RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 R3HDM1Q15032 1099 aaKnown RBP25.92■■□□□ 1.74
SSC4D-202ENST00000492979 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
SSC4D-202ENST00000492979 PSDA5PKW4 1024 aaPredicted RBP25.9■■□□□ 1.74
SSC4D-202ENST00000492979 PER1O15534 1290 aaPredicted RBP25.89■■□□□ 1.74
SSC4D-202ENST00000492979 KNSTRNQ9Y448 316 aa25.89■■□□□ 1.74
SSC4D-202ENST00000492979 TATP17735 454 aaPredicted RBP25.88■■□□□ 1.73
SSC4D-202ENST00000492979 TXNRD1Q16881 649 aa25.88■■□□□ 1.73
SSC4D-202ENST00000492979 AMER1Q5JTC6 1135 aaPredicted RBP25.88■■□□□ 1.73
SSC4D-202ENST00000492979 DDX54Q8TDD1 881 aaKnown RBP25.88■■□□□ 1.73
SSC4D-202ENST00000492979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.88■■□□□ 1.73
SSC4D-202ENST00000492979 SHANK3Q9BYB0 1731 aa25.86■■□□□ 1.73
SSC4D-202ENST00000492979 EYA1Q99502 592 aa25.85■■□□□ 1.73
SSC4D-202ENST00000492979 ACSBG1Q96GR2 724 aa25.84■■□□□ 1.73
SSC4D-202ENST00000492979 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.73
SSC4D-202ENST00000492979 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
SSC4D-202ENST00000492979 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
SSC4D-202ENST00000492979 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
SSC4D-202ENST00000492979 PPM1GO15355 546 aaPredicted RBP25.82■■□□□ 1.72
SSC4D-202ENST00000492979 NKX1-1Q15270 411 aaPredicted RBP25.82■■□□□ 1.72
SSC4D-202ENST00000492979 MORC1Q86VD1 984 aa25.82■■□□□ 1.72
SSC4D-202ENST00000492979 EIF4A2Q14240 407 aaKnown RBP25.81■■□□□ 1.72
SSC4D-202ENST00000492979 BTAF1O14981 1849 aa25.81■■□□□ 1.72
SSC4D-202ENST00000492979 SLC27A3Q5K4L6 730 aa25.8■■□□□ 1.72
SSC4D-202ENST00000492979 PRIM1P49642 420 aaKnown RBP25.79■■□□□ 1.72
SSC4D-202ENST00000492979 ANO8Q9HCE9 1232 aaPredicted RBP25.79■■□□□ 1.72
SSC4D-202ENST00000492979 IGSF1Q8N6C5 1336 aa25.79■■□□□ 1.72
SSC4D-202ENST00000492979 PKD1L3Q7Z443 1732 aa25.78■■□□□ 1.72
SSC4D-202ENST00000492979 CYP27B1O15528 508 aa25.78■■□□□ 1.72
SSC4D-202ENST00000492979 KAT6BQ8WYB5 2073 aa25.78■■□□□ 1.72
SSC4D-202ENST00000492979 HMGB2P26583 209 aaKnown RBP25.77■■□□□ 1.72
SSC4D-202ENST00000492979 SLC15A2Q16348 729 aa25.77■■□□□ 1.72
SSC4D-202ENST00000492979 SPG7Q9UQ90 795 aa25.77■■□□□ 1.72
SSC4D-202ENST00000492979 TNNT2P45379 298 aaPredicted RBP25.76■■□□□ 1.71
SSC4D-202ENST00000492979 STK32BQ9NY57 414 aa25.74■■□□□ 1.71
SSC4D-202ENST00000492979 PAPPAQ13219 1627 aa25.74■■□□□ 1.71
SSC4D-202ENST00000492979 LRRC4BQ9NT99 713 aa25.73■■□□□ 1.71
SSC4D-202ENST00000492979 SPON1Q9HCB6 807 aa25.72■■□□□ 1.71
SSC4D-202ENST00000492979 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
SSC4D-202ENST00000492979 CASZ1Q86V15 1759 aa25.7■■□□□ 1.7
SSC4D-202ENST00000492979 KDRP35968 1356 aa25.69■■□□□ 1.7
SSC4D-202ENST00000492979 LY75O60449 1722 aa25.69■■□□□ 1.7
SSC4D-202ENST00000492979 IFNL2Q8IZJ0 200 aa25.69■■□□□ 1.7
SSC4D-202ENST00000492979 IL13P35225 146 aa25.68■■□□□ 1.7
SSC4D-202ENST00000492979 AKT1S1Q96B36 256 aa25.68■■□□□ 1.7
SSC4D-202ENST00000492979 SYTL4Q96C24 671 aaPredicted RBP25.68■■□□□ 1.7
SSC4D-202ENST00000492979 AMOTQ4VCS5 1084 aa25.67■■□□□ 1.7
SSC4D-202ENST00000492979 PHKG2P15735 406 aa25.66■■□□□ 1.7
SSC4D-202ENST00000492979 MTHFSP49914 203 aa25.64■■□□□ 1.7
SSC4D-202ENST00000492979 SMARCC1Q92922 1105 aaPredicted RBP25.64■■□□□ 1.7
SSC4D-202ENST00000492979 PLEKHO1Q53GL0 409 aaPredicted RBP25.63■■□□□ 1.69
SSC4D-202ENST00000492979 SLC16A10Q8TF71 515 aa25.63■■□□□ 1.69
SSC4D-202ENST00000492979 HSP90AB1P08238 724 aaKnown RBP25.62■■□□□ 1.69
SSC4D-202ENST00000492979 QSER1Q2KHR3 1735 aa25.62■■□□□ 1.69
SSC4D-202ENST00000492979 ZNF827Q17R98 1081 aa25.61■■□□□ 1.69
SSC4D-202ENST00000492979 PDGFDQ9GZP0 370 aaPredicted RBP25.61■■□□□ 1.69
SSC4D-202ENST00000492979 MTFR1LQ9H019 292 aa25.61■■□□□ 1.69
SSC4D-202ENST00000492979 ERVV-2B6SEH9 535 aa25.6■■□□□ 1.69
SSC4D-202ENST00000492979 PIGBQ92521 554 aa25.6■■□□□ 1.69
SSC4D-202ENST00000492979 TOGARAM1Q9Y4F4 1720 aa25.6■■□□□ 1.69
SSC4D-202ENST00000492979 ITGB4P16144 1822 aa25.59■■□□□ 1.69
SSC4D-202ENST00000492979 MPRIPQ6WCQ1 1025 aa25.59■■□□□ 1.69
SSC4D-202ENST00000492979 DCAF5Q96JK2 942 aa25.59■■□□□ 1.69
SSC4D-202ENST00000492979 SGIP1Q9BQI5 828 aa25.59■■□□□ 1.69
SSC4D-202ENST00000492979 CCNL1Q9UK58 526 aaPredicted RBP25.59■■□□□ 1.69
SSC4D-202ENST00000492979 PTGER2P43116 358 aa25.58■■□□□ 1.69
SSC4D-202ENST00000492979 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
SSC4D-202ENST00000492979 PALLDQ8WX93 1383 aa25.57■■□□□ 1.68
SSC4D-202ENST00000492979 SULT6B1Q6IMI4 303 aa25.57■■□□□ 1.68
SSC4D-202ENST00000492979 AEBP1Q8IUX7 1158 aa25.55■■□□□ 1.68
SSC4D-202ENST00000492979 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
SSC4D-202ENST00000492979 TMOD3Q9NYL9 352 aa25.54■■□□□ 1.68
SSC4D-202ENST00000492979 PNPLA7Q6ZV29 1317 aa25.53■■□□□ 1.68
SSC4D-202ENST00000492979 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
SSC4D-202ENST00000492979 COL24A1Q17RW2 1714 aa25.51■■□□□ 1.68
SSC4D-202ENST00000492979 ZNF530Q6P9A1 599 aaPredicted RBP25.51■■□□□ 1.67
SSC4D-202ENST00000492979 FLAD1Q8NFF5 587 aa25.51■■□□□ 1.67
SSC4D-202ENST00000492979 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
SSC4D-202ENST00000492979 COL3A1P02461 1466 aaPredicted RBP25.51■■□□□ 1.67
SSC4D-202ENST00000492979 LOC102724428A0A0B4J2F2 783 aa25.49■■□□□ 1.67
SSC4D-202ENST00000492979 KCNQ4P56696 695 aa25.49■■□□□ 1.67
SSC4D-202ENST00000492979 SIK1P57059 783 aa25.49■■□□□ 1.67
SSC4D-202ENST00000492979 PPP1R1BQ9UD71 204 aaPredicted RBP25.49■■□□□ 1.67
SSC4D-202ENST00000492979 KDM6AO15550 1401 aaPredicted RBP25.48■■□□□ 1.67
SSC4D-202ENST00000492979 AKAP4Q5JQC9 854 aa25.48■■□□□ 1.67
SSC4D-202ENST00000492979 C1orf141Q5JVX7 400 aa25.48■■□□□ 1.67
SSC4D-202ENST00000492979 ATG3Q9NT62 314 aa25.48■■□□□ 1.67
SSC4D-202ENST00000492979 ATF5Q9Y2D1 282 aaPredicted RBP25.48■■□□□ 1.67
SSC4D-202ENST00000492979 TAF1LQ8IZX4 1826 aa25.48■■□□□ 1.67
SSC4D-202ENST00000492979 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
SSC4D-202ENST00000492979 MAP3K5Q99683 1374 aa25.47■■□□□ 1.67
SSC4D-202ENST00000492979 ASAP1Q9ULH1 1129 aa25.47■■□□□ 1.67
SSC4D-202ENST00000492979 C5P01031 1676 aa25.46■■□□□ 1.67
SSC4D-202ENST00000492979 TUBGCP6Q96RT7 1819 aa25.43■■□□□ 1.66
SSC4D-202ENST00000492979 CABP4P57796 275 aa25.42■■□□□ 1.66
SSC4D-202ENST00000492979 COL23A1Q86Y22 540 aaPredicted RBP25.42■■□□□ 1.66
SSC4D-202ENST00000492979 ARXQ96QS3 562 aa25.42■■□□□ 1.66
SSC4D-202ENST00000492979 C4BP0C0L5 1744 aa25.41■■□□□ 1.66
SSC4D-202ENST00000492979 CFAP53Q96M91 514 aa25.41■■□□□ 1.66
SSC4D-202ENST00000492979 HMOX1P09601 288 aa25.4■■□□□ 1.66
SSC4D-202ENST00000492979 SSFA2P28290 1259 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms