RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.03■■□□□ 1.12
SNHG28-202ENST00000491974 ADAMTS8Q9UP79 889 aa22.03■■□□□ 1.12
SNHG28-202ENST00000491974 MEGF6O75095 1541 aa22.02■■□□□ 1.12
SNHG28-202ENST00000491974 PRKAR2BP31323 418 aa22.02■■□□□ 1.12
SNHG28-202ENST00000491974 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.12
SNHG28-202ENST00000491974 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
SNHG28-202ENST00000491974 OVOS2A0A0G2JMS6 1433 aa22.02■■□□□ 1.12
SNHG28-202ENST00000491974 RGPD1P0DJD0 1748 aa22.01■■□□□ 1.11
SNHG28-202ENST00000491974 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
SNHG28-202ENST00000491974 AMOTQ4VCS5 1084 aa22.01■■□□□ 1.11
SNHG28-202ENST00000491974 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
SNHG28-202ENST00000491974 RGS12O14924 1447 aa22■■□□□ 1.11
SNHG28-202ENST00000491974 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
SNHG28-202ENST00000491974 NEFMP07197 916 aa21.98■■□□□ 1.11
SNHG28-202ENST00000491974 KRT27Q7Z3Y8 459 aa21.98■■□□□ 1.11
SNHG28-202ENST00000491974 DDX54Q8TDD1 881 aaKnown RBP21.98■■□□□ 1.11
SNHG28-202ENST00000491974 PHACTR3Q96KR7 559 aa21.97■■□□□ 1.11
SNHG28-202ENST00000491974 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
SNHG28-202ENST00000491974 THSD7AQ9UPZ6 1657 aa21.96■■□□□ 1.11
SNHG28-202ENST00000491974 TNS2Q63HR2 1409 aa21.96■■□□□ 1.11
SNHG28-202ENST00000491974 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
SNHG28-202ENST00000491974 MARCH10Q8NA82 808 aaPredicted RBP21.95■■□□□ 1.1
SNHG28-202ENST00000491974 PCDH11XQ9BZA7 1347 aa21.95■■□□□ 1.1
SNHG28-202ENST00000491974 PCDH11YQ9BZA8 1340 aa21.95■■□□□ 1.1
SNHG28-202ENST00000491974 CYP27B1O15528 508 aa21.94■■□□□ 1.1
SNHG28-202ENST00000491974 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
SNHG28-202ENST00000491974 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
SNHG28-202ENST00000491974 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
SNHG28-202ENST00000491974 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
SNHG28-202ENST00000491974 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
SNHG28-202ENST00000491974 CCDC146Q8IYE0 955 aa21.93■■□□□ 1.1
SNHG28-202ENST00000491974 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
SNHG28-202ENST00000491974 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
SNHG28-202ENST00000491974 PHKG2P15735 406 aa21.91■■□□□ 1.1
SNHG28-202ENST00000491974 ILDR2Q71H61 639 aa21.91■■□□□ 1.1
SNHG28-202ENST00000491974 PARP4Q9UKK3 1724 aaKnown RBP21.91■■□□□ 1.1
SNHG28-202ENST00000491974 SOCS7O14512 581 aa21.9■■□□□ 1.1
SNHG28-202ENST00000491974 AKAP4Q5JQC9 854 aa21.9■■□□□ 1.1
SNHG28-202ENST00000491974 FAM182BQ5T319 152 aa21.9■■□□□ 1.1
SNHG28-202ENST00000491974 HSP90AB1P08238 724 aaKnown RBP21.89■■□□□ 1.09
SNHG28-202ENST00000491974 NKX1-1Q15270 411 aaPredicted RBP21.89■■□□□ 1.09
SNHG28-202ENST00000491974 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
SNHG28-202ENST00000491974 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
SNHG28-202ENST00000491974 NFE2L2Q16236 605 aa21.88■■□□□ 1.09
SNHG28-202ENST00000491974 WNK3Q9BYP7 1800 aa21.87■■□□□ 1.09
SNHG28-202ENST00000491974 GNAT3A8MTJ3 354 aa21.86■■□□□ 1.09
SNHG28-202ENST00000491974 TMPOP42166 694 aaKnown RBP21.85■■□□□ 1.09
SNHG28-202ENST00000491974 DCAF5Q96JK2 942 aa21.85■■□□□ 1.09
SNHG28-202ENST00000491974 BCL9O00512 1426 aa21.84■■□□□ 1.09
SNHG28-202ENST00000491974 APAF1O14727 1248 aa21.84■■□□□ 1.09
SNHG28-202ENST00000491974 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
SNHG28-202ENST00000491974 HTATSF1O43719 755 aaKnown RBP21.83■■□□□ 1.09
SNHG28-202ENST00000491974 RIPK4P57078 832 aa21.83■■□□□ 1.09
SNHG28-202ENST00000491974 MAP3K5Q99683 1374 aa21.83■■□□□ 1.08
SNHG28-202ENST00000491974 PKD1L3Q7Z443 1732 aa21.83■■□□□ 1.08
SNHG28-202ENST00000491974 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
SNHG28-202ENST00000491974 RRP7AQ9Y3A4 280 aaKnown RBP21.82■■□□□ 1.08
SNHG28-202ENST00000491974 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
SNHG28-202ENST00000491974 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
SNHG28-202ENST00000491974 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
SNHG28-202ENST00000491974 ACSBG1Q96GR2 724 aa21.8■■□□□ 1.08
SNHG28-202ENST00000491974 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
SNHG28-202ENST00000491974 ERVV-2B6SEH9 535 aa21.79■■□□□ 1.08
SNHG28-202ENST00000491974 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
SNHG28-202ENST00000491974 LMOD3Q0VAK6 560 aa21.79■■□□□ 1.08
SNHG28-202ENST00000491974 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
SNHG28-202ENST00000491974 KCNQ2O43526 872 aa21.77■■□□□ 1.08
SNHG28-202ENST00000491974 TRIM37O94972 964 aa21.77■■□□□ 1.08
SNHG28-202ENST00000491974 MCM10Q7L590 875 aa21.77■■□□□ 1.08
SNHG28-202ENST00000491974 SYTL4Q96C24 671 aaPredicted RBP21.77■■□□□ 1.08
SNHG28-202ENST00000491974 BCL11BQ9C0K0 894 aaPredicted RBP21.77■■□□□ 1.08
SNHG28-202ENST00000491974 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
SNHG28-202ENST00000491974 CABP4P57796 275 aa21.76■■□□□ 1.07
SNHG28-202ENST00000491974 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
SNHG28-202ENST00000491974 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
SNHG28-202ENST00000491974 SHANK3Q9BYB0 1731 aa21.76■■□□□ 1.07
SNHG28-202ENST00000491974 TMOD3Q9NYL9 352 aa21.75■■□□□ 1.07
SNHG28-202ENST00000491974 TRIM35Q9UPQ4 493 aa21.75■■□□□ 1.07
SNHG28-202ENST00000491974 SENP3-EIF4A1A0A087X0R7 540 aa21.74■■□□□ 1.07
SNHG28-202ENST00000491974 TEFQ10587 303 aa21.74■■□□□ 1.07
SNHG28-202ENST00000491974 NGEFQ8N5V2 710 aa21.74■■□□□ 1.07
SNHG28-202ENST00000491974 NFATC2IPQ8NCF5 419 aa21.74■■□□□ 1.07
SNHG28-202ENST00000491974 SLC52A2Q9HAB3 445 aa21.74■■□□□ 1.07
SNHG28-202ENST00000491974 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
SNHG28-202ENST00000491974 PIGBQ92521 554 aa21.73■■□□□ 1.07
SNHG28-202ENST00000491974 CEMIPQ8WUJ3 1361 aa21.73■■□□□ 1.07
SNHG28-202ENST00000491974 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
SNHG28-202ENST00000491974 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
SNHG28-202ENST00000491974 THUMPD2Q9BTF0 503 aaKnown RBP21.72■■□□□ 1.07
SNHG28-202ENST00000491974 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
SNHG28-202ENST00000491974 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
SNHG28-202ENST00000491974 TAF7Q15545 349 aaPredicted RBP21.69■■□□□ 1.06
SNHG28-202ENST00000491974 APBA3O96018 575 aa21.68■■□□□ 1.06
SNHG28-202ENST00000491974 WWC1Q8IX03 1113 aa21.68■■□□□ 1.06
SNHG28-202ENST00000491974 UPF1Q92900 1129 aaKnown RBP eCLIP21.68■■□□□ 1.06
SNHG28-202ENST00000491974 CALD1Q05682 793 aaKnown RBP21.67■■□□□ 1.06
SNHG28-202ENST00000491974 BTBD11A6QL63 1104 aa21.65■■□□□ 1.06
SNHG28-202ENST00000491974 SMARCC1Q92922 1105 aaPredicted RBP21.65■■□□□ 1.06
SNHG28-202ENST00000491974 ATG3Q9NT62 314 aa21.65■■□□□ 1.06
SNHG28-202ENST00000491974 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms