RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 MEGF6O75095 1541 aa31.55■■■□□ 2.64
HMG20B-214ENST00000493191 NBPF6Q5VWK0 638 aa31.55■■■□□ 2.64
HMG20B-214ENST00000493191 NBPF4Q96M43 638 aa31.55■■■□□ 2.64
HMG20B-214ENST00000493191 DOT1LQ8TEK3 1739 aa31.54■■■□□ 2.64
HMG20B-214ENST00000493191 USP47Q96K76 1375 aa31.54■■■□□ 2.64
HMG20B-214ENST00000493191 SHANK3Q9BYB0 1731 aa31.53■■■□□ 2.64
HMG20B-214ENST00000493191 USHBP1Q8N6Y0 703 aa31.53■■■□□ 2.64
HMG20B-214ENST00000493191 RTL1A6NKG5 1358 aa31.53■■■□□ 2.64
HMG20B-214ENST00000493191 TFCP2L1Q9NZI6 479 aa31.51■■■□□ 2.63
HMG20B-214ENST00000493191 NSD2O96028 1365 aa31.51■■■□□ 2.63
HMG20B-214ENST00000493191 PNPLA7Q6ZV29 1317 aa31.5■■■□□ 2.63
HMG20B-214ENST00000493191 SLC16A10Q8TF71 515 aa31.49■■■□□ 2.63
HMG20B-214ENST00000493191 QSER1Q2KHR3 1735 aa31.47■■■□□ 2.63
HMG20B-214ENST00000493191 RAPGEF4Q8WZA2 1011 aa31.47■■■□□ 2.63
HMG20B-214ENST00000493191 MAP3K5Q99683 1374 aa31.46■■■□□ 2.63
HMG20B-214ENST00000493191 HSP90AB2PQ58FF8 381 aa31.46■■■□□ 2.63
HMG20B-214ENST00000493191 SMG6Q86US8 1419 aaKnown RBP31.46■■■□□ 2.63
HMG20B-214ENST00000493191 LY75O60449 1722 aa31.46■■■□□ 2.63
HMG20B-214ENST00000493191 TUBGCP6Q96RT7 1819 aa31.45■■■□□ 2.63
HMG20B-214ENST00000493191 KLHL34Q8N239 644 aa31.45■■■□□ 2.63
HMG20B-214ENST00000493191 ZNF784Q8NCA9 323 aaPredicted RBP31.45■■■□□ 2.63
HMG20B-214ENST00000493191 CCNL1Q9UK58 526 aaPredicted RBP31.45■■■□□ 2.63
HMG20B-214ENST00000493191 CGNL1Q0VF96 1302 aa31.45■■■□□ 2.62
HMG20B-214ENST00000493191 POLD1P28340 1107 aa31.44■■■□□ 2.62
HMG20B-214ENST00000493191 CHD4Q14839 1912 aa31.43■■■□□ 2.62
HMG20B-214ENST00000493191 TRIM26Q12899 539 aaPredicted RBP31.43■■■□□ 2.62
HMG20B-214ENST00000493191 CDCA8Q53HL2 280 aa31.43■■■□□ 2.62
HMG20B-214ENST00000493191 KIF20BQ96Q89 1820 aa31.42■■■□□ 2.62
HMG20B-214ENST00000493191 TATP17735 454 aaPredicted RBP31.42■■■□□ 2.62
HMG20B-214ENST00000493191 INSRP06213 1382 aa31.41■■■□□ 2.62
HMG20B-214ENST00000493191 GPR162Q16538 588 aa31.4■■■□□ 2.62
HMG20B-214ENST00000493191 CARD14Q9BXL6 1004 aa31.39■■■□□ 2.62
HMG20B-214ENST00000493191 FLT4P35916 1363 aa31.39■■■□□ 2.62
HMG20B-214ENST00000493191 COL24A1Q17RW2 1714 aa31.38■■■□□ 2.61
HMG20B-214ENST00000493191 MSH5O43196 834 aa31.37■■■□□ 2.61
HMG20B-214ENST00000493191 PCDH11XQ9BZA7 1347 aa31.36■■■□□ 2.61
HMG20B-214ENST00000493191 PCDH11YQ9BZA8 1340 aa31.36■■■□□ 2.61
HMG20B-214ENST00000493191 EMILIN1Q9Y6C2 1016 aa31.35■■■□□ 2.61
HMG20B-214ENST00000493191 GOLGB1Q14789 3259 aaKnown RBP31.34■■■□□ 2.61
HMG20B-214ENST00000493191 COL23A1Q86Y22 540 aaPredicted RBP31.34■■■□□ 2.61
HMG20B-214ENST00000493191 KIF24Q5T7B8 1368 aa31.33■■■□□ 2.61
HMG20B-214ENST00000493191 PELP1Q8IZL8 1130 aaKnown RBP31.33■■■□□ 2.61
HMG20B-214ENST00000493191 NSD3Q9BZ95 1437 aa31.32■■■□□ 2.61
HMG20B-214ENST00000493191 MPRIPQ6WCQ1 1025 aa31.32■■■□□ 2.6
HMG20B-214ENST00000493191 NLGN2Q8NFZ4 835 aa31.32■■■□□ 2.6
HMG20B-214ENST00000493191 PPM1GO15355 546 aaPredicted RBP31.31■■■□□ 2.6
HMG20B-214ENST00000493191 CYP27B1O15528 508 aa31.31■■■□□ 2.6
HMG20B-214ENST00000493191 MSL1Q68DK7 614 aa31.28■■■□□ 2.6
HMG20B-214ENST00000493191 PALLDQ8WX93 1383 aa31.27■■■□□ 2.6
HMG20B-214ENST00000493191 C5P01031 1676 aa31.26■■■□□ 2.6
HMG20B-214ENST00000493191 ITGB4P16144 1822 aa31.24■■■□□ 2.59
HMG20B-214ENST00000493191 TAF1LQ8IZX4 1826 aa31.23■■■□□ 2.59
HMG20B-214ENST00000493191 TOGARAM1Q9Y4F4 1720 aa31.23■■■□□ 2.59
HMG20B-214ENST00000493191 MAP2P11137 1827 aaKnown RBP31.21■■■□□ 2.59
HMG20B-214ENST00000493191 PKD1L3Q7Z443 1732 aa31.21■■■□□ 2.59
HMG20B-214ENST00000493191 PIGBQ92521 554 aa31.2■■■□□ 2.59
HMG20B-214ENST00000493191 SMARCC1Q92922 1105 aaPredicted RBP31.2■■■□□ 2.59
HMG20B-214ENST00000493191 POLR3GLQ9BT43 218 aa31.2■■■□□ 2.59
HMG20B-214ENST00000493191 WASHC2AQ641Q2 1341 aa31.2■■■□□ 2.58
HMG20B-214ENST00000493191 HMGB2P26583 209 aaKnown RBP31.19■■■□□ 2.58
HMG20B-214ENST00000493191 EYA1Q99502 592 aa31.19■■■□□ 2.58
HMG20B-214ENST00000493191 TIMELESSQ9UNS1 1208 aa31.19■■■□□ 2.58
HMG20B-214ENST00000493191 SPG7Q9UQ90 795 aa31.19■■■□□ 2.58
HMG20B-214ENST00000493191 NCAPD2Q15021 1401 aa31.18■■■□□ 2.58
HMG20B-214ENST00000493191 YBX3P16989 372 aaKnown RBP eCLIP31.18■■■□□ 2.58
HMG20B-214ENST00000493191 NKX1-1Q15270 411 aaPredicted RBP31.18■■■□□ 2.58
HMG20B-214ENST00000493191 FLAD1Q8NFF5 587 aa31.18■■■□□ 2.58
HMG20B-214ENST00000493191 ANKRD26Q9UPS8 1709 aa31.17■■■□□ 2.58
HMG20B-214ENST00000493191 AK7Q96M32 723 aa31.16■■■□□ 2.58
HMG20B-214ENST00000493191 AMIGO3Q86WK7 504 aa31.15■■■□□ 2.58
HMG20B-214ENST00000493191 POLKQ9UBT6 870 aa31.15■■■□□ 2.58
HMG20B-214ENST00000493191 C4BP0C0L5 1744 aa31.15■■■□□ 2.58
HMG20B-214ENST00000493191 C1QTNF8P60827 252 aa31.14■■■□□ 2.58
HMG20B-214ENST00000493191 SMIM5Q71RC9 77 aa31.14■■■□□ 2.58
HMG20B-214ENST00000493191 TNNT2P45379 298 aaPredicted RBP31.13■■■□□ 2.57
HMG20B-214ENST00000493191 PCGF6Q9BYE7 350 aa31.13■■■□□ 2.57
HMG20B-214ENST00000493191 GRIN3BO60391 1043 aa31.12■■■□□ 2.57
HMG20B-214ENST00000493191 PHF14O94880 888 aa31.12■■■□□ 2.57
HMG20B-214ENST00000493191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.11■■■□□ 2.57
HMG20B-214ENST00000493191 TMOD3Q9NYL9 352 aa31.1■■■□□ 2.57
HMG20B-214ENST00000493191 CD2APQ9Y5K6 639 aa31.1■■■□□ 2.57
HMG20B-214ENST00000493191 LOC102724428A0A0B4J2F2 783 aa31.09■■■□□ 2.57
HMG20B-214ENST00000493191 SIK1P57059 783 aa31.09■■■□□ 2.57
HMG20B-214ENST00000493191 UBR3Q6ZT12 1888 aa31.09■■■□□ 2.57
HMG20B-214ENST00000493191 SENP3-EIF4A1A0A087X0R7 540 aa31.08■■■□□ 2.57
HMG20B-214ENST00000493191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.08■■■□□ 2.57
HMG20B-214ENST00000493191 EIF4A2Q14240 407 aaKnown RBP31.08■■■□□ 2.57
HMG20B-214ENST00000493191 IFNL2Q8IZJ0 200 aa31.08■■■□□ 2.57
HMG20B-214ENST00000493191 LINC00116Q8NCU8 138 aa31.08■■■□□ 2.57
HMG20B-214ENST00000493191 ASAP1Q9ULH1 1129 aa31.08■■■□□ 2.57
HMG20B-214ENST00000493191 PHKG2P15735 406 aa31.07■■■□□ 2.56
HMG20B-214ENST00000493191 CLSPNQ9HAW4 1339 aa31.04■■■□□ 2.56
HMG20B-214ENST00000493191 GIGYF1O75420 1035 aaPredicted RBP31.04■■■□□ 2.56
HMG20B-214ENST00000493191 SSFA2P28290 1259 aa31.03■■■□□ 2.56
HMG20B-214ENST00000493191 ATP6V1AP38606 617 aa31.03■■■□□ 2.56
HMG20B-214ENST00000493191 ITPK1Q13572 414 aa31.03■■■□□ 2.56
HMG20B-214ENST00000493191 ATG3Q9NT62 314 aa31.01■■■□□ 2.55
HMG20B-214ENST00000493191 GNPATO15228 680 aa31■■■□□ 2.55
HMG20B-214ENST00000493191 PANK3Q9H999 370 aa31■■■□□ 2.55
HMG20B-214ENST00000493191 HSPA5P11021 654 aaKnown RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms