RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
SND1-215ENST00000492772 RTL1A6NKG5 1358 aa15.57■□□□□ 0.08
SND1-215ENST00000492772 NSD2O96028 1365 aa15.57■□□□□ 0.08
SND1-215ENST00000492772 COG3Q96JB2 828 aa15.56■□□□□ 0.08
SND1-215ENST00000492772 MEGF6O75095 1541 aa15.56■□□□□ 0.08
SND1-215ENST00000492772 C5P01031 1676 aa15.55■□□□□ 0.08
SND1-215ENST00000492772 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
SND1-215ENST00000492772 MAP3K19Q56UN5 1328 aa15.55■□□□□ 0.08
SND1-215ENST00000492772 HOXC9P31274 260 aa15.55■□□□□ 0.08
SND1-215ENST00000492772 PRIM1P49642 420 aaKnown RBP15.54■□□□□ 0.08
SND1-215ENST00000492772 ZCRB1Q8TBF4 217 aaKnown RBP15.54■□□□□ 0.08
SND1-215ENST00000492772 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
SND1-215ENST00000492772 GIGYF1O75420 1035 aaPredicted RBP15.53■□□□□ 0.08
SND1-215ENST00000492772 AMPHP49418 695 aa15.53■□□□□ 0.08
SND1-215ENST00000492772 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
SND1-215ENST00000492772 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
SND1-215ENST00000492772 USP47Q96K76 1375 aa15.52■□□□□ 0.08
SND1-215ENST00000492772 GOLGB1Q14789 3259 aaKnown RBP15.52■□□□□ 0.08
SND1-215ENST00000492772 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
SND1-215ENST00000492772 SLC24A1O60721 1099 aa15.52■□□□□ 0.08
SND1-215ENST00000492772 KCNQ4P56696 695 aa15.51■□□□□ 0.07
SND1-215ENST00000492772 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
SND1-215ENST00000492772 KIF20BQ96Q89 1820 aa15.5■□□□□ 0.07
SND1-215ENST00000492772 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
SND1-215ENST00000492772 TESK2Q96S53 571 aa15.5■□□□□ 0.07
SND1-215ENST00000492772 TAF1LQ8IZX4 1826 aa15.5■□□□□ 0.07
SND1-215ENST00000492772 GRIN3BO60391 1043 aa15.49■□□□□ 0.07
SND1-215ENST00000492772 MSH5O43196 834 aa15.48■□□□□ 0.07
SND1-215ENST00000492772 RAPGEF4Q8WZA2 1011 aa15.48■□□□□ 0.07
SND1-215ENST00000492772 PCDH11XQ9BZA7 1347 aa15.47■□□□□ 0.07
SND1-215ENST00000492772 PCDH11YQ9BZA8 1340 aa15.47■□□□□ 0.07
SND1-215ENST00000492772 COL23A1Q86Y22 540 aaPredicted RBP15.47■□□□□ 0.07
SND1-215ENST00000492772 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.07
SND1-215ENST00000492772 ST20-MTHFSA0A0A6YYL1 179 aa15.46■□□□□ 0.07
SND1-215ENST00000492772 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.072e-9■□□□□ 11.1
SND1-215ENST00000492772 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
SND1-215ENST00000492772 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
SND1-215ENST00000492772 KIF24Q5T7B8 1368 aa15.46■□□□□ 0.07
SND1-215ENST00000492772 C4BP0C0L5 1744 aa15.46■□□□□ 0.06
SND1-215ENST00000492772 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.06
SND1-215ENST00000492772 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
SND1-215ENST00000492772 FBLN1P23142 703 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
SND1-215ENST00000492772 FLAD1Q8NFF5 587 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 INSRP06213 1382 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 FLT4P35916 1363 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 ITGB4P16144 1822 aa15.45■□□□□ 0.06
SND1-215ENST00000492772 MSL1Q68DK7 614 aa15.44■□□□□ 0.06
SND1-215ENST00000492772 USHBP1Q8N6Y0 703 aa15.44■□□□□ 0.06
SND1-215ENST00000492772 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
SND1-215ENST00000492772 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
SND1-215ENST00000492772 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
SND1-215ENST00000492772 UBR3Q6ZT12 1888 aa15.43■□□□□ 0.06
SND1-215ENST00000492772 FYB1O15117 783 aa15.42■□□□□ 0.06
SND1-215ENST00000492772 GGNBP2Q9H3C7 697 aa15.42■□□□□ 0.06
SND1-215ENST00000492772 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
SND1-215ENST00000492772 TMF1P82094 1093 aa15.41■□□□□ 0.06
SND1-215ENST00000492772 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
SND1-215ENST00000492772 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
SND1-215ENST00000492772 ADCY9O60503 1353 aa15.39■□□□□ 0.05
SND1-215ENST00000492772 HSP90AB2PQ58FF8 381 aa15.39■□□□□ 0.05
SND1-215ENST00000492772 MPRIPQ6WCQ1 1025 aa15.39■□□□□ 0.05
SND1-215ENST00000492772 AK7Q96M32 723 aa15.39■□□□□ 0.05
SND1-215ENST00000492772 NCAPD2Q15021 1401 aa15.39■□□□□ 0.05
SND1-215ENST00000492772 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
SND1-215ENST00000492772 CYP27B1O15528 508 aa15.38■□□□□ 0.05
SND1-215ENST00000492772 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
SND1-215ENST00000492772 GPBP1L1Q9HC44 474 aaPredicted RBP15.37■□□□□ 0.05
SND1-215ENST00000492772 CICQ96RK0 1608 aaPredicted RBP15.35■□□□□ 0.05
SND1-215ENST00000492772 SSFA2P28290 1259 aa15.35■□□□□ 0.05
SND1-215ENST00000492772 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
SND1-215ENST00000492772 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
SND1-215ENST00000492772 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
SND1-215ENST00000492772 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
SND1-215ENST00000492772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
SND1-215ENST00000492772 PHF14O94880 888 aa15.33■□□□□ 0.04
SND1-215ENST00000492772 PIGBQ92521 554 aa15.33■□□□□ 0.04
SND1-215ENST00000492772 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
SND1-215ENST00000492772 KIF13BQ9NQT8 1826 aa15.32■□□□□ 0.04
SND1-215ENST00000492772 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
SND1-215ENST00000492772 PLEKHG2Q9H7P9 1386 aa15.32■□□□□ 0.04
SND1-215ENST00000492772 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
SND1-215ENST00000492772 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
SND1-215ENST00000492772 SIK1P57059 783 aa15.31■□□□□ 0.04
SND1-215ENST00000492772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.042e-11■■□□□ 12.9
SND1-215ENST00000492772 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
SND1-215ENST00000492772 HSPA6P17066 643 aa15.3■□□□□ 0.04
SND1-215ENST00000492772 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
SND1-215ENST00000492772 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
SND1-215ENST00000492772 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
SND1-215ENST00000492772 GNPATO15228 680 aa15.29■□□□□ 0.04
SND1-215ENST00000492772 ZNF526Q8TF50 670 aaPredicted RBP15.29■□□□□ 0.04
SND1-215ENST00000492772 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
SND1-215ENST00000492772 CARD14Q9BXL6 1004 aa15.28■□□□□ 0.04
SND1-215ENST00000492772 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
SND1-215ENST00000492772 ATP6V1AP38606 617 aa15.27■□□□□ 0.04
SND1-215ENST00000492772 IFNL2Q8IZJ0 200 aa15.27■□□□□ 0.04
SND1-215ENST00000492772 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.03
SND1-215ENST00000492772 KDRP35968 1356 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms