RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ITSN1Q15811 1721 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 C10orf71Q711Q0 1435 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 FLAD1Q8NFF5 587 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 CFAP44Q96MT7 982 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 CDK19Q9BWU1 502 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 ABCC6O95255 1503 aa8.07□□□□□ -1.12
SEC13-219ENST00000492602 SOX12O15370 315 aa8.06□□□□□ -1.12
SEC13-219ENST00000492602 IL2RBP14784 551 aa8.06□□□□□ -1.12
SEC13-219ENST00000492602 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
SEC13-219ENST00000492602 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
SEC13-219ENST00000492602 COL18A1P39060 1754 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 FCHSD2O94868 740 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
SEC13-219ENST00000492602 SMIM5Q71RC9 77 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 RNF181Q9P0P0 153 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 PXDNLA1KZ92 1463 aa8.05□□□□□ -1.12
SEC13-219ENST00000492602 A0A0G2JLW4 131 aa8.04□□□□□ -1.12
SEC13-219ENST00000492602 CREBZFQ9NS37 354 aa8.04□□□□□ -1.12
SEC13-219ENST00000492602 NLRP2Q9NX02 1062 aa8.04□□□□□ -1.12
SEC13-219ENST00000492602 PIK3C2AO00443 1686 aa8.04□□□□□ -1.12
SEC13-219ENST00000492602 SLIT3O75094 1523 aa8.03□□□□□ -1.12
SEC13-219ENST00000492602 PHF14O94880 888 aa8.03□□□□□ -1.12
SEC13-219ENST00000492602 VEGFAP15692 232 aaPredicted RBP8.03□□□□□ -1.12
SEC13-219ENST00000492602 TGFB2P61812 414 aa8.03□□□□□ -1.12
SEC13-219ENST00000492602 ERBB3P21860 1342 aa8.03□□□□□ -1.12
SEC13-219ENST00000492602 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
SEC13-219ENST00000492602 USP47Q96K76 1375 aa8.02□□□□□ -1.13
SEC13-219ENST00000492602 KCNH5Q8NCM2 988 aa8.02□□□□□ -1.13
SEC13-219ENST00000492602 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
SEC13-219ENST00000492602 ADGRB1O14514 1584 aa8.01□□□□□ -1.13
SEC13-219ENST00000492602 HSPA8P11142 646 aaKnown RBP8.01□□□□□ -1.13
SEC13-219ENST00000492602 AK7Q96M32 723 aa8.01□□□□□ -1.13
SEC13-219ENST00000492602 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
SEC13-219ENST00000492602 TNRC6CQ9HCJ0 1690 aaKnown RBP8.01□□□□□ -1.13
SEC13-219ENST00000492602 LY75O60449 1722 aa8□□□□□ -1.13
SEC13-219ENST00000492602 NSD2O96028 1365 aa8□□□□□ -1.13
SEC13-219ENST00000492602 CNTNAP1P78357 1384 aa8□□□□□ -1.13
SEC13-219ENST00000492602 PDE4DIPQ5VU43 2346 aa8□□□□□ -1.13
SEC13-219ENST00000492602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8□□□□□ -1.13
SEC13-219ENST00000492602 DPEP1P16444 411 aa8□□□□□ -1.13
SEC13-219ENST00000492602 VEGFBP49765 207 aa8□□□□□ -1.13
SEC13-219ENST00000492602 AMIGO3Q86WK7 504 aa8□□□□□ -1.13
SEC13-219ENST00000492602 MMP10P09238 476 aa7.99□□□□□ -1.13
SEC13-219ENST00000492602 HMGB2P26583 209 aaKnown RBP7.99□□□□□ -1.13
SEC13-219ENST00000492602 SRPK2P78362 688 aaKnown RBP7.99□□□□□ -1.13
SEC13-219ENST00000492602 PKD1L3Q7Z443 1732 aa7.99□□□□□ -1.13
SEC13-219ENST00000492602 N4BP2Q86UW6 1770 aaPredicted RBP7.98□□□□□ -1.13
SEC13-219ENST00000492602 GLTPD2A6NH11 291 aa7.98□□□□□ -1.13
SEC13-219ENST00000492602 ADRA2BP18089 450 aa7.98□□□□□ -1.13
SEC13-219ENST00000492602 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
SEC13-219ENST00000492602 CABP2Q9NPB3 220 aa7.97□□□□□ -1.13
SEC13-219ENST00000492602 CABP1Q9NZU7 370 aa7.97□□□□□ -1.13
SEC13-219ENST00000492602 USP54Q70EL1 1684 aa7.97□□□□□ -1.13
SEC13-219ENST00000492602 SSFA2P28290 1259 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 MAP2K1Q02750 393 aaPredicted RBP7.96□□□□□ -1.14
SEC13-219ENST00000492602 DALRD3Q5D0E6 543 aaKnown RBP7.96□□□□□ -1.14
SEC13-219ENST00000492602 CHADLQ6NUI6 762 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 DCAF5Q96JK2 942 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.14
SEC13-219ENST00000492602 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.14
SEC13-219ENST00000492602 C5P01031 1676 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 DOT1LQ8TEK3 1739 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 POTECB2RU33 542 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 KCNA3P22001 575 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 PALLDQ8WX93 1383 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 TNRC18O15417 2968 aaPredicted RBP7.95□□□□□ -1.14
SEC13-219ENST00000492602 KIAA1551Q9HCM1 1747 aa7.95□□□□□ -1.14
SEC13-219ENST00000492602 RASSF7Q02833 373 aa7.94□□□□□ -1.14
SEC13-219ENST00000492602 MPHOSPH9Q99550 1183 aa7.94□□□□□ -1.14
SEC13-219ENST00000492602 MCOLN1Q9GZU1 580 aa7.94□□□□□ -1.14
SEC13-219ENST00000492602 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
SEC13-219ENST00000492602 QRICH2Q9H0J4 1663 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 C4BP0C0L5 1744 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 ZCRB1Q8TBF4 217 aaKnown RBP7.93□□□□□ -1.14
SEC13-219ENST00000492602 BEGAINQ9BUH8 593 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 TTC21BQ7Z4L5 1316 aa7.93□□□□□ -1.14
SEC13-219ENST00000492602 KIF13BQ9NQT8 1826 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 GNPATO15228 680 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 LMNB1P20700 586 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 DEFB115Q30KQ5 88 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 MPRIPQ6WCQ1 1025 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 NLGN1Q8N2Q7 840 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 PARP3Q9Y6F1 533 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 NFAT5O94916 1531 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 TOGARAM1Q9Y4F4 1720 aa7.92□□□□□ -1.14
SEC13-219ENST00000492602 TMF1P82094 1093 aa7.91□□□□□ -1.14
SEC13-219ENST00000492602 DCAF11Q8TEB1 546 aa7.91□□□□□ -1.14
SEC13-219ENST00000492602 LTV1Q96GA3 475 aaPredicted RBP7.91□□□□□ -1.14
SEC13-219ENST00000492602 TSKSQ9UJT2 592 aa7.91□□□□□ -1.14
SEC13-219ENST00000492602 PASKQ96RG2 1323 aa7.91□□□□□ -1.14
SEC13-219ENST00000492602 WDR33Q9C0J8 1336 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms