD4-208ENST00000493256 KIF7Q2M1P5 1343 aa30.33■■■□□ 2.45
LYSMD4-208ENST00000493256 C4BP0C0L5 1744 aa30.33■■■□□ 2.45
LYSMD4-208ENST00000493256 TMOD3Q9NYL9 352 aa30.32■■■□□ 2.44
LYSMD4-208ENST00000493256 UTRNP46939 3433 aa30.31■■■□□ 2.44
LYSMD4-208ENST00000493256 HMGB2P26583 209 aaKnown RBP30.31■■■□□ 2.44
LYSMD4-208ENST00000493256 KLHL34Q8N239 644 aa30.31■■■□□ 2.44
LYSMD4-208ENST00000493256 AMER1Q5JTC6 1135 aaPredicted RBP30.29■■■□□ 2.44
LYSMD4-208ENST00000493256 LOC102724428A0A0B4J2F2 783 aa30.28■■■□□ 2.44
LYSMD4-208ENST00000493256 SIK1P57059 783 aa30.28■■■□□ 2.44
LYSMD4-208ENST00000493256 MSL1Q68DK7 614 aa30.28■■■□□ 2.44
LYSMD4-208ENST00000493256 ASAP1Q9ULH1 1129 aa30.28■■■□□ 2.44
LYSMD4-208ENST00000493256 FLAD1Q8NFF5 587 aa30.27■■■□□ 2.44
LYSMD4-208ENST00000493256 AMIGO3Q86WK7 504 aa30.26■■■□□ 2.43
LYSMD4-208ENST00000493256 AK7Q96M32 723 aa30.26■■■□□ 2.43
LYSMD4-208ENST00000493256 UBR3Q6ZT12 1888 aa30.25■■■□□ 2.43
LYSMD4-208ENST00000493256 AEBP1Q8IUX7 1158 aa30.25■■■□□ 2.43
LYSMD4-208ENST00000493256 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
LYSMD4-208ENST00000493256 LINC00116Q8NCU8 138 aa30.23■■■□□ 2.43
LYSMD4-208ENST00000493256 ATG3Q9NT62 314 aa30.23■■■□□ 2.43
LYSMD4-208ENST00000493256 ZNF530Q6P9A1 599 aaPredicted RBP30.22■■■□□ 2.43
LYSMD4-208ENST00000493256 NLGN2Q8NFZ4 835 aa30.22■■■□□ 2.43
LYSMD4-208ENST00000493256 ITPK1Q13572 414 aa30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 AMOTQ4VCS5 1084 aa30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 SMIM5Q71RC9 77 aa30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 DCAF5Q96JK2 942 aa30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 CHD4Q14839 1912 aa30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 KDM6AO15550 1401 aaPredicted RBP30.21■■■□□ 2.43
LYSMD4-208ENST00000493256 ERVV-2B6SEH9 535 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms