RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 PPP1R1BQ9UD71 204 aaPredicted RBP24.07■■□□□ 1.44
TCEA3-206ENST00000492271 NSD3Q9BZ95 1437 aa24.07■■□□□ 1.44
TCEA3-206ENST00000492271 INSRP06213 1382 aa24.06■■□□□ 1.44
TCEA3-206ENST00000492271 KIF24Q5T7B8 1368 aa24.06■■□□□ 1.44
TCEA3-206ENST00000492271 LRRC4BQ9NT99 713 aa24.06■■□□□ 1.44
TCEA3-206ENST00000492271 FLT4P35916 1363 aa24.05■■□□□ 1.44
TCEA3-206ENST00000492271 COL24A1Q17RW2 1714 aa24.05■■□□□ 1.44
TCEA3-206ENST00000492271 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
TCEA3-206ENST00000492271 ZNF827Q17R98 1081 aa24.04■■□□□ 1.44
TCEA3-206ENST00000492271 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
TCEA3-206ENST00000492271 MAP2P11137 1827 aaKnown RBP24.03■■□□□ 1.44
TCEA3-206ENST00000492271 ZCRB1Q8TBF4 217 aaKnown RBP24.03■■□□□ 1.44
TCEA3-206ENST00000492271 SGIP1Q9BQI5 828 aa24.03■■□□□ 1.44
TCEA3-206ENST00000492271 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
TCEA3-206ENST00000492271 USHBP1Q8N6Y0 703 aa24.02■■□□□ 1.44
TCEA3-206ENST00000492271 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
TCEA3-206ENST00000492271 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
TCEA3-206ENST00000492271 MTFR1LQ9H019 292 aa24■■□□□ 1.43
TCEA3-206ENST00000492271 ATF5Q9Y2D1 282 aaPredicted RBP24■■□□□ 1.43
TCEA3-206ENST00000492271 CGNL1Q0VF96 1302 aa24■■□□□ 1.43
TCEA3-206ENST00000492271 PRIM1P49642 420 aaKnown RBP23.99■■□□□ 1.43
TCEA3-206ENST00000492271 SLC27A3Q5K4L6 730 aa23.99■■□□□ 1.43
TCEA3-206ENST00000492271 AKT1S1Q96B36 256 aa23.99■■□□□ 1.43
TCEA3-206ENST00000492271 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
TCEA3-206ENST00000492271 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
TCEA3-206ENST00000492271 ITGB4P16144 1822 aa23.98■■□□□ 1.43
TCEA3-206ENST00000492271 UTRNP46939 3433 aa23.97■■□□□ 1.43
TCEA3-206ENST00000492271 SYTL4Q96C24 671 aaPredicted RBP23.96■■□□□ 1.43
TCEA3-206ENST00000492271 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
TCEA3-206ENST00000492271 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.42
TCEA3-206ENST00000492271 C5P01031 1676 aa23.95■■□□□ 1.42
TCEA3-206ENST00000492271 KCNQ4P56696 695 aa23.93■■□□□ 1.42
TCEA3-206ENST00000492271 PNPLA7Q6ZV29 1317 aa23.92■■□□□ 1.42
TCEA3-206ENST00000492271 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
TCEA3-206ENST00000492271 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
TCEA3-206ENST00000492271 TATP17735 454 aaPredicted RBP23.92■■□□□ 1.42
TCEA3-206ENST00000492271 FHDC1Q9C0D6 1143 aaPredicted RBP23.92■■□□□ 1.42
TCEA3-206ENST00000492271 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
TCEA3-206ENST00000492271 SYT17Q9BSW7 474 aa23.9■■□□□ 1.42
TCEA3-206ENST00000492271 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.42
TCEA3-206ENST00000492271 CYP27B1O15528 508 aa23.89■■□□□ 1.41
TCEA3-206ENST00000492271 YY1P25490 414 aa23.87■■□□□ 1.41
TCEA3-206ENST00000492271 POLKQ9UBT6 870 aa23.87■■□□□ 1.41
TCEA3-206ENST00000492271 SLC16A10Q8TF71 515 aa23.86■■□□□ 1.41
TCEA3-206ENST00000492271 ARXQ96QS3 562 aa23.86■■□□□ 1.41
TCEA3-206ENST00000492271 CCNL1Q9UK58 526 aaPredicted RBP23.86■■□□□ 1.41
TCEA3-206ENST00000492271 CHD4Q14839 1912 aa23.85■■□□□ 1.41
TCEA3-206ENST00000492271 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
TCEA3-206ENST00000492271 PPM1GO15355 546 aaPredicted RBP23.84■■□□□ 1.41
TCEA3-206ENST00000492271 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
TCEA3-206ENST00000492271 DCAF8L1A6NGE4 600 aa23.83■■□□□ 1.41
TCEA3-206ENST00000492271 EYA1Q99502 592 aa23.83■■□□□ 1.41
TCEA3-206ENST00000492271 TFCP2L1Q9NZI6 479 aa23.83■■□□□ 1.41
TCEA3-206ENST00000492271 C4BP0C0L5 1744 aa23.82■■□□□ 1.4
TCEA3-206ENST00000492271 PALLDQ8WX93 1383 aa23.82■■□□□ 1.4
TCEA3-206ENST00000492271 UBR3Q6ZT12 1888 aa23.81■■□□□ 1.4
TCEA3-206ENST00000492271 NKX1-1Q15270 411 aaPredicted RBP23.81■■□□□ 1.4
TCEA3-206ENST00000492271 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
TCEA3-206ENST00000492271 GOLGB1Q14789 3259 aaKnown RBP23.8■■□□□ 1.4
TCEA3-206ENST00000492271 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
TCEA3-206ENST00000492271 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
TCEA3-206ENST00000492271 MPRIPQ6WCQ1 1025 aa23.78■■□□□ 1.4
TCEA3-206ENST00000492271 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
TCEA3-206ENST00000492271 PANK3Q9H999 370 aa23.78■■□□□ 1.4
TCEA3-206ENST00000492271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.78■■□□□ 1.43e-9■□□□□ 10.7
TCEA3-206ENST00000492271 COL23A1Q86Y22 540 aaPredicted RBP23.77■■□□□ 1.4
TCEA3-206ENST00000492271 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
TCEA3-206ENST00000492271 SPG7Q9UQ90 795 aa23.76■■□□□ 1.39
TCEA3-206ENST00000492271 PIGBQ92521 554 aa23.75■■□□□ 1.39
TCEA3-206ENST00000492271 IGSF1Q8N6C5 1336 aa23.75■■□□□ 1.39
TCEA3-206ENST00000492271 POLD1P28340 1107 aa23.74■■□□□ 1.39
TCEA3-206ENST00000492271 PHKG2P15735 406 aa23.72■■□□□ 1.39
TCEA3-206ENST00000492271 SMARCC1Q92922 1105 aaPredicted RBP23.72■■□□□ 1.39
TCEA3-206ENST00000492271 AMIGO3Q86WK7 504 aa23.71■■□□□ 1.39
TCEA3-206ENST00000492271 ZNF831Q5JPB2 1677 aa23.7■■□□□ 1.39
TCEA3-206ENST00000492271 IFNL2Q8IZJ0 200 aa23.69■■□□□ 1.38
TCEA3-206ENST00000492271 NLGN2Q8NFZ4 835 aa23.68■■□□□ 1.38
TCEA3-206ENST00000492271 MSL1Q68DK7 614 aa23.67■■□□□ 1.38
TCEA3-206ENST00000492271 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
TCEA3-206ENST00000492271 LOC102724428A0A0B4J2F2 783 aa23.66■■□□□ 1.38
TCEA3-206ENST00000492271 MSH5O43196 834 aa23.66■■□□□ 1.38
TCEA3-206ENST00000492271 HMGB2P26583 209 aaKnown RBP23.66■■□□□ 1.38
TCEA3-206ENST00000492271 SIK1P57059 783 aa23.66■■□□□ 1.38
TCEA3-206ENST00000492271 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
TCEA3-206ENST00000492271 TMOD3Q9NYL9 352 aa23.66■■□□□ 1.38
TCEA3-206ENST00000492271 KDRP35968 1356 aa23.65■■□□□ 1.38
TCEA3-206ENST00000492271 LINC00116Q8NCU8 138 aa23.65■■□□□ 1.38
TCEA3-206ENST00000492271 FLAD1Q8NFF5 587 aa23.65■■□□□ 1.38
TCEA3-206ENST00000492271 ASAP1Q9ULH1 1129 aa23.65■■□□□ 1.38
TCEA3-206ENST00000492271 KDM6AO15550 1401 aaPredicted RBP23.65■■□□□ 1.38
TCEA3-206ENST00000492271 ZNF784Q8NCA9 323 aaPredicted RBP23.64■■□□□ 1.37
TCEA3-206ENST00000492271 ITPK1Q13572 414 aa23.63■■□□□ 1.37
TCEA3-206ENST00000492271 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
TCEA3-206ENST00000492271 AK7Q96M32 723 aa23.63■■□□□ 1.37
TCEA3-206ENST00000492271 KIF7Q2M1P5 1343 aa23.62■■□□□ 1.37
TCEA3-206ENST00000492271 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
TCEA3-206ENST00000492271 SMIM5Q71RC9 77 aa23.62■■□□□ 1.37
TCEA3-206ENST00000492271 ATG3Q9NT62 314 aa23.62■■□□□ 1.37
TCEA3-206ENST00000492271 SCN11AQ9UI33 1791 aa23.62■■□□□ 1.37
TCEA3-206ENST00000492271 GPR162Q16538 588 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms