RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 NEFMP07197 916 aa19.6■□□□□ 0.73
COPS7B-222ENST00000492423 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
COPS7B-222ENST00000492423 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
COPS7B-222ENST00000492423 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
COPS7B-222ENST00000492423 TRIM35Q9UPQ4 493 aa19.59■□□□□ 0.73
COPS7B-222ENST00000492423 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
COPS7B-222ENST00000492423 MEGF6O75095 1541 aa19.58■□□□□ 0.73
COPS7B-222ENST00000492423 CDCA7LQ96GN5 454 aa19.58■□□□□ 0.72
COPS7B-222ENST00000492423 SLIT2O94813 1529 aa19.57■□□□□ 0.72
COPS7B-222ENST00000492423 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.57■□□□□ 0.72
COPS7B-222ENST00000492423 CSB-PGBD3P0DP91 1061 aa19.57■□□□□ 0.72
COPS7B-222ENST00000492423 RIPK4P57078 832 aa19.57■□□□□ 0.72
COPS7B-222ENST00000492423 NUTM2BA6NNL0 878 aaPredicted RBP19.56■□□□□ 0.72
COPS7B-222ENST00000492423 NUTM2EB1AL46 878 aaPredicted RBP19.56■□□□□ 0.72
COPS7B-222ENST00000492423 NUTM2AQ8IVF1 878 aaPredicted RBP19.56■□□□□ 0.72
COPS7B-222ENST00000492423 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
COPS7B-222ENST00000492423 SPATA31A6Q5VVP1 1343 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 ADAMTS2O95450 1211 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 CRB1P82279 1406 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
COPS7B-222ENST00000492423 BTG4Q9NY30 223 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 PLEKHG2Q9H7P9 1386 aa19.55■□□□□ 0.72
COPS7B-222ENST00000492423 WDR63Q8IWG1 891 aa19.54■□□□□ 0.72
COPS7B-222ENST00000492423 SLFN5Q08AF3 891 aa19.53■□□□□ 0.72
COPS7B-222ENST00000492423 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
COPS7B-222ENST00000492423 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
COPS7B-222ENST00000492423 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
COPS7B-222ENST00000492423 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
COPS7B-222ENST00000492423 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
COPS7B-222ENST00000492423 OVOS2A0A0G2JMS6 1433 aa19.51■□□□□ 0.71
COPS7B-222ENST00000492423 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
COPS7B-222ENST00000492423 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
COPS7B-222ENST00000492423 SIPA1L3O60292 1781 aaPredicted RBP19.51■□□□□ 0.71
COPS7B-222ENST00000492423 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
COPS7B-222ENST00000492423 DUSP27Q5VZP5 1158 aa19.5■□□□□ 0.71
COPS7B-222ENST00000492423 IL16Q14005 1332 aa19.5■□□□□ 0.71
COPS7B-222ENST00000492423 MAP3K5Q99683 1374 aa19.49■□□□□ 0.71
COPS7B-222ENST00000492423 E9PSI1 815 aa19.49■□□□□ 0.71
COPS7B-222ENST00000492423 EVA1CP58658 441 aa19.49■□□□□ 0.71
COPS7B-222ENST00000492423 DISP2A7MBM2 1401 aa19.49■□□□□ 0.71
COPS7B-222ENST00000492423 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
COPS7B-222ENST00000492423 THUMPD2Q9BTF0 503 aaKnown RBP19.48■□□□□ 0.71
COPS7B-222ENST00000492423 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
COPS7B-222ENST00000492423 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
COPS7B-222ENST00000492423 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
COPS7B-222ENST00000492423 PLEKHO1Q53GL0 409 aaPredicted RBP19.47■□□□□ 0.71
COPS7B-222ENST00000492423 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
COPS7B-222ENST00000492423 BCL9LQ86UU0 1499 aa19.46■□□□□ 0.71
COPS7B-222ENST00000492423 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
COPS7B-222ENST00000492423 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
COPS7B-222ENST00000492423 ZNF530Q6P9A1 599 aaPredicted RBP19.45■□□□□ 0.7
COPS7B-222ENST00000492423 GNAT3A8MTJ3 354 aa19.44■□□□□ 0.7
COPS7B-222ENST00000492423 MCM10Q7L590 875 aa19.44■□□□□ 0.7
COPS7B-222ENST00000492423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
COPS7B-222ENST00000492423 C8orf37Q96NL8 207 aa19.43■□□□□ 0.7
COPS7B-222ENST00000492423 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
COPS7B-222ENST00000492423 CEMIPQ8WUJ3 1361 aa19.43■□□□□ 0.7
COPS7B-222ENST00000492423 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
COPS7B-222ENST00000492423 IL2RBP14784 551 aa19.42■□□□□ 0.7
COPS7B-222ENST00000492423 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
COPS7B-222ENST00000492423 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
COPS7B-222ENST00000492423 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
COPS7B-222ENST00000492423 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
COPS7B-222ENST00000492423 FNBP4Q8N3X1 1017 aaPredicted RBP19.41■□□□□ 0.7
COPS7B-222ENST00000492423 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
COPS7B-222ENST00000492423 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
COPS7B-222ENST00000492423 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
COPS7B-222ENST00000492423 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 SPATA31A5Q5VU36 1347 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 SPATA31A7Q8IWB4 1347 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 MRC1P22897 1456 aa19.4■□□□□ 0.7
COPS7B-222ENST00000492423 GNAI1P63096 354 aa19.39■□□□□ 0.69
COPS7B-222ENST00000492423 NGLY1Q96IV0 654 aa19.39■□□□□ 0.69
COPS7B-222ENST00000492423 USP35Q9P2H5 1018 aa19.39■□□□□ 0.69
COPS7B-222ENST00000492423 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
COPS7B-222ENST00000492423 GLI3P10071 1580 aa19.39■□□□□ 0.69
COPS7B-222ENST00000492423 CYP27B1O15528 508 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 PHKG2P15735 406 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 TNS2Q63HR2 1409 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 CFAP44Q96MT7 982 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 THSD7AQ9UPZ6 1657 aa19.38■□□□□ 0.69
COPS7B-222ENST00000492423 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
COPS7B-222ENST00000492423 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 VPS72Q15906 364 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 MEX3CQ5U5Q3 659 aaKnown RBP19.36■□□□□ 0.69
COPS7B-222ENST00000492423 ZCRB1Q8TBF4 217 aaKnown RBP19.36■□□□□ 0.69
COPS7B-222ENST00000492423 LGR6Q9HBX8 967 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 ITGB4P16144 1822 aa19.36■□□□□ 0.69
COPS7B-222ENST00000492423 CHL1O00533 1208 aa19.35■□□□□ 0.69
COPS7B-222ENST00000492423 MPRIPQ6WCQ1 1025 aa19.35■□□□□ 0.69
COPS7B-222ENST00000492423 IFNL2Q8IZJ0 200 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms