RNA–Protein interactions for RNA: ENST00000492244.5

FDPS-217, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-217ENST00000492244 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
FDPS-217ENST00000492244 ZNF827Q17R98 1081 aa16.48■□□□□ 0.23
FDPS-217ENST00000492244 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
FDPS-217ENST00000492244 TFCP2L1Q9NZI6 479 aa16.48■□□□□ 0.23
FDPS-217ENST00000492244 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
FDPS-217ENST00000492244 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
FDPS-217ENST00000492244 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
FDPS-217ENST00000492244 LY75O60449 1722 aa16.46■□□□□ 0.23
FDPS-217ENST00000492244 USP47Q96K76 1375 aa16.46■□□□□ 0.23
FDPS-217ENST00000492244 MEGF6O75095 1541 aa16.45■□□□□ 0.22
FDPS-217ENST00000492244 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
FDPS-217ENST00000492244 GPR162Q16538 588 aa16.45■□□□□ 0.22
FDPS-217ENST00000492244 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
FDPS-217ENST00000492244 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
FDPS-217ENST00000492244 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
FDPS-217ENST00000492244 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
FDPS-217ENST00000492244 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
FDPS-217ENST00000492244 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
FDPS-217ENST00000492244 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
FDPS-217ENST00000492244 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
FDPS-217ENST00000492244 FLT4P35916 1363 aa16.43■□□□□ 0.22
FDPS-217ENST00000492244 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
FDPS-217ENST00000492244 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
FDPS-217ENST00000492244 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
FDPS-217ENST00000492244 NSD2O96028 1365 aa16.42■□□□□ 0.22
FDPS-217ENST00000492244 INSRP06213 1382 aa16.42■□□□□ 0.22
FDPS-217ENST00000492244 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
FDPS-217ENST00000492244 RRS1Q15050 365 aaKnown RBP16.41■□□□□ 0.22
FDPS-217ENST00000492244 GGNBP2Q9H3C7 697 aa16.41■□□□□ 0.22
FDPS-217ENST00000492244 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
FDPS-217ENST00000492244 FYB1O15117 783 aa16.4■□□□□ 0.22
FDPS-217ENST00000492244 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
FDPS-217ENST00000492244 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
FDPS-217ENST00000492244 MSH5O43196 834 aa16.39■□□□□ 0.21
FDPS-217ENST00000492244 NBPF6Q5VWK0 638 aa16.39■□□□□ 0.21
FDPS-217ENST00000492244 NBPF4Q96M43 638 aa16.39■□□□□ 0.21
FDPS-217ENST00000492244 C5P01031 1676 aa16.39■□□□□ 0.21
FDPS-217ENST00000492244 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
FDPS-217ENST00000492244 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
FDPS-217ENST00000492244 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
FDPS-217ENST00000492244 FBLN1P23142 703 aa16.36■□□□□ 0.21
FDPS-217ENST00000492244 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
FDPS-217ENST00000492244 PALLDQ8WX93 1383 aa16.36■□□□□ 0.21
FDPS-217ENST00000492244 KCNQ4P56696 695 aa16.35■□□□□ 0.21
FDPS-217ENST00000492244 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
FDPS-217ENST00000492244 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
FDPS-217ENST00000492244 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
FDPS-217ENST00000492244 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.2
FDPS-217ENST00000492244 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
FDPS-217ENST00000492244 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.2
FDPS-217ENST00000492244 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
FDPS-217ENST00000492244 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
FDPS-217ENST00000492244 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
FDPS-217ENST00000492244 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
FDPS-217ENST00000492244 AK7Q96M32 723 aa16.32■□□□□ 0.2
FDPS-217ENST00000492244 PLEKHG2Q9H7P9 1386 aa16.31■□□□□ 0.2
FDPS-217ENST00000492244 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
FDPS-217ENST00000492244 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
FDPS-217ENST00000492244 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
FDPS-217ENST00000492244 NCAPD2Q15021 1401 aa16.3■□□□□ 0.2
FDPS-217ENST00000492244 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
FDPS-217ENST00000492244 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
FDPS-217ENST00000492244 ITGB4P16144 1822 aa16.3■□□□□ 0.2
FDPS-217ENST00000492244 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
FDPS-217ENST00000492244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.28e-12■■□□□ 11.6
FDPS-217ENST00000492244 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
FDPS-217ENST00000492244 CYP27B1O15528 508 aa16.28■□□□□ 0.2
FDPS-217ENST00000492244 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
FDPS-217ENST00000492244 EMILIN1Q9Y6C2 1016 aa16.28■□□□□ 0.2
FDPS-217ENST00000492244 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
FDPS-217ENST00000492244 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
FDPS-217ENST00000492244 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
FDPS-217ENST00000492244 SSFA2P28290 1259 aa16.26■□□□□ 0.19
FDPS-217ENST00000492244 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
FDPS-217ENST00000492244 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
FDPS-217ENST00000492244 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
FDPS-217ENST00000492244 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
FDPS-217ENST00000492244 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
FDPS-217ENST00000492244 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
FDPS-217ENST00000492244 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
FDPS-217ENST00000492244 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
FDPS-217ENST00000492244 SIK1P57059 783 aa16.23■□□□□ 0.19
FDPS-217ENST00000492244 PIGBQ92521 554 aa16.23■□□□□ 0.19
FDPS-217ENST00000492244 PHF14O94880 888 aa16.22■□□□□ 0.19
FDPS-217ENST00000492244 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
FDPS-217ENST00000492244 EYA1Q99502 592 aa16.21■□□□□ 0.19
FDPS-217ENST00000492244 ATP10DQ9P241 1426 aa16.2■□□□□ 0.18
FDPS-217ENST00000492244 PHKG2P15735 406 aa16.2■□□□□ 0.18
FDPS-217ENST00000492244 GNPATO15228 680 aa16.19■□□□□ 0.18
FDPS-217ENST00000492244 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
FDPS-217ENST00000492244 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
FDPS-217ENST00000492244 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
FDPS-217ENST00000492244 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
FDPS-217ENST00000492244 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
FDPS-217ENST00000492244 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
FDPS-217ENST00000492244 CEP350Q5VT06 3117 aa16.18■□□□□ 0.18
FDPS-217ENST00000492244 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
FDPS-217ENST00000492244 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
FDPS-217ENST00000492244 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
FDPS-217ENST00000492244 ADRA2BP18089 450 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms