RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
LRTM1-202ENST00000493075 USHBP1Q8N6Y0 703 aa15.8■□□□□ 0.12
LRTM1-202ENST00000493075 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
LRTM1-202ENST00000493075 MEGF6O75095 1541 aa15.79■□□□□ 0.12
LRTM1-202ENST00000493075 SLC15A2Q16348 729 aa15.79■□□□□ 0.12
LRTM1-202ENST00000493075 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
LRTM1-202ENST00000493075 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
LRTM1-202ENST00000493075 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
LRTM1-202ENST00000493075 NSD2O96028 1365 aa15.78■□□□□ 0.12
LRTM1-202ENST00000493075 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
LRTM1-202ENST00000493075 SLC27A3Q5K4L6 730 aa15.77■□□□□ 0.12
LRTM1-202ENST00000493075 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.12
LRTM1-202ENST00000493075 NHSQ6T4R5 1651 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 EYA1Q99502 592 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
LRTM1-202ENST00000493075 SYTL4Q96C24 671 aaPredicted RBP15.75■□□□□ 0.11
LRTM1-202ENST00000493075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.11
LRTM1-202ENST00000493075 TNNT2P45379 298 aaPredicted RBP15.74■□□□□ 0.11
LRTM1-202ENST00000493075 LRRC4BQ9NT99 713 aa15.74■□□□□ 0.11
LRTM1-202ENST00000493075 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
LRTM1-202ENST00000493075 EIF4A2Q14240 407 aaKnown RBP15.73■□□□□ 0.11
LRTM1-202ENST00000493075 MORC1Q86VD1 984 aa15.73■□□□□ 0.11
LRTM1-202ENST00000493075 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
LRTM1-202ENST00000493075 CYP27B1O15528 508 aa15.72■□□□□ 0.11
LRTM1-202ENST00000493075 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
LRTM1-202ENST00000493075 HMGB2P26583 209 aaKnown RBP15.71■□□□□ 0.11
LRTM1-202ENST00000493075 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
LRTM1-202ENST00000493075 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
LRTM1-202ENST00000493075 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
LRTM1-202ENST00000493075 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
LRTM1-202ENST00000493075 PPP1R1BQ9UD71 204 aaPredicted RBP15.7■□□□□ 0.1
LRTM1-202ENST00000493075 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
LRTM1-202ENST00000493075 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
LRTM1-202ENST00000493075 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
LRTM1-202ENST00000493075 IGSF1Q8N6C5 1336 aa15.69■□□□□ 0.1
LRTM1-202ENST00000493075 ZBTB7AO95365 584 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 PTGER2P43116 358 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 SLC16A10Q8TF71 515 aa15.68■□□□□ 0.1
LRTM1-202ENST00000493075 BTAF1O14981 1849 aa15.67■□□□□ 0.1
LRTM1-202ENST00000493075 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
LRTM1-202ENST00000493075 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
LRTM1-202ENST00000493075 CCNL1Q9UK58 526 aaPredicted RBP15.67■□□□□ 0.1
LRTM1-202ENST00000493075 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
LRTM1-202ENST00000493075 PHKG2P15735 406 aa15.66■□□□□ 0.1
LRTM1-202ENST00000493075 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
LRTM1-202ENST00000493075 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
LRTM1-202ENST00000493075 KCNQ4P56696 695 aa15.65■□□□□ 0.1
LRTM1-202ENST00000493075 SGIP1Q9BQI5 828 aa15.65■□□□□ 0.1
LRTM1-202ENST00000493075 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
LRTM1-202ENST00000493075 CASZ1Q86V15 1759 aa15.64■□□□□ 0.09
LRTM1-202ENST00000493075 AMOTQ4VCS5 1084 aa15.64■□□□□ 0.09
LRTM1-202ENST00000493075 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
LRTM1-202ENST00000493075 PIGBQ92521 554 aa15.64■□□□□ 0.09
LRTM1-202ENST00000493075 TFCP2L1Q9NZI6 479 aa15.64■□□□□ 0.09
LRTM1-202ENST00000493075 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
LRTM1-202ENST00000493075 IL13P35225 146 aa15.63■□□□□ 0.09
LRTM1-202ENST00000493075 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
LRTM1-202ENST00000493075 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
LRTM1-202ENST00000493075 PNPLA7Q6ZV29 1317 aa15.62■□□□□ 0.09
LRTM1-202ENST00000493075 DOT1LQ8TEK3 1739 aa15.62■□□□□ 0.09
LRTM1-202ENST00000493075 MTHFSP49914 203 aa15.62■□□□□ 0.09
LRTM1-202ENST00000493075 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
LRTM1-202ENST00000493075 TMOD3Q9NYL9 352 aa15.61■□□□□ 0.09
LRTM1-202ENST00000493075 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
LRTM1-202ENST00000493075 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
LRTM1-202ENST00000493075 SULT6B1Q6IMI4 303 aa15.6■□□□□ 0.09
LRTM1-202ENST00000493075 DCAF5Q96JK2 942 aa15.6■□□□□ 0.09
LRTM1-202ENST00000493075 ARXQ96QS3 562 aa15.6■□□□□ 0.09
LRTM1-202ENST00000493075 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
LRTM1-202ENST00000493075 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
LRTM1-202ENST00000493075 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
LRTM1-202ENST00000493075 KDRP35968 1356 aa15.59■□□□□ 0.09
LRTM1-202ENST00000493075 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.08
LRTM1-202ENST00000493075 SYT17Q9BSW7 474 aa15.58■□□□□ 0.08
LRTM1-202ENST00000493075 LY75O60449 1722 aa15.58■□□□□ 0.08
LRTM1-202ENST00000493075 LOC102724428A0A0B4J2F2 783 aa15.57■□□□□ 0.08
LRTM1-202ENST00000493075 POLD1P28340 1107 aa15.57■□□□□ 0.08
LRTM1-202ENST00000493075 SIK1P57059 783 aa15.57■□□□□ 0.08
LRTM1-202ENST00000493075 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
LRTM1-202ENST00000493075 COL23A1Q86Y22 540 aaPredicted RBP15.57■□□□□ 0.08
LRTM1-202ENST00000493075 FHDC1Q9C0D6 1143 aaPredicted RBP15.57■□□□□ 0.08
LRTM1-202ENST00000493075 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
LRTM1-202ENST00000493075 ATG3Q9NT62 314 aa15.56■□□□□ 0.08
LRTM1-202ENST00000493075 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
LRTM1-202ENST00000493075 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
LRTM1-202ENST00000493075 C1orf141Q5JVX7 400 aa15.55■□□□□ 0.08
LRTM1-202ENST00000493075 CABP4P57796 275 aa15.54■□□□□ 0.08
LRTM1-202ENST00000493075 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
LRTM1-202ENST00000493075 AK7Q96M32 723 aa15.53■□□□□ 0.08
LRTM1-202ENST00000493075 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
LRTM1-202ENST00000493075 AKAP4Q5JQC9 854 aa15.52■□□□□ 0.08
LRTM1-202ENST00000493075 QSER1Q2KHR3 1735 aa15.52■□□□□ 0.07
LRTM1-202ENST00000493075 SSFA2P28290 1259 aa15.51■□□□□ 0.07
LRTM1-202ENST00000493075 ITPK1Q13572 414 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms