RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 IL13P35225 146 aa15□□□□□ -0.01
TMC1-205ENST00000492418 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
TMC1-205ENST00000492418 IGSF1Q8N6C5 1336 aa14.99□□□□□ -0.01
TMC1-205ENST00000492418 PCDH11XQ9BZA7 1347 aa14.99□□□□□ -0.01
TMC1-205ENST00000492418 PCDH11YQ9BZA8 1340 aa14.99□□□□□ -0.01
TMC1-205ENST00000492418 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
TMC1-205ENST00000492418 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
TMC1-205ENST00000492418 EP400Q96L91 3159 aa14.98□□□□□ -0.01
TMC1-205ENST00000492418 MEGF6O75095 1541 aa14.98□□□□□ -0.01
TMC1-205ENST00000492418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.98□□□□□ -0.01
TMC1-205ENST00000492418 AMOTQ4VCS5 1084 aa14.97□□□□□ -0.01
TMC1-205ENST00000492418 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
TMC1-205ENST00000492418 ACSBG1Q96GR2 724 aa14.97□□□□□ -0.01
TMC1-205ENST00000492418 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
TMC1-205ENST00000492418 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.02
TMC1-205ENST00000492418 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 BCL9O00512 1426 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 HMOX1P09601 288 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
TMC1-205ENST00000492418 C1orf141Q5JVX7 400 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
TMC1-205ENST00000492418 NEFMP07197 916 aa14.94□□□□□ -0.02
TMC1-205ENST00000492418 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
TMC1-205ENST00000492418 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
TMC1-205ENST00000492418 NCAPD2Q15021 1401 aa14.93□□□□□ -0.02
TMC1-205ENST00000492418 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
TMC1-205ENST00000492418 U2AF1L5P0DN76 240 aaPredicted RBP14.93□□□□□ -0.02
TMC1-205ENST00000492418 U2AF1Q01081 240 aaKnown RBP eCLIP14.93□□□□□ -0.02
TMC1-205ENST00000492418 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
TMC1-205ENST00000492418 CYP27B1O15528 508 aa14.92□□□□□ -0.02
TMC1-205ENST00000492418 KCNQ2O43526 872 aa14.92□□□□□ -0.02
TMC1-205ENST00000492418 PRIM1P49642 420 aaKnown RBP14.92□□□□□ -0.02
TMC1-205ENST00000492418 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
TMC1-205ENST00000492418 KDRP35968 1356 aa14.91□□□□□ -0.02
TMC1-205ENST00000492418 PLSCR1O15162 318 aa14.91□□□□□ -0.02
TMC1-205ENST00000492418 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
TMC1-205ENST00000492418 ANP32CO43423 234 aa14.9□□□□□ -0.02
TMC1-205ENST00000492418 PHKG2P15735 406 aa14.9□□□□□ -0.02
TMC1-205ENST00000492418 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
TMC1-205ENST00000492418 MPRIPQ6WCQ1 1025 aa14.9□□□□□ -0.02
TMC1-205ENST00000492418 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
TMC1-205ENST00000492418 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
TMC1-205ENST00000492418 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
TMC1-205ENST00000492418 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
TMC1-205ENST00000492418 CAMKK2Q96RR4 588 aa14.89□□□□□ -0.03
TMC1-205ENST00000492418 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
TMC1-205ENST00000492418 FCHSD2O94868 740 aa14.88□□□□□ -0.03
TMC1-205ENST00000492418 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
TMC1-205ENST00000492418 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
TMC1-205ENST00000492418 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
TMC1-205ENST00000492418 HMGB2P26583 209 aaKnown RBP14.87□□□□□ -0.03
TMC1-205ENST00000492418 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
TMC1-205ENST00000492418 PKD1L3Q7Z443 1732 aa14.86□□□□□ -0.03
TMC1-205ENST00000492418 TNS1Q9HBL0 1735 aaKnown RBP14.86□□□□□ -0.03
TMC1-205ENST00000492418 ERVV-2B6SEH9 535 aa14.86□□□□□ -0.03
TMC1-205ENST00000492418 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
TMC1-205ENST00000492418 CABP4P57796 275 aa14.86□□□□□ -0.03
TMC1-205ENST00000492418 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
TMC1-205ENST00000492418 AKAP4Q5JQC9 854 aa14.86□□□□□ -0.03
TMC1-205ENST00000492418 NHSQ6T4R5 1651 aa14.85□□□□□ -0.03
TMC1-205ENST00000492418 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
TMC1-205ENST00000492418 SMARCC1Q92922 1105 aaPredicted RBP14.85□□□□□ -0.03
TMC1-205ENST00000492418 SHANK3Q9BYB0 1731 aa14.84□□□□□ -0.03
TMC1-205ENST00000492418 MTHFSDQ2M296 383 aaKnown RBP14.84□□□□□ -0.03
TMC1-205ENST00000492418 RSPH6AQ9H0K4 717 aa14.84□□□□□ -0.03
TMC1-205ENST00000492418 RTF1Q92541 710 aaKnown RBP14.83□□□□□ -0.04
TMC1-205ENST00000492418 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
TMC1-205ENST00000492418 GNAT3A8MTJ3 354 aa14.82□□□□□ -0.04
TMC1-205ENST00000492418 SLC27A3Q5K4L6 730 aa14.82□□□□□ -0.04
TMC1-205ENST00000492418 DOT1LQ8TEK3 1739 aa14.82□□□□□ -0.04
TMC1-205ENST00000492418 PIGBQ92521 554 aa14.81□□□□□ -0.04
TMC1-205ENST00000492418 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
TMC1-205ENST00000492418 BTAF1O14981 1849 aa14.8□□□□□ -0.04
TMC1-205ENST00000492418 NFATC2IPQ8NCF5 419 aa14.8□□□□□ -0.04
TMC1-205ENST00000492418 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
TMC1-205ENST00000492418 CCNL1Q9UK58 526 aaPredicted RBP14.8□□□□□ -0.04
TMC1-205ENST00000492418 TEFQ10587 303 aa14.79□□□□□ -0.04
TMC1-205ENST00000492418 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
TMC1-205ENST00000492418 PROM2Q8N271 834 aa14.79□□□□□ -0.04
TMC1-205ENST00000492418 PALLDQ8WX93 1383 aa14.78□□□□□ -0.04
TMC1-205ENST00000492418 MAP3K5Q99683 1374 aa14.78□□□□□ -0.04
TMC1-205ENST00000492418 PSDA5PKW4 1024 aaPredicted RBP14.78□□□□□ -0.04
TMC1-205ENST00000492418 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
TMC1-205ENST00000492418 LGR6Q9HBX8 967 aa14.78□□□□□ -0.04
TMC1-205ENST00000492418 RGPD3A6NKT7 1758 aaPredicted RBP14.78□□□□□ -0.04
TMC1-205ENST00000492418 RGPD4Q7Z3J3 1758 aa14.78□□□□□ -0.04
TMC1-205ENST00000492418 SLC52A2Q9HAB3 445 aa14.77□□□□□ -0.05
TMC1-205ENST00000492418 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
TMC1-205ENST00000492418 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
TMC1-205ENST00000492418 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
TMC1-205ENST00000492418 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
TMC1-205ENST00000492418 ITGB4P16144 1822 aa14.76□□□□□ -0.05
TMC1-205ENST00000492418 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
TMC1-205ENST00000492418 NFE2L2Q16236 605 aa14.75□□□□□ -0.05
TMC1-205ENST00000492418 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
TMC1-205ENST00000492418 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
TMC1-205ENST00000492418 ATP6V1AP38606 617 aa14.74□□□□□ -0.05
TMC1-205ENST00000492418 KCNQ4P56696 695 aa14.74□□□□□ -0.05
TMC1-205ENST00000492418 SIK1P57059 783 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms