RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 USP21Q9UK80 565 aa28.87■■■□□ 2.21
PSPC1-204ENST00000492741 NWD2Q9ULI1 1742 aa28.87■■■□□ 2.21
PSPC1-204ENST00000492741 IL2RBP14784 551 aa28.86■■■□□ 2.21
PSPC1-204ENST00000492741 ZNF521Q96K83 1311 aa28.86■■■□□ 2.21
PSPC1-204ENST00000492741 RTF1Q92541 710 aaKnown RBP28.86■■■□□ 2.21
PSPC1-204ENST00000492741 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
PSPC1-204ENST00000492741 ZNF530Q6P9A1 599 aaPredicted RBP28.85■■■□□ 2.21
PSPC1-204ENST00000492741 PHF23Q9BUL5 403 aaPredicted RBP28.85■■■□□ 2.21
PSPC1-204ENST00000492741 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
PSPC1-204ENST00000492741 MEGF6O75095 1541 aa28.84■■■□□ 2.21
PSPC1-204ENST00000492741 NRAPQ86VF7 1730 aa28.83■■■□□ 2.21
PSPC1-204ENST00000492741 C1orf141Q5JVX7 400 aa28.83■■■□□ 2.21
PSPC1-204ENST00000492741 GNAT3A8MTJ3 354 aa28.83■■■□□ 2.21
PSPC1-204ENST00000492741 CDCA7LQ96GN5 454 aa28.83■■■□□ 2.21
PSPC1-204ENST00000492741 BCL9LQ86UU0 1499 aa28.81■■■□□ 2.2
PSPC1-204ENST00000492741 AFF2P51816 1311 aa28.81■■■□□ 2.2
PSPC1-204ENST00000492741 SPATA31A1Q5TZJ5 1347 aa28.81■■■□□ 2.2
PSPC1-204ENST00000492741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.81■■■□□ 2.26e-7■■■■□ 19.6
PSPC1-204ENST00000492741 DCTN1Q14203 1278 aa28.8■■■□□ 2.2
PSPC1-204ENST00000492741 SPATA31A5Q5VU36 1347 aa28.8■■■□□ 2.2
PSPC1-204ENST00000492741 SPATA31A7Q8IWB4 1347 aa28.8■■■□□ 2.2
PSPC1-204ENST00000492741 THRAP3Q9Y2W1 955 aaKnown RBP28.8■■■□□ 2.2
PSPC1-204ENST00000492741 MAP3K5Q99683 1374 aa28.79■■■□□ 2.2
PSPC1-204ENST00000492741 DLG5Q8TDM6 1919 aa28.79■■■□□ 2.2
PSPC1-204ENST00000492741 CALD1Q05682 793 aaKnown RBP28.79■■■□□ 2.2
PSPC1-204ENST00000492741 VPS72Q15906 364 aa28.79■■■□□ 2.2
PSPC1-204ENST00000492741 AKAP4Q5JQC9 854 aa28.79■■■□□ 2.2
PSPC1-204ENST00000492741 MCM10Q7L590 875 aa28.79■■■□□ 2.2
PSPC1-204ENST00000492741 THUMPD2Q9BTF0 503 aaKnown RBP28.79■■■□□ 2.2
PSPC1-204ENST00000492741 HTATSF1O43719 755 aaKnown RBP28.78■■■□□ 2.2
PSPC1-204ENST00000492741 ZCRB1Q8TBF4 217 aaKnown RBP28.78■■■□□ 2.2
PSPC1-204ENST00000492741 OVOS2A0A0G2JMS6 1433 aa28.78■■■□□ 2.2
PSPC1-204ENST00000492741 PLEKHG2Q9H7P9 1386 aa28.78■■■□□ 2.2
PSPC1-204ENST00000492741 E9PSI1 815 aa28.77■■■□□ 2.2
PSPC1-204ENST00000492741 PARP4Q9UKK3 1724 aaKnown RBP28.75■■■□□ 2.19
PSPC1-204ENST00000492741 SLFN5Q08AF3 891 aa28.75■■■□□ 2.19
PSPC1-204ENST00000492741 LAS1LQ9Y4W2 734 aaKnown RBP28.75■■■□□ 2.19
PSPC1-204ENST00000492741 IFNL2Q8IZJ0 200 aa28.74■■■□□ 2.19
PSPC1-204ENST00000492741 SPINK5Q9NQ38 1064 aaPredicted RBP28.74■■■□□ 2.19
PSPC1-204ENST00000492741 CDCA7Q9BWT1 371 aaPredicted RBP28.74■■■□□ 2.19
PSPC1-204ENST00000492741 IL16Q14005 1332 aa28.73■■■□□ 2.19
PSPC1-204ENST00000492741 DDX54Q8TDD1 881 aaKnown RBP28.72■■■□□ 2.19
PSPC1-204ENST00000492741 PCDH11XQ9BZA7 1347 aa28.72■■■□□ 2.19
PSPC1-204ENST00000492741 PCDH11YQ9BZA8 1340 aa28.72■■■□□ 2.19
PSPC1-204ENST00000492741 PHKG2P15735 406 aa28.72■■■□□ 2.19
PSPC1-204ENST00000492741 MPRIPQ6WCQ1 1025 aa28.72■■■□□ 2.19
PSPC1-204ENST00000492741 MYH16Q9H6N6 1097 aa28.72■■■□□ 2.19
PSPC1-204ENST00000492741 EXOC5O00471 708 aa28.71■■■□□ 2.19
PSPC1-204ENST00000492741 BARGINQ6ZT62 677 aa28.71■■■□□ 2.19
PSPC1-204ENST00000492741 TRPC5Q9UL62 973 aaPredicted RBP28.71■■■□□ 2.19
PSPC1-204ENST00000492741 IL17REQ8NFR9 667 aa28.7■■■□□ 2.19
PSPC1-204ENST00000492741 DISP2A7MBM2 1401 aa28.7■■■□□ 2.18
PSPC1-204ENST00000492741 CYP27B1O15528 508 aa28.69■■■□□ 2.18
PSPC1-204ENST00000492741 FAM98CQ17RN3 349 aaKnown RBP28.69■■■□□ 2.18
PSPC1-204ENST00000492741 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.69■■■□□ 2.18
PSPC1-204ENST00000492741 DUSP27Q5VZP5 1158 aa28.69■■■□□ 2.18
PSPC1-204ENST00000492741 LGR6Q9HBX8 967 aa28.69■■■□□ 2.18
PSPC1-204ENST00000492741 PKD1L3Q7Z443 1732 aa28.68■■■□□ 2.18
PSPC1-204ENST00000492741 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
PSPC1-204ENST00000492741 GNAI1P63096 354 aa28.68■■■□□ 2.18
PSPC1-204ENST00000492741 QTRT2Q9H974 415 aaKnown RBP28.68■■■□□ 2.18
PSPC1-204ENST00000492741 A0A0G2JS52 829 aa28.67■■■□□ 2.18
PSPC1-204ENST00000492741 MYT1Q01538 1121 aa28.67■■■□□ 2.18
PSPC1-204ENST00000492741 GJD4Q96KN9 370 aaPredicted RBP28.67■■■□□ 2.18
PSPC1-204ENST00000492741 IFT57Q9NWB7 429 aa28.67■■■□□ 2.18
PSPC1-204ENST00000492741 RNMTO43148 476 aaKnown RBP28.66■■■□□ 2.18
PSPC1-204ENST00000492741 TRMT2AQ8IZ69 625 aaKnown RBP28.66■■■□□ 2.18
PSPC1-204ENST00000492741 DDB1Q16531 1140 aa28.66■■■□□ 2.18
PSPC1-204ENST00000492741 CFAP44Q96MT7 982 aa28.66■■■□□ 2.18
PSPC1-204ENST00000492741 TEFQ10587 303 aa28.65■■■□□ 2.18
PSPC1-204ENST00000492741 TSR2Q969E8 191 aaKnown RBP28.65■■■□□ 2.18
PSPC1-204ENST00000492741 DCAF5Q96JK2 942 aa28.64■■■□□ 2.18
PSPC1-204ENST00000492741 ATRNO75882 1429 aa28.63■■■□□ 2.17
PSPC1-204ENST00000492741 ZNF772Q68DY9 489 aaPredicted RBP28.63■■■□□ 2.17
PSPC1-204ENST00000492741 CEMIPQ8WUJ3 1361 aa28.61■■■□□ 2.17
PSPC1-204ENST00000492741 FANCIQ9NVI1 1328 aa28.61■■■□□ 2.17
PSPC1-204ENST00000492741 TAF7Q15545 349 aaPredicted RBP28.61■■■□□ 2.17
PSPC1-204ENST00000492741 WNK3Q9BYP7 1800 aa28.61■■■□□ 2.17
PSPC1-204ENST00000492741 ZNF853P0CG23 659 aa28.6■■■□□ 2.17
PSPC1-204ENST00000492741 MBIPQ9NS73 344 aa28.6■■■□□ 2.17
PSPC1-204ENST00000492741 MIS18AQ9NYP9 233 aa28.6■■■□□ 2.17
PSPC1-204ENST00000492741 TSPYL4Q9UJ04 414 aa28.59■■■□□ 2.17
PSPC1-204ENST00000492741 TNS2Q63HR2 1409 aa28.59■■■□□ 2.17
PSPC1-204ENST00000492741 CHL1O00533 1208 aa28.58■■■□□ 2.17
PSPC1-204ENST00000492741 NKX1-1Q15270 411 aaPredicted RBP28.57■■■□□ 2.16
PSPC1-204ENST00000492741 KDM6AO15550 1401 aaPredicted RBP28.57■■■□□ 2.16
PSPC1-204ENST00000492741 CABP4P57796 275 aa28.55■■■□□ 2.16
PSPC1-204ENST00000492741 SHANK3Q9BYB0 1731 aa28.55■■■□□ 2.16
PSPC1-204ENST00000492741 EXOSC9Q06265 439 aaKnown RBP28.55■■■□□ 2.16
PSPC1-204ENST00000492741 SLC52A2Q9HAB3 445 aa28.55■■■□□ 2.16
PSPC1-204ENST00000492741 GLI3P10071 1580 aa28.54■■■□□ 2.16
PSPC1-204ENST00000492741 BTBD11A6QL63 1104 aa28.54■■■□□ 2.16
PSPC1-204ENST00000492741 BABAM1Q9NWV8 329 aa28.54■■■□□ 2.16
PSPC1-204ENST00000492741 LRRC37A3O60309 1634 aa28.53■■■□□ 2.16
PSPC1-204ENST00000492741 NFATC2IPQ8NCF5 419 aa28.53■■■□□ 2.16
PSPC1-204ENST00000492741 SCN11AQ9UI33 1791 aa28.52■■■□□ 2.16
PSPC1-204ENST00000492741 ERVV-2B6SEH9 535 aa28.52■■■□□ 2.16
PSPC1-204ENST00000492741 VIRMAQ69YN4 1812 aaKnown RBP28.51■■■□□ 2.15
PSPC1-204ENST00000492741 RCAN3Q9UKA8 241 aa28.51■■■□□ 2.15
PSPC1-204ENST00000492741 MARCH10Q8NA82 808 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 1216.9 ms