RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	NEFM	P07197	916 aa		12.9	□□□□□ -0.34
TRO-223	ENST00000492142	PLEKHF1	Q96S99	279 aa		12.9	□□□□□ -0.34
TRO-223	ENST00000492142	MAPK8IP3	Q9UPT6	1336 aa		12.89	□□□□□ -0.35
TRO-223	ENST00000492142	CRB1	P82279	1406 aa		12.89	□□□□□ -0.35
TRO-223	ENST00000492142	RAPGEF4	Q8WZA2	1011 aa		12.89	□□□□□ -0.35
TRO-223	ENST00000492142	RRP7A	Q9Y3A4	280 aa	Known RBP	12.89	□□□□□ -0.35
TRO-223	ENST00000492142	SALL2	Q9Y467	1007 aa	Predicted RBP	12.89	□□□□□ -0.35
TRO-223	ENST00000492142	KDR	P35968	1356 aa		12.89	□□□□□ -0.35
TRO-223	ENST00000492142	BCL9L	Q86UU0	1499 aa		12.89	□□□□□ -0.35
TRO-223	ENST00000492142	NWD2	Q9ULI1	1742 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	TAT	P17735	454 aa	Predicted RBP	12.88	□□□□□ -0.35
TRO-223	ENST00000492142	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
TRO-223	ENST00000492142	NEUROD2	Q15784	382 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	VPS72	Q15906	364 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	TCP11L2	Q8N4U5	519 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	NRAP	Q86VF7	1730 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	SPATA31A1	Q5TZJ5	1347 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	SPATA31A5	Q5VU36	1347 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	SPATA31A7	Q8IWB4	1347 aa		12.88	□□□□□ -0.35
TRO-223	ENST00000492142	FAM208A	Q9UK61	1670 aa	Known RBP	12.87	□□□□□ -0.35
TRO-223	ENST00000492142	QTRT2	Q9H974	415 aa	Known RBP	12.87	□□□□□ -0.35
TRO-223	ENST00000492142	IL2RB	P14784	551 aa		12.86	□□□□□ -0.35
TRO-223	ENST00000492142	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.86	□□□□□ -0.35
TRO-223	ENST00000492142	NCAPD2	Q15021	1401 aa		12.86	□□□□□ -0.35
TRO-223	ENST00000492142	TMPO	P42166	694 aa	Known RBP	12.85	□□□□□ -0.35
TRO-223	ENST00000492142	RIPK4	P57078	832 aa		12.85	□□□□□ -0.35
TRO-223	ENST00000492142	NFE2L2	Q16236	605 aa		12.85	□□□□□ -0.35
TRO-223	ENST00000492142	MTHFSD	Q2M296	383 aa	Known RBP	12.85	□□□□□ -0.35
TRO-223	ENST00000492142	TRPC5	Q9UL62	973 aa	Predicted RBP	12.85	□□□□□ -0.35
TRO-223	ENST00000492142	FAM98C	Q17RN3	349 aa	Known RBP	12.84	□□□□□ -0.35
TRO-223	ENST00000492142	ZNF772	Q68DY9	489 aa	Predicted RBP	12.84	□□□□□ -0.35
TRO-223	ENST00000492142	MEGF6	O75095	1541 aa		12.83	□□□□□ -0.35
TRO-223	ENST00000492142	AMOT	Q4VCS5	1084 aa		12.83	□□□□□ -0.36
TRO-223	ENST00000492142	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.83	□□□□□ -0.36
TRO-223	ENST00000492142	GAS2L2	Q8NHY3	880 aa		12.83	□□□□□ -0.36
TRO-223	ENST00000492142	ZCRB1	Q8TBF4	217 aa	Known RBP	12.83	□□□□□ -0.36
TRO-223	ENST00000492142	GJD4	Q96KN9	370 aa	Predicted RBP	12.83	□□□□□ -0.36
TRO-223	ENST00000492142	SPG7	Q9UQ90	795 aa		12.83	□□□□□ -0.36
TRO-223	ENST00000492142	THRAP3	Q9Y2W1	955 aa	Known RBP	12.83	□□□□□ -0.36
TRO-223	ENST00000492142	ATRN	O75882	1429 aa		12.82	□□□□□ -0.36
TRO-223	ENST00000492142	BARGIN	Q6ZT62	677 aa		12.82	□□□□□ -0.36
TRO-223	ENST00000492142	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.82	□□□□□ -0.36
TRO-223	ENST00000492142		A0A0G2JS52	829 aa		12.81	□□□□□ -0.36
TRO-223	ENST00000492142	EXOC5	O00471	708 aa		12.81	□□□□□ -0.36
TRO-223	ENST00000492142	MYT1	Q01538	1121 aa		12.81	□□□□□ -0.36
TRO-223	ENST00000492142	DDX54	Q8TDD1	881 aa	Known RBP	12.81	□□□□□ -0.36
TRO-223	ENST00000492142	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.81	□□□□□ -0.36
TRO-223	ENST00000492142	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	2e-6	■■■■□ 22.9
TRO-223	ENST00000492142	C1orf141	Q5JVX7	400 aa		12.8	□□□□□ -0.36
TRO-223	ENST00000492142	RGS17	Q9UGC6	210 aa	Predicted RBP	12.8	□□□□□ -0.36
TRO-223	ENST00000492142	TRIM35	Q9UPQ4	493 aa		12.8	□□□□□ -0.36
TRO-223	ENST00000492142	OVOS2	A0A0G2JMS6	1433 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	DISP2	A7MBM2	1401 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	GNAT3	A8MTJ3	354 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	CYP27B1	O15528	508 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	POLA2	Q14181	598 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	DCTN1	Q14203	1278 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	DDB1	Q16531	1140 aa		12.79	□□□□□ -0.36
TRO-223	ENST00000492142	RTF1	Q92541	710 aa	Known RBP	12.79	□□□□□ -0.36
TRO-223	ENST00000492142	PHKG2	P15735	406 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	LMOD3	Q0VAK6	560 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	AKAP4	Q5JQC9	854 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	MPRIP	Q6WCQ1	1025 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	MCM10	Q7L590	875 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	WWC1	Q8IX03	1113 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	IFNL2	Q8IZJ0	200 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	NGEF	Q8N5V2	710 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	THUMPD2	Q9BTF0	503 aa	Known RBP	12.78	□□□□□ -0.36
TRO-223	ENST00000492142	PARP4	Q9UKK3	1724 aa	Known RBP	12.78	□□□□□ -0.36
TRO-223	ENST00000492142	DLG5	Q8TDM6	1919 aa		12.78	□□□□□ -0.36
TRO-223	ENST00000492142	GLI3	P10071	1580 aa		12.77	□□□□□ -0.36
TRO-223	ENST00000492142	RBM6	P78332	1123 aa	Known RBP	12.77	□□□□□ -0.37
TRO-223	ENST00000492142	CCDC27	Q2M243	656 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	POTEA	Q6S8J7	498 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	LGR6	Q9HBX8	967 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	ZBED9	Q6R2W3	1325 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	PCDH11X	Q9BZA7	1347 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	PCDH11Y	Q9BZA8	1340 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	MAP3K5	Q99683	1374 aa		12.77	□□□□□ -0.37
TRO-223	ENST00000492142	HTATSF1	O43719	755 aa	Known RBP	12.76	□□□□□ -0.37
TRO-223	ENST00000492142	ONECUT3	O60422	494 aa	Predicted RBP	12.76	□□□□□ -0.37
TRO-223	ENST00000492142	RXRB	P28702	533 aa		12.76	□□□□□ -0.37
TRO-223	ENST00000492142	SEPT12	Q8IYM1	358 aa		12.76	□□□□□ -0.37
TRO-223	ENST00000492142	IL17RE	Q8NFR9	667 aa		12.76	□□□□□ -0.37
TRO-223	ENST00000492142	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.76	□□□□□ -0.37
TRO-223	ENST00000492142	RNMT	O43148	476 aa	Known RBP	12.75	□□□□□ -0.37
TRO-223	ENST00000492142	PDE3B	Q13370	1112 aa		12.75	□□□□□ -0.37
TRO-223	ENST00000492142	PKD1L3	Q7Z443	1732 aa		12.75	□□□□□ -0.37
TRO-223	ENST00000492142	MARCH10	Q8NA82	808 aa	Predicted RBP	12.75	□□□□□ -0.37
TRO-223	ENST00000492142	WNK3	Q9BYP7	1800 aa		12.75	□□□□□ -0.37
TRO-223	ENST00000492142	PLEKHG2	Q9H7P9	1386 aa		12.75	□□□□□ -0.37
TRO-223	ENST00000492142	KAT6B	Q8WYB5	2073 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	ZNF521	Q96K83	1311 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	HSP90AB1	P08238	724 aa	Known RBP	12.74	□□□□□ -0.37
TRO-223	ENST00000492142	ATXN8OS	P0DMR3	200 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	GOLGA2	Q08379	1002 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	WDR63	Q8IWG1	891 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	CDCA7L	Q96GN5	454 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	DCAF5	Q96JK2	942 aa		12.74	□□□□□ -0.37
TRO-223	ENST00000492142	LAS1L	Q9Y4W2	734 aa	Known RBP	12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms