RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 NHSQ6T4R5 1651 aa16.27■□□□□ 0.19
MDC1-207ENST00000492462 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
MDC1-207ENST00000492462 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
MDC1-207ENST00000492462 KIF7Q2M1P5 1343 aa16.25■□□□□ 0.19
MDC1-207ENST00000492462 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
MDC1-207ENST00000492462 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
MDC1-207ENST00000492462 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
MDC1-207ENST00000492462 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
MDC1-207ENST00000492462 PLSCR1O15162 318 aa16.24■□□□□ 0.19
MDC1-207ENST00000492462 PROM2Q8N271 834 aa16.24■□□□□ 0.19
MDC1-207ENST00000492462 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
MDC1-207ENST00000492462 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
MDC1-207ENST00000492462 BTAF1O14981 1849 aa16.23■□□□□ 0.19
MDC1-207ENST00000492462 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
MDC1-207ENST00000492462 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
MDC1-207ENST00000492462 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
MDC1-207ENST00000492462 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
MDC1-207ENST00000492462 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
MDC1-207ENST00000492462 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
MDC1-207ENST00000492462 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
MDC1-207ENST00000492462 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
MDC1-207ENST00000492462 EYA1Q99502 592 aa16.18■□□□□ 0.18
MDC1-207ENST00000492462 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
MDC1-207ENST00000492462 NSD2O96028 1365 aa16.17■□□□□ 0.18
MDC1-207ENST00000492462 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
MDC1-207ENST00000492462 KNSTRNQ9Y448 316 aa16.17■□□□□ 0.18
MDC1-207ENST00000492462 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
MDC1-207ENST00000492462 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
MDC1-207ENST00000492462 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
MDC1-207ENST00000492462 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
MDC1-207ENST00000492462 PKD1L3Q7Z443 1732 aa16.15■□□□□ 0.18
MDC1-207ENST00000492462 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
MDC1-207ENST00000492462 PDGFDQ9GZP0 370 aaPredicted RBP16.15■□□□□ 0.18
MDC1-207ENST00000492462 CHD4Q14839 1912 aa16.15■□□□□ 0.18
MDC1-207ENST00000492462 CYP27B1O15528 508 aa16.14■□□□□ 0.17
MDC1-207ENST00000492462 PER1O15534 1290 aaPredicted RBP16.14■□□□□ 0.17
MDC1-207ENST00000492462 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
MDC1-207ENST00000492462 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
MDC1-207ENST00000492462 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
MDC1-207ENST00000492462 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
MDC1-207ENST00000492462 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
MDC1-207ENST00000492462 PCDH11XQ9BZA7 1347 aa16.12■□□□□ 0.17
MDC1-207ENST00000492462 PCDH11YQ9BZA8 1340 aa16.12■□□□□ 0.17
MDC1-207ENST00000492462 KCNQ4P56696 695 aa16.11■□□□□ 0.17
MDC1-207ENST00000492462 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
MDC1-207ENST00000492462 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
MDC1-207ENST00000492462 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
MDC1-207ENST00000492462 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
MDC1-207ENST00000492462 LY75O60449 1722 aa16.1■□□□□ 0.17
MDC1-207ENST00000492462 ITGB4P16144 1822 aa16.1■□□□□ 0.17
MDC1-207ENST00000492462 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
MDC1-207ENST00000492462 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
MDC1-207ENST00000492462 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
MDC1-207ENST00000492462 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
MDC1-207ENST00000492462 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
MDC1-207ENST00000492462 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
MDC1-207ENST00000492462 IL13P35225 146 aa16.05■□□□□ 0.16
MDC1-207ENST00000492462 MTHFSP49914 203 aa16.05■□□□□ 0.16
MDC1-207ENST00000492462 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
MDC1-207ENST00000492462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■□□□□ 10.8
MDC1-207ENST00000492462 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
MDC1-207ENST00000492462 PHKG2P15735 406 aa16.04■□□□□ 0.16
MDC1-207ENST00000492462 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
MDC1-207ENST00000492462 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
MDC1-207ENST00000492462 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
MDC1-207ENST00000492462 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
MDC1-207ENST00000492462 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
MDC1-207ENST00000492462 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.16
MDC1-207ENST00000492462 PIGBQ92521 554 aa16.02■□□□□ 0.16
MDC1-207ENST00000492462 PALLDQ8WX93 1383 aa16.01■□□□□ 0.15
MDC1-207ENST00000492462 NPC1L1Q9UHC9 1359 aa16.01■□□□□ 0.15
MDC1-207ENST00000492462 PTGER2P43116 358 aa16.01■□□□□ 0.15
MDC1-207ENST00000492462 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
MDC1-207ENST00000492462 QSER1Q2KHR3 1735 aa16■□□□□ 0.15
MDC1-207ENST00000492462 KDRP35968 1356 aa16■□□□□ 0.15
MDC1-207ENST00000492462 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
MDC1-207ENST00000492462 C5P01031 1676 aa15.99■□□□□ 0.15
MDC1-207ENST00000492462 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
MDC1-207ENST00000492462 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
MDC1-207ENST00000492462 SYT17Q9BSW7 474 aa15.99■□□□□ 0.15
MDC1-207ENST00000492462 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
MDC1-207ENST00000492462 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
MDC1-207ENST00000492462 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
MDC1-207ENST00000492462 HMOX1P09601 288 aa15.98■□□□□ 0.15
MDC1-207ENST00000492462 SGIP1Q9BQI5 828 aa15.97■□□□□ 0.15
MDC1-207ENST00000492462 MTFR1LQ9H019 292 aa15.97■□□□□ 0.15
MDC1-207ENST00000492462 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
MDC1-207ENST00000492462 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
MDC1-207ENST00000492462 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
MDC1-207ENST00000492462 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
MDC1-207ENST00000492462 AMOTQ4VCS5 1084 aa15.96■□□□□ 0.15
MDC1-207ENST00000492462 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.15
MDC1-207ENST00000492462 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
MDC1-207ENST00000492462 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
MDC1-207ENST00000492462 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
MDC1-207ENST00000492462 SMIM5Q71RC9 77 aa15.94■□□□□ 0.14
MDC1-207ENST00000492462 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
MDC1-207ENST00000492462 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
MDC1-207ENST00000492462 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
MDC1-207ENST00000492462 SCN11AQ9UI33 1791 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms