RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 U2SURPO15042 1029 aaKnown RBP22.62■■□□□ 1.21
RER1-208ENST00000493207 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
RER1-208ENST00000493207 HMOX1P09601 288 aa22.61■■□□□ 1.21
RER1-208ENST00000493207 ZCRB1Q8TBF4 217 aaKnown RBP22.61■■□□□ 1.21
RER1-208ENST00000493207 ANP32CO43423 234 aa22.6■■□□□ 1.21
RER1-208ENST00000493207 KDRP35968 1356 aa22.6■■□□□ 1.21
RER1-208ENST00000493207 DDX54Q8TDD1 881 aaKnown RBP22.59■■□□□ 1.21
RER1-208ENST00000493207 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
RER1-208ENST00000493207 SOCS7O14512 581 aa22.58■■□□□ 1.21
RER1-208ENST00000493207 FAM196AQ6ZSG2 479 aa22.58■■□□□ 1.21
RER1-208ENST00000493207 SBF2Q86WG5 1849 aa22.57■■□□□ 1.2
RER1-208ENST00000493207 SPG7Q9UQ90 795 aa22.56■■□□□ 1.2
RER1-208ENST00000493207 PCDH11XQ9BZA7 1347 aa22.56■■□□□ 1.2
RER1-208ENST00000493207 PCDH11YQ9BZA8 1340 aa22.56■■□□□ 1.2
RER1-208ENST00000493207 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
RER1-208ENST00000493207 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
RER1-208ENST00000493207 UPF1Q92900 1129 aaKnown RBP eCLIP22.55■■□□□ 1.2
RER1-208ENST00000493207 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
RER1-208ENST00000493207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.53■■□□□ 1.2
RER1-208ENST00000493207 DOT1LQ8TEK3 1739 aa22.52■■□□□ 1.2
RER1-208ENST00000493207 TNS1Q9HBL0 1735 aaKnown RBP22.52■■□□□ 1.2
RER1-208ENST00000493207 BCL9O00512 1426 aa22.52■■□□□ 1.2
RER1-208ENST00000493207 PLEKHO1Q53GL0 409 aaPredicted RBP22.52■■□□□ 1.2
RER1-208ENST00000493207 CYP27B1O15528 508 aa22.51■■□□□ 1.19
RER1-208ENST00000493207 TRIM37O94972 964 aa22.51■■□□□ 1.19
RER1-208ENST00000493207 NHSQ6T4R5 1651 aa22.5■■□□□ 1.19
RER1-208ENST00000493207 AMOTQ4VCS5 1084 aa22.5■■□□□ 1.19
RER1-208ENST00000493207 RSPH6AQ9H0K4 717 aa22.5■■□□□ 1.19
RER1-208ENST00000493207 ACSBG1Q96GR2 724 aa22.49■■□□□ 1.19
RER1-208ENST00000493207 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
RER1-208ENST00000493207 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
RER1-208ENST00000493207 ZNF530Q6P9A1 599 aaPredicted RBP22.48■■□□□ 1.19
RER1-208ENST00000493207 FCHSD2O94868 740 aa22.47■■□□□ 1.19
RER1-208ENST00000493207 PHKG2P15735 406 aa22.47■■□□□ 1.19
RER1-208ENST00000493207 SF3B2Q13435 895 aaKnown RBP22.47■■□□□ 1.19
RER1-208ENST00000493207 CCDC125Q86Z20 511 aa22.47■■□□□ 1.19
RER1-208ENST00000493207 IFNL2Q8IZJ0 200 aa22.47■■□□□ 1.19
RER1-208ENST00000493207 TOGARAM1Q9Y4F4 1720 aa22.47■■□□□ 1.19
RER1-208ENST00000493207 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
RER1-208ENST00000493207 KCNQ2O43526 872 aa22.44■■□□□ 1.18
RER1-208ENST00000493207 WDR43Q15061 677 aaKnown RBP eCLIP22.44■■□□□ 1.18
RER1-208ENST00000493207 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
RER1-208ENST00000493207 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
RER1-208ENST00000493207 VIRMAQ69YN4 1812 aaKnown RBP22.44■■□□□ 1.18
RER1-208ENST00000493207 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
RER1-208ENST00000493207 BTAF1O14981 1849 aa22.43■■□□□ 1.18
RER1-208ENST00000493207 ITGB4P16144 1822 aa22.43■■□□□ 1.18
RER1-208ENST00000493207 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
RER1-208ENST00000493207 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
RER1-208ENST00000493207 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
RER1-208ENST00000493207 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
RER1-208ENST00000493207 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
RER1-208ENST00000493207 APBA3O96018 575 aa22.41■■□□□ 1.18
RER1-208ENST00000493207 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
RER1-208ENST00000493207 MRS2Q9HD23 443 aa22.41■■□□□ 1.18
RER1-208ENST00000493207 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
RER1-208ENST00000493207 AKAP4Q5JQC9 854 aa22.4■■□□□ 1.18
RER1-208ENST00000493207 SCN11AQ9UI33 1791 aa22.4■■□□□ 1.18
RER1-208ENST00000493207 DEFB132Q7Z7B7 95 aa22.39■■□□□ 1.17
RER1-208ENST00000493207 GAS2L2Q8NHY3 880 aa22.39■■□□□ 1.17
RER1-208ENST00000493207 PLEKHF1Q96S99 279 aa22.39■■□□□ 1.17
RER1-208ENST00000493207 PNNQ9H307 717 aaKnown RBP22.39■■□□□ 1.17
RER1-208ENST00000493207 KDM6AO15550 1401 aaPredicted RBP22.39■■□□□ 1.17
RER1-208ENST00000493207 NEFMP07197 916 aa22.38■■□□□ 1.17
RER1-208ENST00000493207 BAG6P46379 1132 aa22.38■■□□□ 1.17
RER1-208ENST00000493207 MPRIPQ6WCQ1 1025 aa22.38■■□□□ 1.17
RER1-208ENST00000493207 DCAF5Q96JK2 942 aa22.38■■□□□ 1.17
RER1-208ENST00000493207 ADAMTS8Q9UP79 889 aa22.38■■□□□ 1.17
RER1-208ENST00000493207 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
RER1-208ENST00000493207 RGPD3A6NKT7 1758 aaPredicted RBP22.36■■□□□ 1.17
RER1-208ENST00000493207 RGPD4Q7Z3J3 1758 aa22.36■■□□□ 1.17
RER1-208ENST00000493207 DLG5Q8TDM6 1919 aa22.36■■□□□ 1.17
RER1-208ENST00000493207 EN1Q05925 392 aaPredicted RBP22.36■■□□□ 1.17
RER1-208ENST00000493207 CCDC146Q8IYE0 955 aa22.36■■□□□ 1.17
RER1-208ENST00000493207 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
RER1-208ENST00000493207 ADAMTS7Q9UKP4 1686 aa22.35■■□□□ 1.17
RER1-208ENST00000493207 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
RER1-208ENST00000493207 LGR6Q9HBX8 967 aa22.33■■□□□ 1.17
RER1-208ENST00000493207 TMOD3Q9NYL9 352 aa22.33■■□□□ 1.17
RER1-208ENST00000493207 ERVV-2B6SEH9 535 aa22.32■■□□□ 1.16
RER1-208ENST00000493207 RNMTO43148 476 aaKnown RBP22.32■■□□□ 1.16
RER1-208ENST00000493207 EZH2Q15910 746 aaKnown RBP22.32■■□□□ 1.16
RER1-208ENST00000493207 PNISRQ8TF01 805 aaKnown RBP22.32■■□□□ 1.16
RER1-208ENST00000493207 RREB1Q92766 1687 aa22.32■■□□□ 1.16
RER1-208ENST00000493207 PLSCR1O15162 318 aa22.31■■□□□ 1.16
RER1-208ENST00000493207 CABP4P57796 275 aa22.31■■□□□ 1.16
RER1-208ENST00000493207 PIGBQ92521 554 aa22.31■■□□□ 1.16
RER1-208ENST00000493207 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
RER1-208ENST00000493207 CAMKK2Q96RR4 588 aa22.31■■□□□ 1.16
RER1-208ENST00000493207 MRC1P22897 1456 aa22.29■■□□□ 1.16
RER1-208ENST00000493207 NFE2L2Q16236 605 aa22.29■■□□□ 1.16
RER1-208ENST00000493207 LY75O60449 1722 aa22.28■■□□□ 1.16
RER1-208ENST00000493207 NUP188Q5SRE5 1749 aa22.28■■□□□ 1.16
RER1-208ENST00000493207 NFATC2IPQ8NCF5 419 aa22.27■■□□□ 1.16
RER1-208ENST00000493207 IL17REQ8NFR9 667 aa22.27■■□□□ 1.16
RER1-208ENST00000493207 RTF1Q92541 710 aaKnown RBP22.27■■□□□ 1.16
RER1-208ENST00000493207 SLC52A2Q9HAB3 445 aa22.27■■□□□ 1.16
RER1-208ENST00000493207 SIPA1L3O60292 1781 aaPredicted RBP22.27■■□□□ 1.16
RER1-208ENST00000493207 MCM10Q7L590 875 aa22.26■■□□□ 1.15
RER1-208ENST00000493207 MIER1Q8N108 512 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms