RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 LTN1O94822 1766 aa19.89■□□□□ 0.77
ATG4B-222ENST00000491867 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-222ENST00000491867 LY75O60449 1722 aa19.88■□□□□ 0.77
ATG4B-222ENST00000491867 WWC3Q9ULE0 1092 aa19.88■□□□□ 0.77
ATG4B-222ENST00000491867 APLP1P51693 650 aa19.87■□□□□ 0.77
ATG4B-222ENST00000491867 DOT1LQ8TEK3 1739 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 USP47Q96K76 1375 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 DNAJC5GQ8N7S2 189 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 IP6K1Q92551 441 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
ATG4B-222ENST00000491867 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
ATG4B-222ENST00000491867 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
ATG4B-222ENST00000491867 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
ATG4B-222ENST00000491867 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
ATG4B-222ENST00000491867 PCNTO95613 3336 aa19.82■□□□□ 0.76
ATG4B-222ENST00000491867 CD163L1Q9NR16 1453 aa19.8■□□□□ 0.76
ATG4B-222ENST00000491867 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
ATG4B-222ENST00000491867 HDGFL2Q7Z4V5 671 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-222ENST00000491867 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
ATG4B-222ENST00000491867 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
ATG4B-222ENST00000491867 MEGF6O75095 1541 aa19.77■□□□□ 0.76
ATG4B-222ENST00000491867 TOMM70O94826 608 aa19.77■□□□□ 0.76
ATG4B-222ENST00000491867 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.76
ATG4B-222ENST00000491867 EDC4Q6P2E9 1401 aaKnown RBP19.76■□□□□ 0.75
ATG4B-222ENST00000491867 C5P01031 1676 aa19.76■□□□□ 0.75
ATG4B-222ENST00000491867 CAPN15O75808 1086 aa19.76■□□□□ 0.75
ATG4B-222ENST00000491867 COL13A1Q5TAT6 717 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-222ENST00000491867 AMIGO3Q86WK7 504 aa19.76■□□□□ 0.75
ATG4B-222ENST00000491867 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
ATG4B-222ENST00000491867 SMIM5Q71RC9 77 aa19.75■□□□□ 0.75
ATG4B-222ENST00000491867 PALLDQ8WX93 1383 aa19.74■□□□□ 0.75
ATG4B-222ENST00000491867 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
ATG4B-222ENST00000491867 HOXC9P31274 260 aa19.74■□□□□ 0.75
ATG4B-222ENST00000491867 AK7Q96M32 723 aa19.74■□□□□ 0.75
ATG4B-222ENST00000491867 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
ATG4B-222ENST00000491867 PHF14O94880 888 aa19.73■□□□□ 0.75
ATG4B-222ENST00000491867 AMPHP49418 695 aa19.73■□□□□ 0.75
ATG4B-222ENST00000491867 FBLN1P23142 703 aa19.72■□□□□ 0.75
ATG4B-222ENST00000491867 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
ATG4B-222ENST00000491867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
ATG4B-222ENST00000491867 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
ATG4B-222ENST00000491867 NMRK2Q9NPI5 230 aa19.71■□□□□ 0.75
ATG4B-222ENST00000491867 TAF1LQ8IZX4 1826 aa19.71■□□□□ 0.75
ATG4B-222ENST00000491867 A0A1W2PP64 1363 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 HTRA3P83110 453 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 NBPF6Q5VWK0 638 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 NBPF4Q96M43 638 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
ATG4B-222ENST00000491867 RAPGEF4Q8WZA2 1011 aa19.69■□□□□ 0.74
ATG4B-222ENST00000491867 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
ATG4B-222ENST00000491867 CICQ96RK0 1608 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-222ENST00000491867 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
ATG4B-222ENST00000491867 COG3Q96JB2 828 aa19.68■□□□□ 0.74
ATG4B-222ENST00000491867 JMYQ8N9B5 988 aa19.67■□□□□ 0.74
ATG4B-222ENST00000491867 SMARCC1Q92922 1105 aaPredicted RBP19.67■□□□□ 0.74
ATG4B-222ENST00000491867 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
ATG4B-222ENST00000491867 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-222ENST00000491867 TNS4Q8IZW8 715 aa19.66■□□□□ 0.74
ATG4B-222ENST00000491867 RBM46Q8TBY0 533 aaKnown RBP19.66■□□□□ 0.74
ATG4B-222ENST00000491867 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
ATG4B-222ENST00000491867 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 SSFA2P28290 1259 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 ARHGAP27Q6ZUM4 889 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 BCS1LQ9Y276 419 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
ATG4B-222ENST00000491867 PRELPP51888 382 aa19.64■□□□□ 0.73
ATG4B-222ENST00000491867 PXDNLA1KZ92 1463 aa19.64■□□□□ 0.73
ATG4B-222ENST00000491867 A0A0G2JLW4 131 aa19.63■□□□□ 0.73
ATG4B-222ENST00000491867 MMP10P09238 476 aa19.63■□□□□ 0.73
ATG4B-222ENST00000491867 C16orf71Q8IYS4 520 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-222ENST00000491867 LINC00116Q8NCU8 138 aa19.63■□□□□ 0.73
ATG4B-222ENST00000491867 CYP27B1O15528 508 aa19.62■□□□□ 0.73
ATG4B-222ENST00000491867 RRS1Q15050 365 aaKnown RBP19.62■□□□□ 0.73
ATG4B-222ENST00000491867 PIGBQ92521 554 aa19.62■□□□□ 0.73
ATG4B-222ENST00000491867 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
ATG4B-222ENST00000491867 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
ATG4B-222ENST00000491867 LOC102724428A0A0B4J2F2 783 aa19.6■□□□□ 0.73
ATG4B-222ENST00000491867 GNPATO15228 680 aa19.6■□□□□ 0.73
ATG4B-222ENST00000491867 SIK1P57059 783 aa19.6■□□□□ 0.73
ATG4B-222ENST00000491867 TGFB2P61812 414 aa19.6■□□□□ 0.73
ATG4B-222ENST00000491867 FSTL1Q12841 308 aa19.6■□□□□ 0.73
ATG4B-222ENST00000491867 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
ATG4B-222ENST00000491867 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
ATG4B-222ENST00000491867 FCHSD2O94868 740 aa19.58■□□□□ 0.72
ATG4B-222ENST00000491867 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
ATG4B-222ENST00000491867 C9orf131Q5VYM1 1079 aa19.58■□□□□ 0.72
ATG4B-222ENST00000491867 ITGB4P16144 1822 aa19.58■□□□□ 0.72
ATG4B-222ENST00000491867 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-222ENST00000491867 DPEP1P16444 411 aa19.57■□□□□ 0.72
ATG4B-222ENST00000491867 PUS7Q96PZ0 661 aaKnown RBP19.57■□□□□ 0.72
ATG4B-222ENST00000491867 ITPK1Q13572 414 aa19.56■□□□□ 0.72
ATG4B-222ENST00000491867 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
ATG4B-222ENST00000491867 KIF13BQ9NQT8 1826 aa19.55■□□□□ 0.72
ATG4B-222ENST00000491867 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
ATG4B-222ENST00000491867 C10orf71Q711Q0 1435 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms