RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 RAPGEF4Q8WZA2 1011 aa12.24□□□□□ -0.45
COL6A4P1-203ENST00000491915 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
COL6A4P1-203ENST00000491915 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
COL6A4P1-203ENST00000491915 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 CYP27B1O15528 508 aa12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 KCNQ4P56696 695 aa12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 KNSTRNQ9Y448 316 aa12.23□□□□□ -0.45
COL6A4P1-203ENST00000491915 SYTL4Q96C24 671 aaPredicted RBP12.22□□□□□ -0.45
COL6A4P1-203ENST00000491915 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
COL6A4P1-203ENST00000491915 RREB1Q92766 1687 aa12.22□□□□□ -0.45
COL6A4P1-203ENST00000491915 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
COL6A4P1-203ENST00000491915 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
COL6A4P1-203ENST00000491915 NSD2O96028 1365 aa12.19□□□□□ -0.46
COL6A4P1-203ENST00000491915 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
COL6A4P1-203ENST00000491915 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
COL6A4P1-203ENST00000491915 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 IL13P35225 146 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 MTHFSP49914 203 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 SPON1Q9HCB6 807 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
COL6A4P1-203ENST00000491915 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 BTAF1O14981 1849 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 PIGBQ92521 554 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
COL6A4P1-203ENST00000491915 PTGER2P43116 358 aa12.15□□□□□ -0.46
COL6A4P1-203ENST00000491915 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
COL6A4P1-203ENST00000491915 IGSF1Q8N6C5 1336 aa12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 PHKG2P15735 406 aa12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 RGPD3A6NKT7 1758 aaPredicted RBP12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 RGPD4Q7Z3J3 1758 aa12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 LRP5O75197 1615 aa12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
COL6A4P1-203ENST00000491915 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
COL6A4P1-203ENST00000491915 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
COL6A4P1-203ENST00000491915 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
COL6A4P1-203ENST00000491915 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
COL6A4P1-203ENST00000491915 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
COL6A4P1-203ENST00000491915 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
COL6A4P1-203ENST00000491915 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
COL6A4P1-203ENST00000491915 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
COL6A4P1-203ENST00000491915 SMIM5Q71RC9 77 aa12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
COL6A4P1-203ENST00000491915 HMOX1P09601 288 aa12.09□□□□□ -0.47
COL6A4P1-203ENST00000491915 ZNF530Q6P9A1 599 aaPredicted RBP12.09□□□□□ -0.47
COL6A4P1-203ENST00000491915 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
COL6A4P1-203ENST00000491915 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
COL6A4P1-203ENST00000491915 CASZ1Q86V15 1759 aa12.09□□□□□ -0.47
COL6A4P1-203ENST00000491915 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 TMOD3Q9NYL9 352 aa12.08□□□□□ -0.48
COL6A4P1-203ENST00000491915 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 SIK1P57059 783 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 ITPK1Q13572 414 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 ITGB4P16144 1822 aa12.07□□□□□ -0.48
COL6A4P1-203ENST00000491915 LY75O60449 1722 aa12.06□□□□□ -0.48
COL6A4P1-203ENST00000491915 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
COL6A4P1-203ENST00000491915 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
COL6A4P1-203ENST00000491915 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
COL6A4P1-203ENST00000491915 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
COL6A4P1-203ENST00000491915 KDRP35968 1356 aa12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 CABP4P57796 275 aa12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 ARXQ96QS3 562 aa12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 FHDC1Q9C0D6 1143 aaPredicted RBP12.05□□□□□ -0.48
COL6A4P1-203ENST00000491915 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
COL6A4P1-203ENST00000491915 MSH5O43196 834 aa12.04□□□□□ -0.48
COL6A4P1-203ENST00000491915 PPP2R1AP30153 589 aa12.04□□□□□ -0.48
COL6A4P1-203ENST00000491915 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
COL6A4P1-203ENST00000491915 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
COL6A4P1-203ENST00000491915 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms