RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CCDC102AQ96A19 550 aa5.31□□□□□ -1.56
BRCA1-220ENST00000492859 NEUROD6Q96NK8 337 aa5.31□□□□□ -1.56
BRCA1-220ENST00000492859 TMEM51Q9NW97 253 aa5.31□□□□□ -1.56
BRCA1-220ENST00000492859 BICDL2A1A5D9 508 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 GIGYF1O75420 1035 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-220ENST00000492859 RASSF7Q02833 373 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 DHX8Q14562 1220 aaKnown RBP5.3□□□□□ -1.56
BRCA1-220ENST00000492859 ZRSR2Q15696 482 aaKnown RBP5.3□□□□□ -1.56
BRCA1-220ENST00000492859 MAP9Q49MG5 647 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 EFCAB2Q5VUJ9 269 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 C9orf131Q5VYM1 1079 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 DMRTA1Q5VZB9 504 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 JAZF1Q86VZ6 243 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 GDPD2Q9HCC8 539 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 DDX56Q9NY93 547 aaKnown RBP5.3□□□□□ -1.56
BRCA1-220ENST00000492859 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
BRCA1-220ENST00000492859 S100BP04271 92 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 TSNAXIP1Q2TAA8 658 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 TTC39BQ5VTQ0 682 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 MYCBPQ99417 103 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 IFT57Q9NWB7 429 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 PRKAG2Q9UGJ0 569 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 DMGDHQ9UI17 866 aaKnown RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 TBC1D2BQ9UPU7 963 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 MINK1Q8N4C8 1332 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 FGAP02671 866 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 MAN1A1P33908 653 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 GTF2F1P35269 517 aaKnown RBP eCLIP5.29□□□□□ -1.564e-8■■■□□ 16.5
BRCA1-220ENST00000492859 PDE6BP35913 854 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 UBE4AQ14139 1066 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 RPAINQ86UA6 219 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 RSPH1Q8WYR4 309 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 SLC39A13Q96H72 371 aa5.29□□□□□ -1.56
BRCA1-220ENST00000492859 CDC5LQ99459 802 aaKnown RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 MKRN1Q9UHC7 482 aaKnown RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 IQSEC3Q9UPP2 1182 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-220ENST00000492859 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 ANKRD33BA6NCL7 494 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 TIMM44O43615 452 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 FAM163BP0C2L3 166 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 SSR1P43307 286 aaKnown RBP5.28□□□□□ -1.56
BRCA1-220ENST00000492859 TERF1P54274 439 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 LSM11P83369 360 aaKnown RBP eCLIP5.28□□□□□ -1.56
BRCA1-220ENST00000492859 RAD51AP2Q09MP3 1159 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 UVSSAQ2YD98 709 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 RNF187Q5TA31 235 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-220ENST00000492859 FILIP1Q7Z7B0 1213 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
BRCA1-220ENST00000492859 ADAMTS19Q8TE59 1207 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 NAP1L4Q99733 375 aaKnown RBP5.28□□□□□ -1.56
BRCA1-220ENST00000492859 LRRC27Q9C0I9 530 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 MUC3BQ9H195 1237 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 ZSWIM4Q9H7M6 989 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 IFT122Q9HBG6 1241 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 ABCF2Q9UG63 623 aa5.28□□□□□ -1.56
BRCA1-220ENST00000492859 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
BRCA1-220ENST00000492859 EVI5O60447 810 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 LDHCP07864 332 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 MAP2K1Q02750 393 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-220ENST00000492859 ZKSCAN8Q15776 578 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-220ENST00000492859 ZNF746Q6NUN9 644 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-220ENST00000492859 CCDC174Q6PII3 467 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 DRC7Q8IY82 874 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 JDP2Q8WYK2 163 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
BRCA1-220ENST00000492859 DPYSL4O14531 572 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 LDHAP00338 332 aaKnown RBP5.26□□□□□ -1.57
BRCA1-220ENST00000492859 IGHDP01880 384 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 VIL1P09327 827 aaKnown RBP5.26□□□□□ -1.57
BRCA1-220ENST00000492859 TGFB3P10600 412 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 POU5F1BQ06416 359 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 NEUROD1Q13562 356 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 KCTD2Q14681 263 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 PHLDB3Q6NSJ2 640 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 FBXO33Q7Z6M2 555 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 ZNF454Q8N9F8 522 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 NGDNQ8NEJ9 315 aaKnown RBP5.26□□□□□ -1.57
BRCA1-220ENST00000492859 PMFBP1Q8TBY8 1022 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 CWC25Q9NXE8 425 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-220ENST00000492859 RAI14Q9P0K7 980 aa5.26□□□□□ -1.57
BRCA1-220ENST00000492859 SMAPO00193 183 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 COL6A1P12109 1028 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 ATP2B1P20020 1258 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 HSD3B2P26439 372 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 MAPRE1Q15691 268 aaKnown RBP5.25□□□□□ -1.57
BRCA1-220ENST00000492859 C1QTNF12Q5T7M4 302 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 CC2D1AQ6P1N0 951 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-220ENST00000492859 GIGYF2Q6Y7W6 1299 aaKnown RBP5.25□□□□□ -1.57
BRCA1-220ENST00000492859 ZSCAN30Q86W11 494 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 KCNK17Q96T54 332 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 CENPJQ9HC77 1338 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-220ENST00000492859 FLT3P36888 993 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 USP5P45974 858 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 MAP3K9P80192 1104 aa5.25□□□□□ -1.57
BRCA1-220ENST00000492859 MAP2K5Q13163 448 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms