RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
TNFRSF1B-203ENST00000492361 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1B-203ENST00000492361 IQSEC2Q5JU85 1478 aa18.6■□□□□ 0.57
TNFRSF1B-203ENST00000492361 RABEP1Q15276 862 aa18.6■□□□□ 0.57
TNFRSF1B-203ENST00000492361 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
TNFRSF1B-203ENST00000492361 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
TNFRSF1B-203ENST00000492361 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1B-203ENST00000492361 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
TNFRSF1B-203ENST00000492361 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
TNFRSF1B-203ENST00000492361 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.57
TNFRSF1B-203ENST00000492361 ESPNB1AK53 854 aa18.58■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ERC2O15083 957 aa18.58■□□□□ 0.56
TNFRSF1B-203ENST00000492361 MCCP23508 829 aa18.58■□□□□ 0.56
TNFRSF1B-203ENST00000492361 EYA1Q99502 592 aa18.58■□□□□ 0.56
TNFRSF1B-203ENST00000492361 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ARHGAP45Q92619 1136 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 KIF2CQ99661 725 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 MROH1Q8NDA8 1641 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 LTKP29376 864 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 FLIIQ13045 1269 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 DNTTIP2Q5QJE6 756 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 PHAXQ9H814 394 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SYCE3A1L190 88 aa18.56■□□□□ 0.56
TNFRSF1B-203ENST00000492361 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
TNFRSF1B-203ENST00000492361 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1B-203ENST00000492361 USP26Q9BXU7 913 aa18.56■□□□□ 0.56
TNFRSF1B-203ENST00000492361 MLH3Q9UHC1 1453 aa18.56■□□□□ 0.56
TNFRSF1B-203ENST00000492361 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ABCC4O15439 1325 aa18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SRGAP3O43295 1099 aa18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 PDE1AP54750 535 aa18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 TEFQ10587 303 aa18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1B-203ENST00000492361 CPA1P15085 419 aa18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SKOR2Q2VWA4 1001 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SIL1Q9H173 461 aa18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SNX21Q969T3 373 aa18.53■□□□□ 0.56
TNFRSF1B-203ENST00000492361 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1B-203ENST00000492361 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
TNFRSF1B-203ENST00000492361 CHL1O00533 1208 aa18.53■□□□□ 0.56
TNFRSF1B-203ENST00000492361 CCDC30Q5VVM6 783 aa18.53■□□□□ 0.56
TNFRSF1B-203ENST00000492361 CAMSAP1Q5T5Y3 1602 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 PRKCSHP14314 528 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 MX1P20591 662 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 NUCB2P80303 420 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 C9orf78Q9NZ63 289 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1B-203ENST00000492361 PSME1Q06323 249 aa18.52■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 TAF7Q15545 349 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 NRXN1Q9ULB1 1477 aa18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 FOSBP53539 338 aa18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
TNFRSF1B-203ENST00000492361 VWDEQ8N2E2 1590 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 UNC5CLQ8IV45 518 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 CIZ1Q9ULV3 898 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 LRRC7Q96NW7 1537 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 A0A0G2JS52 829 aa18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 CCT4P50991 539 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1B-203ENST00000492361 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
TNFRSF1B-203ENST00000492361 TMX3Q96JJ7 454 aa18.49■□□□□ 0.55
TNFRSF1B-203ENST00000492361 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
TNFRSF1B-203ENST00000492361 FIBPO43427 364 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PPFIA3O75145 1194 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PRIM1P49642 420 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 TCEANC2Q96MN5 208 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PTPRMP28827 1452 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 KCNQ3O43525 872 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PI4KAP2A4QPH2 592 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 GNAI3P08754 354 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PI4KAP1Q8N8J0 262 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 FRMPD1Q5SYB0 1578 aa18.48■□□□□ 0.55
TNFRSF1B-203ENST00000492361 VPS37CA5D8V6 355 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 R3HCC1Q9Y3T6 440 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ARAP3Q8WWN8 1544 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 LGR6Q9HBX8 967 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 ERBB4Q15303 1308 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
TNFRSF1B-203ENST00000492361 MYL6BP14649 208 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.55
TNFRSF1B-203ENST00000492361 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms