RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
PDCD4-210ENST00000492932 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
PDCD4-210ENST00000492932 INSRP06213 1382 aa16.07■□□□□ 0.16
PDCD4-210ENST00000492932 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
PDCD4-210ENST00000492932 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
PDCD4-210ENST00000492932 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
PDCD4-210ENST00000492932 MEGF6O75095 1541 aa16.05■□□□□ 0.16
PDCD4-210ENST00000492932 YY1P25490 414 aa16.05■□□□□ 0.16
PDCD4-210ENST00000492932 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
PDCD4-210ENST00000492932 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
PDCD4-210ENST00000492932 KAT6BQ8WYB5 2073 aa16.05■□□□□ 0.16
PDCD4-210ENST00000492932 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
PDCD4-210ENST00000492932 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
PDCD4-210ENST00000492932 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
PDCD4-210ENST00000492932 RGPD2P0DJD1 1756 aa16.04■□□□□ 0.16
PDCD4-210ENST00000492932 DOT1LQ8TEK3 1739 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 MYOM1P52179 1685 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 PTGER2P43116 358 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
PDCD4-210ENST00000492932 CARD14Q9BXL6 1004 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
PDCD4-210ENST00000492932 PAPPAQ13219 1627 aa16.02■□□□□ 0.16
PDCD4-210ENST00000492932 ZNF827Q17R98 1081 aa16.02■□□□□ 0.16
PDCD4-210ENST00000492932 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
PDCD4-210ENST00000492932 POLD1P28340 1107 aa16.01■□□□□ 0.15
PDCD4-210ENST00000492932 ARXQ96QS3 562 aa16.01■□□□□ 0.15
PDCD4-210ENST00000492932 FHDC1Q9C0D6 1143 aaPredicted RBP16.01■□□□□ 0.15
PDCD4-210ENST00000492932 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
PDCD4-210ENST00000492932 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
PDCD4-210ENST00000492932 AKT1S1Q96B36 256 aa16■□□□□ 0.15
PDCD4-210ENST00000492932 SYT17Q9BSW7 474 aa15.99■□□□□ 0.15
PDCD4-210ENST00000492932 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
PDCD4-210ENST00000492932 SHANK3Q9BYB0 1731 aa15.99■□□□□ 0.15
PDCD4-210ENST00000492932 MSH5O43196 834 aa15.98■□□□□ 0.15
PDCD4-210ENST00000492932 WASHC2AQ641Q2 1341 aa15.97■□□□□ 0.15
PDCD4-210ENST00000492932 KCNQ4P56696 695 aa15.97■□□□□ 0.15
PDCD4-210ENST00000492932 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
PDCD4-210ENST00000492932 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
PDCD4-210ENST00000492932 NSD2O96028 1365 aa15.97■□□□□ 0.15
PDCD4-210ENST00000492932 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
PDCD4-210ENST00000492932 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
PDCD4-210ENST00000492932 LY75O60449 1722 aa15.96■□□□□ 0.15
PDCD4-210ENST00000492932 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
PDCD4-210ENST00000492932 QSER1Q2KHR3 1735 aa15.95■□□□□ 0.14
PDCD4-210ENST00000492932 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
PDCD4-210ENST00000492932 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
PDCD4-210ENST00000492932 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
PDCD4-210ENST00000492932 PALLDQ8WX93 1383 aa15.93■□□□□ 0.14
PDCD4-210ENST00000492932 CYP27B1O15528 508 aa15.93■□□□□ 0.14
PDCD4-210ENST00000492932 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
PDCD4-210ENST00000492932 EYA1Q99502 592 aa15.93■□□□□ 0.14
PDCD4-210ENST00000492932 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
PDCD4-210ENST00000492932 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
PDCD4-210ENST00000492932 ANKRD26Q9UPS8 1709 aa15.92■□□□□ 0.14
PDCD4-210ENST00000492932 PANK3Q9H999 370 aa15.92■□□□□ 0.14
PDCD4-210ENST00000492932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.144e-9■■□□□ 11.4
PDCD4-210ENST00000492932 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
PDCD4-210ENST00000492932 GPR162Q16538 588 aa15.91■□□□□ 0.14
PDCD4-210ENST00000492932 IFNL2Q8IZJ0 200 aa15.91■□□□□ 0.14
PDCD4-210ENST00000492932 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
PDCD4-210ENST00000492932 AK7Q96M32 723 aa15.9■□□□□ 0.14
PDCD4-210ENST00000492932 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
PDCD4-210ENST00000492932 NCAPD2Q15021 1401 aa15.9■□□□□ 0.14
PDCD4-210ENST00000492932 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
PDCD4-210ENST00000492932 MORC1Q86VD1 984 aa15.89■□□□□ 0.13
PDCD4-210ENST00000492932 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
PDCD4-210ENST00000492932 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
PDCD4-210ENST00000492932 C5P01031 1676 aa15.89■□□□□ 0.13
PDCD4-210ENST00000492932 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
PDCD4-210ENST00000492932 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
PDCD4-210ENST00000492932 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
PDCD4-210ENST00000492932 PHKG2P15735 406 aa15.87■□□□□ 0.13
PDCD4-210ENST00000492932 PIGBQ92521 554 aa15.87■□□□□ 0.13
PDCD4-210ENST00000492932 HSP90AB1P08238 724 aaKnown RBP15.86■□□□□ 0.13
PDCD4-210ENST00000492932 PLEKHO1Q53GL0 409 aaPredicted RBP15.86■□□□□ 0.13
PDCD4-210ENST00000492932 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
PDCD4-210ENST00000492932 ITGB4P16144 1822 aa15.85■□□□□ 0.13
PDCD4-210ENST00000492932 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
PDCD4-210ENST00000492932 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
PDCD4-210ENST00000492932 PHF14O94880 888 aa15.84■□□□□ 0.13
PDCD4-210ENST00000492932 SIK1P57059 783 aa15.84■□□□□ 0.13
PDCD4-210ENST00000492932 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
PDCD4-210ENST00000492932 IGSF1Q8N6C5 1336 aa15.84■□□□□ 0.13
PDCD4-210ENST00000492932 C4BP0C0L5 1744 aa15.83■□□□□ 0.13
PDCD4-210ENST00000492932 COL24A1Q17RW2 1714 aa15.83■□□□□ 0.13
PDCD4-210ENST00000492932 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
PDCD4-210ENST00000492932 SSFA2P28290 1259 aa15.82■□□□□ 0.12
PDCD4-210ENST00000492932 C1orf141Q5JVX7 400 aa15.82■□□□□ 0.12
PDCD4-210ENST00000492932 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
PDCD4-210ENST00000492932 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
PDCD4-210ENST00000492932 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.81■□□□□ 0.12
PDCD4-210ENST00000492932 ERVV-2B6SEH9 535 aa15.81■□□□□ 0.12
PDCD4-210ENST00000492932 GRIN3BO60391 1043 aa15.81■□□□□ 0.12
PDCD4-210ENST00000492932 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
PDCD4-210ENST00000492932 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
PDCD4-210ENST00000492932 CABP4P57796 275 aa15.8■□□□□ 0.12
PDCD4-210ENST00000492932 ZNF784Q8NCA9 323 aaPredicted RBP15.8■□□□□ 0.12
PDCD4-210ENST00000492932 NLGN2Q8NFZ4 835 aa15.8■□□□□ 0.12
PDCD4-210ENST00000492932 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms