RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
ATF3-209ENST00000492118 MTHFSDQ2M296 383 aaKnown RBP14.13□□□□□ -0.15
ATF3-209ENST00000492118 PNNQ9H307 717 aaKnown RBP14.13□□□□□ -0.15
ATF3-209ENST00000492118 LMO7Q8WWI1 1683 aa14.13□□□□□ -0.15
ATF3-209ENST00000492118 BRD2P25440 801 aaKnown RBP14.12□□□□□ -0.15
ATF3-209ENST00000492118 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
ATF3-209ENST00000492118 SPATA31A6Q5VVP1 1343 aa14.12□□□□□ -0.15
ATF3-209ENST00000492118 ZBED9Q6R2W3 1325 aa14.12□□□□□ -0.15
ATF3-209ENST00000492118 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
ATF3-209ENST00000492118 MCM10Q7L590 875 aa14.11□□□□□ -0.15
ATF3-209ENST00000492118 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
ATF3-209ENST00000492118 COL14A1Q05707 1796 aaKnown RBP14.11□□□□□ -0.15
ATF3-209ENST00000492118 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
ATF3-209ENST00000492118 WWC1Q8IX03 1113 aa14.11□□□□□ -0.15
ATF3-209ENST00000492118 KDRP35968 1356 aa14.1□□□□□ -0.15
ATF3-209ENST00000492118 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
ATF3-209ENST00000492118 A0A0G2JS52 829 aa14.1□□□□□ -0.15
ATF3-209ENST00000492118 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
ATF3-209ENST00000492118 USP21Q9UK80 565 aa14.1□□□□□ -0.15
ATF3-209ENST00000492118 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
ATF3-209ENST00000492118 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
ATF3-209ENST00000492118 TATP17735 454 aaPredicted RBP14.09□□□□□ -0.15
ATF3-209ENST00000492118 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
ATF3-209ENST00000492118 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
ATF3-209ENST00000492118 MEGF6O75095 1541 aa14.09□□□□□ -0.15
ATF3-209ENST00000492118 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
ATF3-209ENST00000492118 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
ATF3-209ENST00000492118 AFF2P51816 1311 aa14.08□□□□□ -0.16
ATF3-209ENST00000492118 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
ATF3-209ENST00000492118 CRB1P82279 1406 aa14.08□□□□□ -0.16
ATF3-209ENST00000492118 UNC5CLQ8IV45 518 aa14.08□□□□□ -0.16
ATF3-209ENST00000492118 KAT6BQ8WYB5 2073 aa14.07□□□□□ -0.16
ATF3-209ENST00000492118 DLG5Q8TDM6 1919 aa14.07□□□□□ -0.16
ATF3-209ENST00000492118 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
ATF3-209ENST00000492118 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
ATF3-209ENST00000492118 IL2RBP14784 551 aa14.06□□□□□ -0.16
ATF3-209ENST00000492118 FAM98CQ17RN3 349 aaKnown RBP14.06□□□□□ -0.16
ATF3-209ENST00000492118 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
ATF3-209ENST00000492118 MIS18AQ9NYP9 233 aa14.06□□□□□ -0.16
ATF3-209ENST00000492118 FAM208AQ9UK61 1670 aaKnown RBP14.05□□□□□ -0.16
ATF3-209ENST00000492118 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
ATF3-209ENST00000492118 SLIT2O94813 1529 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 BCL9LQ86UU0 1499 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 LGR6Q9HBX8 967 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 ABCC6O95255 1503 aa14.05□□□□□ -0.16
ATF3-209ENST00000492118 EP400Q96L91 3159 aa14.04□□□□□ -0.16
ATF3-209ENST00000492118 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
ATF3-209ENST00000492118 SPATA31A1Q5TZJ5 1347 aa14.04□□□□□ -0.16
ATF3-209ENST00000492118 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
ATF3-209ENST00000492118 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
ATF3-209ENST00000492118 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
ATF3-209ENST00000492118 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
ATF3-209ENST00000492118 SPATA31A5Q5VU36 1347 aa14.02□□□□□ -0.16
ATF3-209ENST00000492118 SPATA31A7Q8IWB4 1347 aa14.02□□□□□ -0.16
ATF3-209ENST00000492118 CYP27B1O15528 508 aa14.02□□□□□ -0.16
ATF3-209ENST00000492118 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.16
ATF3-209ENST00000492118 NRAPQ86VF7 1730 aa14.02□□□□□ -0.17
ATF3-209ENST00000492118 IL17REQ8NFR9 667 aa14.02□□□□□ -0.17
ATF3-209ENST00000492118 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.17
ATF3-209ENST00000492118 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
ATF3-209ENST00000492118 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
ATF3-209ENST00000492118 FAM182BQ5T319 152 aa14□□□□□ -0.17
ATF3-209ENST00000492118 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
ATF3-209ENST00000492118 SLFN5Q08AF3 891 aa14□□□□□ -0.17
ATF3-209ENST00000492118 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
ATF3-209ENST00000492118 VPS72Q15906 364 aa14□□□□□ -0.17
ATF3-209ENST00000492118 AKAP4Q5JQC9 854 aa14□□□□□ -0.17
ATF3-209ENST00000492118 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
ATF3-209ENST00000492118 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
ATF3-209ENST00000492118 PHKG2P15735 406 aa13.99□□□□□ -0.17
ATF3-209ENST00000492118 CCDC27Q2M243 656 aa13.99□□□□□ -0.17
ATF3-209ENST00000492118 OVOS2A0A0G2JMS6 1433 aa13.99□□□□□ -0.17
ATF3-209ENST00000492118 EXOC5O00471 708 aa13.99□□□□□ -0.17
ATF3-209ENST00000492118 DDB1Q16531 1140 aa13.98□□□□□ -0.17
ATF3-209ENST00000492118 DUSP27Q5VZP5 1158 aa13.98□□□□□ -0.17
ATF3-209ENST00000492118 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
ATF3-209ENST00000492118 IFNL2Q8IZJ0 200 aa13.98□□□□□ -0.17
ATF3-209ENST00000492118 GJD4Q96KN9 370 aaPredicted RBP13.98□□□□□ -0.17
ATF3-209ENST00000492118 E9PSI1 815 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
ATF3-209ENST00000492118 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
ATF3-209ENST00000492118 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
ATF3-209ENST00000492118 TEFQ10587 303 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 KRT24Q2M2I5 525 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
ATF3-209ENST00000492118 FANCIQ9NVI1 1328 aa13.97□□□□□ -0.17
ATF3-209ENST00000492118 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
ATF3-209ENST00000492118 DHX37Q8IY37 1157 aaKnown RBP13.96□□□□□ -0.17
ATF3-209ENST00000492118 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
ATF3-209ENST00000492118 NFATC2IPQ8NCF5 419 aa13.96□□□□□ -0.17
ATF3-209ENST00000492118 PARP4Q9UKK3 1724 aaKnown RBP13.96□□□□□ -0.17
ATF3-209ENST00000492118 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
ATF3-209ENST00000492118 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms