RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 STARD3NLO95772 234 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 RAPGEF3O95398 923 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 NUDT16Q96DE0 195 aaKnown RBP19.25■□□□□ 0.67
BRAT1-206ENST00000493232 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 CFAP45Q9UL16 551 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.67
BRAT1-206ENST00000493232 BMP2KQ9NSY1 1161 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-206ENST00000493232 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-206ENST00000493232 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 ERLIN2O94905 339 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 PDCL3Q9H2J4 239 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
BRAT1-206ENST00000493232 RAI14Q9P0K7 980 aa19.24■□□□□ 0.67
BRAT1-206ENST00000493232 CCDC141Q6ZP82 1450 aa19.24■□□□□ 0.67
BRAT1-206ENST00000493232 RBM5P52756 815 aaKnown RBP eCLIP19.24■□□□□ 0.67
BRAT1-206ENST00000493232 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
BRAT1-206ENST00000493232 CWC15Q9P013 229 aaKnown RBP19.24■□□□□ 0.67
BRAT1-206ENST00000493232 MAP4K4O95819 1239 aaPredicted RBP19.23■□□□□ 0.67
BRAT1-206ENST00000493232 AKNAQ7Z591 1439 aa19.23■□□□□ 0.67
BRAT1-206ENST00000493232 JAKMIP1Q96N16 626 aaKnown RBP19.23■□□□□ 0.67
BRAT1-206ENST00000493232 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
BRAT1-206ENST00000493232 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
BRAT1-206ENST00000493232 DEF6Q9H4E7 631 aa19.22■□□□□ 0.67
BRAT1-206ENST00000493232 PAF1Q8N7H5 531 aa19.22■□□□□ 0.67
BRAT1-206ENST00000493232 ZHX3Q9H4I2 956 aa19.22■□□□□ 0.67
BRAT1-206ENST00000493232 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
BRAT1-206ENST00000493232 LRP2BPQ9P2M1 347 aa19.22■□□□□ 0.67
BRAT1-206ENST00000493232 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
BRAT1-206ENST00000493232 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 SPATA32Q96LK8 384 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 IMMTQ16891 758 aaKnown RBP19.21■□□□□ 0.67
BRAT1-206ENST00000493232 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 RAB11FIP3O75154 756 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
BRAT1-206ENST00000493232 TANGO6Q9C0B7 1094 aa19.21■□□□□ 0.67
BRAT1-206ENST00000493232 CEP57L1Q8IYX8 460 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 STK11IPQ8N1F8 1099 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 KIF1BPQ96EK5 621 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 ZNF287Q9HBT7 754 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
BRAT1-206ENST00000493232 CCDC191Q8NCU4 936 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
BRAT1-206ENST00000493232 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
BRAT1-206ENST00000493232 LARP1Q6PKG0 1096 aaKnown RBP19.19■□□□□ 0.66
BRAT1-206ENST00000493232 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
BRAT1-206ENST00000493232 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
BRAT1-206ENST00000493232 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
BRAT1-206ENST00000493232 AMOTQ4VCS5 1084 aa19.18■□□□□ 0.66
BRAT1-206ENST00000493232 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
BRAT1-206ENST00000493232 CEP131Q9UPN4 1083 aa19.18■□□□□ 0.66
BRAT1-206ENST00000493232 GLRX3O76003 335 aaKnown RBP19.18■□□□□ 0.66
BRAT1-206ENST00000493232 SPC24Q8NBT2 197 aa19.18■□□□□ 0.66
BRAT1-206ENST00000493232 IDH1O75874 414 aaKnown RBP19.18■□□□□ 0.66
BRAT1-206ENST00000493232 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
BRAT1-206ENST00000493232 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
BRAT1-206ENST00000493232 CCDC181Q5TID7 509 aa19.17■□□□□ 0.66
BRAT1-206ENST00000493232 H0YHG0 523 aa19.17■□□□□ 0.66
BRAT1-206ENST00000493232 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
BRAT1-206ENST00000493232 NUP62CLQ9H1M0 184 aa19.17■□□□□ 0.66
BRAT1-206ENST00000493232 METTL24Q5JXM2 366 aa19.17■□□□□ 0.66
BRAT1-206ENST00000493232 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
BRAT1-206ENST00000493232 U3KPZ7 1027 aaPredicted RBP19.16■□□□□ 0.66
BRAT1-206ENST00000493232 GOLGA6L10A6NI86 522 aa19.16■□□□□ 0.66
BRAT1-206ENST00000493232 SMTNL1A8MU46 457 aa19.15■□□□□ 0.66
BRAT1-206ENST00000493232 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
BRAT1-206ENST00000493232 ZNF76P36508 570 aa19.15■□□□□ 0.66
BRAT1-206ENST00000493232 AXDND1Q5T1B0 1012 aaPredicted RBP19.15■□□□□ 0.66
BRAT1-206ENST00000493232 IFIT1P09914 478 aaKnown RBP19.15■□□□□ 0.66
BRAT1-206ENST00000493232 ZRSR2Q15696 482 aaKnown RBP19.15■□□□□ 0.66
BRAT1-206ENST00000493232 SSBP05455 408 aaKnown RBP eCLIP19.15■□□□□ 0.66
BRAT1-206ENST00000493232 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
BRAT1-206ENST00000493232 MPHOSPH10O00566 681 aaKnown RBP19.14■□□□□ 0.65
BRAT1-206ENST00000493232 MX1P20591 662 aa19.14■□□□□ 0.65
BRAT1-206ENST00000493232 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
BRAT1-206ENST00000493232 BCL11BQ9C0K0 894 aaPredicted RBP19.14■□□□□ 0.65
BRAT1-206ENST00000493232 ERLIN1O75477 346 aa19.14■□□□□ 0.65
BRAT1-206ENST00000493232 TAF7Q15545 349 aaPredicted RBP19.14■□□□□ 0.65
BRAT1-206ENST00000493232 IQCEQ6IPM2 695 aa19.14■□□□□ 0.65
BRAT1-206ENST00000493232 CAVIN4Q5BKX8 364 aa19.13■□□□□ 0.65
BRAT1-206ENST00000493232 BICDL1Q6ZP65 573 aa19.13■□□□□ 0.65
BRAT1-206ENST00000493232 UPF3BQ9BZI7 483 aaKnown RBP19.13■□□□□ 0.65
BRAT1-206ENST00000493232 DESP17661 470 aa19.13■□□□□ 0.65
BRAT1-206ENST00000493232 HSP90AB3PQ58FF7 597 aa19.13■□□□□ 0.65
BRAT1-206ENST00000493232 CCDC112Q8NEF3 446 aa19.13■□□□□ 0.65
BRAT1-206ENST00000493232 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
BRAT1-206ENST00000493232 NEFHP12036 1026 aa19.12■□□□□ 0.65
BRAT1-206ENST00000493232 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
BRAT1-206ENST00000493232 CCDC66A2RUB6 948 aa19.12■□□□□ 0.65
BRAT1-206ENST00000493232 ABCF2Q9UG63 623 aa19.12■□□□□ 0.65
BRAT1-206ENST00000493232 EXOC6BQ9Y2D4 811 aa19.12■□□□□ 0.65
BRAT1-206ENST00000493232 LEKR1Q6ZMV7 388 aa19.11■□□□□ 0.65
BRAT1-206ENST00000493232 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
BRAT1-206ENST00000493232 CCDC196A0A1B0GTZ2 297 aa19.11■□□□□ 0.65
BRAT1-206ENST00000493232 GRPEL1Q9HAV7 217 aa19.11■□□□□ 0.65
BRAT1-206ENST00000493232 NAIPQ13075 1403 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms