RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 TMCO3Q6UWJ1 677 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 CCDC192P0DO97 292 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 MICALL1Q8N3F8 863 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 TNNT1P13805 278 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 CCDC178Q5BJE1 867 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 NGLY1Q96IV0 654 aa7.97□□□□□ -1.13
UBP1-212ENST00000492136 ZWINTO95229 277 aa7.96□□□□□ -1.13
UBP1-212ENST00000492136 CCDC148Q8NFR7 591 aa7.96□□□□□ -1.13
UBP1-212ENST00000492136 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.13
UBP1-212ENST00000492136 CCDC85AQ96PX6 553 aaPredicted RBP7.96□□□□□ -1.13
UBP1-212ENST00000492136 API5Q9BZZ5 524 aaKnown RBP7.96□□□□□ -1.13
UBP1-212ENST00000492136 SIL1Q9H173 461 aa7.96□□□□□ -1.13
UBP1-212ENST00000492136 DNA2P51530 1060 aa7.96□□□□□ -1.13
UBP1-212ENST00000492136 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.13
UBP1-212ENST00000492136 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
UBP1-212ENST00000492136 BANK1Q8NDB2 785 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 ZBED9Q6R2W3 1325 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 OTUD6BQ8N6M0 293 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 GJA3Q9Y6H8 435 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 TXLNBQ8N3L3 684 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 PPM1EQ8WY54 764 aa7.96□□□□□ -1.14
UBP1-212ENST00000492136 POLR3GO15318 223 aaPredicted RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 SMC1AQ14683 1233 aaKnown RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 CTNNBL1Q8WYA6 563 aaPredicted RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 TMOD2Q9NZR1 351 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 RAI14Q9P0K7 980 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 FNDC3AQ9Y2H6 1198 aaKnown RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 SHTN1A0MZ66 631 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 ZBTB24O43167 697 aaPredicted RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 CBFA2T2O43439 604 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 WAPLQ7Z5K2 1190 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 PIP4K2AP48426 406 aaPredicted RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 ZNF397Q8NF99 534 aaPredicted RBP7.95□□□□□ -1.14
UBP1-212ENST00000492136 CARMIL1Q5VZK9 1371 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 CEP57L1Q8IYX8 460 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
UBP1-212ENST00000492136 CCDC144AA2RUR9 1427 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 EIF5P55010 431 aaKnown RBP7.94□□□□□ -1.14
UBP1-212ENST00000492136 LPXNO60711 386 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 CRACR2BQ8N4Y2 399 aaPredicted RBP7.94□□□□□ -1.14
UBP1-212ENST00000492136 TAF4BQ92750 862 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 FMN1Q68DA7 1419 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 SURF6O75683 361 aaKnown RBP7.94□□□□□ -1.14
UBP1-212ENST00000492136 IFFO1Q0D2I5 559 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 CDCA7Q9BWT1 371 aaPredicted RBP7.94□□□□□ -1.14
UBP1-212ENST00000492136 CAMK4Q16566 473 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 CRACR2AQ9BSW2 395 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 KMT5BQ4FZB7 885 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 PPP4R3AQ6IN85 833 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 MBD3O95983 291 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 UACAQ9BZF9 1416 aa7.94□□□□□ -1.14
UBP1-212ENST00000492136 RAPGEF4Q8WZA2 1011 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 CCDC158Q5M9N0 1113 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 PDCP20941 246 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 PRKG1Q13976 671 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 SPATA17Q96L03 361 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 CARMIL2Q6F5E8 1435 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 TERF1P54274 439 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 FKBP4Q02790 459 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBP1-212ENST00000492136 DDX11Q96FC9 970 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBP1-212ENST00000492136 GRPEL1Q9HAV7 217 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 GSTTP1A0A1W2PQM5 241 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 FILIP1Q7Z7B0 1213 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 USP47Q96K76 1375 aa7.93□□□□□ -1.14
UBP1-212ENST00000492136 HIP1O00291 1037 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 ZNF652Q9Y2D9 606 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 TRIM22Q8IYM9 498 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 JMYQ8N9B5 988 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 MYL6BP14649 208 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 PDCL2Q8N4E4 241 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.92□□□□□ -1.144e-6■□□□□ 11.1
UBP1-212ENST00000492136 DHX8Q14562 1220 aaKnown RBP7.92□□□□□ -1.14
UBP1-212ENST00000492136 EIF4E1BA6NMX2 242 aaKnown RBP7.92□□□□□ -1.14
UBP1-212ENST00000492136 CYP46A1Q9Y6A2 500 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 CCDC175P0C221 793 aa7.92□□□□□ -1.14
UBP1-212ENST00000492136 MACROD2A1Z1Q3 448 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 POTEJP0CG39 1038 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 APBB1IPQ7Z5R6 666 aaPredicted RBP7.91□□□□□ -1.14
UBP1-212ENST00000492136 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 PPFIA1Q13136 1202 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 LARP1BQ659C4 914 aaKnown RBP7.91□□□□□ -1.14
UBP1-212ENST00000492136 SPATA24Q86W54 205 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 PROSER2Q86WR7 435 aaPredicted RBP7.91□□□□□ -1.14
UBP1-212ENST00000492136 FEZ1Q99689 392 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 UBA5Q9GZZ9 404 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 CCDC160A6NGH7 325 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 KLHL10Q6JEL2 608 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
UBP1-212ENST00000492136 NOD1Q9Y239 953 aa7.91□□□□□ -1.14
UBP1-212ENST00000492136 GCOM1H8Y6P7 765 aaPredicted RBP7.91□□□□□ -1.14
UBP1-212ENST00000492136 ZPR1O75312 459 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms