RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
SPTA1-208ENST00000492934 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
SPTA1-208ENST00000492934 ATP7BP35670 1465 aa10.57□□□□□ -0.72
SPTA1-208ENST00000492934 SEPT12Q8IYM1 358 aa10.57□□□□□ -0.72
SPTA1-208ENST00000492934 CRYBG1Q9Y4K1 1723 aa10.57□□□□□ -0.72
SPTA1-208ENST00000492934 PRR36Q9H6K5 1346 aa10.57□□□□□ -0.72
SPTA1-208ENST00000492934 SF3B2Q13435 895 aaKnown RBP10.56□□□□□ -0.72
SPTA1-208ENST00000492934 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
SPTA1-208ENST00000492934 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
SPTA1-208ENST00000492934 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
SPTA1-208ENST00000492934 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
SPTA1-208ENST00000492934 TOPAZ1Q8N9V7 1692 aa10.54□□□□□ -0.72
SPTA1-208ENST00000492934 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
SPTA1-208ENST00000492934 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
SPTA1-208ENST00000492934 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
SPTA1-208ENST00000492934 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
SPTA1-208ENST00000492934 BTG4Q9NY30 223 aa10.54□□□□□ -0.72
SPTA1-208ENST00000492934 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
SPTA1-208ENST00000492934 FAM83GA6ND36 823 aa10.53□□□□□ -0.72
SPTA1-208ENST00000492934 PSEN2P49810 448 aa10.53□□□□□ -0.72
SPTA1-208ENST00000492934 FAM98CQ17RN3 349 aaKnown RBP10.53□□□□□ -0.72
SPTA1-208ENST00000492934 NGDNQ8NEJ9 315 aaKnown RBP10.53□□□□□ -0.72
SPTA1-208ENST00000492934 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
SPTA1-208ENST00000492934 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
SPTA1-208ENST00000492934 RGPD1P0DJD0 1748 aa10.52□□□□□ -0.73
SPTA1-208ENST00000492934 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.73
SPTA1-208ENST00000492934 LRP5O75197 1615 aa10.51□□□□□ -0.73
SPTA1-208ENST00000492934 PTCD2Q8WV60 388 aaKnown RBP10.51□□□□□ -0.73
SPTA1-208ENST00000492934 PRDM11Q9NQV5 511 aa10.51□□□□□ -0.73
SPTA1-208ENST00000492934 KIAA0232Q92628 1395 aa10.51□□□□□ -0.73
SPTA1-208ENST00000492934 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
SPTA1-208ENST00000492934 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
SPTA1-208ENST00000492934 RGS20O76081 388 aa10.5□□□□□ -0.73
SPTA1-208ENST00000492934 BAG6P46379 1132 aa10.5□□□□□ -0.73
SPTA1-208ENST00000492934 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
SPTA1-208ENST00000492934 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
SPTA1-208ENST00000492934 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
SPTA1-208ENST00000492934 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
SPTA1-208ENST00000492934 SPATA31A5Q5VU36 1347 aa10.49□□□□□ -0.73
SPTA1-208ENST00000492934 SPATA31A7Q8IWB4 1347 aa10.49□□□□□ -0.73
SPTA1-208ENST00000492934 PPP1R37O75864 691 aa10.48□□□□□ -0.73
SPTA1-208ENST00000492934 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
SPTA1-208ENST00000492934 CHRNA2Q15822 529 aa10.47□□□□□ -0.73
SPTA1-208ENST00000492934 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
SPTA1-208ENST00000492934 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
SPTA1-208ENST00000492934 NUTM2GQ5VZR2 741 aa10.46□□□□□ -0.73
SPTA1-208ENST00000492934 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
SPTA1-208ENST00000492934 STRN4Q9NRL3 753 aa10.46□□□□□ -0.73
SPTA1-208ENST00000492934 DISP2A7MBM2 1401 aa10.46□□□□□ -0.74
SPTA1-208ENST00000492934 SSH2Q76I76 1423 aa10.46□□□□□ -0.74
SPTA1-208ENST00000492934 QRICH2Q9H0J4 1663 aa10.46□□□□□ -0.74
SPTA1-208ENST00000492934 LMO7Q8WWI1 1683 aa10.45□□□□□ -0.74
SPTA1-208ENST00000492934 PPIP5K1Q6PFW1 1433 aa10.45□□□□□ -0.74
SPTA1-208ENST00000492934 ACEP12821 1306 aa10.45□□□□□ -0.74
SPTA1-208ENST00000492934 SPATA31A1Q5TZJ5 1347 aa10.45□□□□□ -0.74
SPTA1-208ENST00000492934 HRCP23327 699 aa10.45□□□□□ -0.74
SPTA1-208ENST00000492934 ZC3H6P61129 1189 aaKnown RBP10.45□□□□□ -0.74
SPTA1-208ENST00000492934 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
SPTA1-208ENST00000492934 USP19O94966 1318 aa10.43□□□□□ -0.74
SPTA1-208ENST00000492934 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
SPTA1-208ENST00000492934 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
SPTA1-208ENST00000492934 IRX2Q9BZI1 471 aaPredicted RBP10.43□□□□□ -0.74
SPTA1-208ENST00000492934 USP35Q9P2H5 1018 aa10.43□□□□□ -0.74
SPTA1-208ENST00000492934 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
SPTA1-208ENST00000492934 CPDO75976 1380 aa10.42□□□□□ -0.74
SPTA1-208ENST00000492934 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-208ENST00000492934 PTPN5P54829 565 aa10.42□□□□□ -0.74
SPTA1-208ENST00000492934 FOXK1P85037 733 aa10.42□□□□□ -0.74
SPTA1-208ENST00000492934 NBPF8Q3BBV2 869 aa10.42□□□□□ -0.74
SPTA1-208ENST00000492934 ABTB2Q8N961 1025 aa10.42□□□□□ -0.74
SPTA1-208ENST00000492934 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-208ENST00000492934 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-208ENST00000492934 RREB1Q92766 1687 aa10.41□□□□□ -0.74
SPTA1-208ENST00000492934 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
SPTA1-208ENST00000492934 TBC1D12O60347 775 aa10.41□□□□□ -0.74
SPTA1-208ENST00000492934 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
SPTA1-208ENST00000492934 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
SPTA1-208ENST00000492934 USP6P35125 1406 aa10.41□□□□□ -0.74
SPTA1-208ENST00000492934 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 SLIT3O75094 1523 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 TRIM37O94972 964 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 EVA1CP58658 441 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.74
SPTA1-208ENST00000492934 LARP1Q6PKG0 1096 aaKnown RBP10.4□□□□□ -0.74
SPTA1-208ENST00000492934 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 VPS9D1Q9Y2B5 631 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 NUP188Q5SRE5 1749 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 PARP4Q9UKK3 1724 aaKnown RBP10.4□□□□□ -0.74
SPTA1-208ENST00000492934 PIK3C2AO00443 1686 aa10.4□□□□□ -0.74
SPTA1-208ENST00000492934 LRRC37A3O60309 1634 aa10.4□□□□□ -0.75
SPTA1-208ENST00000492934 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.75
SPTA1-208ENST00000492934 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
SPTA1-208ENST00000492934 PDE3BQ13370 1112 aa10.39□□□□□ -0.75
SPTA1-208ENST00000492934 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
SPTA1-208ENST00000492934 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
SPTA1-208ENST00000492934 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
SPTA1-208ENST00000492934 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
SPTA1-208ENST00000492934 TCP11L2Q8N4U5 519 aa10.38□□□□□ -0.75
SPTA1-208ENST00000492934 CRB1P82279 1406 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms