RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
NUP50-217ENST00000491860 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
NUP50-217ENST00000491860 BTAF1O14981 1849 aa12.14□□□□□ -0.47
NUP50-217ENST00000491860 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
NUP50-217ENST00000491860 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NUP50-217ENST00000491860 INSRP06213 1382 aa12.13□□□□□ -0.47
NUP50-217ENST00000491860 FLT4P35916 1363 aa12.13□□□□□ -0.47
NUP50-217ENST00000491860 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
NUP50-217ENST00000491860 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
NUP50-217ENST00000491860 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
NUP50-217ENST00000491860 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
NUP50-217ENST00000491860 ARXQ96QS3 562 aa12.12□□□□□ -0.47
NUP50-217ENST00000491860 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
NUP50-217ENST00000491860 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
NUP50-217ENST00000491860 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP50-217ENST00000491860 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
NUP50-217ENST00000491860 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
NUP50-217ENST00000491860 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
NUP50-217ENST00000491860 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
NUP50-217ENST00000491860 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
NUP50-217ENST00000491860 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
NUP50-217ENST00000491860 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
NUP50-217ENST00000491860 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
NUP50-217ENST00000491860 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
NUP50-217ENST00000491860 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 MEGF6O75095 1541 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 CCER1Q8TC90 406 aaPredicted RBP12.07□□□□□ -0.48
NUP50-217ENST00000491860 DOT1LQ8TEK3 1739 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
NUP50-217ENST00000491860 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
NUP50-217ENST00000491860 NSD2O96028 1365 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
NUP50-217ENST00000491860 FBLN1P23142 703 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
NUP50-217ENST00000491860 GPR162Q16538 588 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 LY75O60449 1722 aa12.06□□□□□ -0.48
NUP50-217ENST00000491860 GOLGB1Q14789 3259 aaKnown RBP12.05□□□□□ -0.48
NUP50-217ENST00000491860 MAP2P11137 1827 aaKnown RBP12.05□□□□□ -0.48
NUP50-217ENST00000491860 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
NUP50-217ENST00000491860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUP50-217ENST00000491860 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
NUP50-217ENST00000491860 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
NUP50-217ENST00000491860 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 POLD1P28340 1107 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
NUP50-217ENST00000491860 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
NUP50-217ENST00000491860 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
NUP50-217ENST00000491860 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
NUP50-217ENST00000491860 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
NUP50-217ENST00000491860 HSPA5P11021 654 aaKnown RBP12.01□□□□□ -0.49
NUP50-217ENST00000491860 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
NUP50-217ENST00000491860 GRIN3BO60391 1043 aa12□□□□□ -0.49
NUP50-217ENST00000491860 POLKQ9UBT6 870 aa12□□□□□ -0.49
NUP50-217ENST00000491860 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
NUP50-217ENST00000491860 PANK3Q9H999 370 aa11.99□□□□□ -0.49
NUP50-217ENST00000491860 ITGB4P16144 1822 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 C5P01031 1676 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 CYP27B1O15528 508 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 EYA1Q99502 592 aa11.98□□□□□ -0.49
NUP50-217ENST00000491860 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
NUP50-217ENST00000491860 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
NUP50-217ENST00000491860 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
NUP50-217ENST00000491860 TAF1LQ8IZX4 1826 aa11.96□□□□□ -0.49
NUP50-217ENST00000491860 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP50-217ENST00000491860 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
NUP50-217ENST00000491860 TNNT2P45379 298 aaPredicted RBP11.95□□□□□ -0.5
NUP50-217ENST00000491860 EIF4A2Q14240 407 aaKnown RBP11.95□□□□□ -0.5
NUP50-217ENST00000491860 MORC1Q86VD1 984 aa11.95□□□□□ -0.5
NUP50-217ENST00000491860 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
NUP50-217ENST00000491860 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
NUP50-217ENST00000491860 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
NUP50-217ENST00000491860 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 ADCY9O60503 1353 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 MSH5O43196 834 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 PHKG2P15735 406 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
NUP50-217ENST00000491860 AK7Q96M32 723 aa11.94□□□□□ -0.5
NUP50-217ENST00000491860 ERVV-2B6SEH9 535 aa11.93□□□□□ -0.5
NUP50-217ENST00000491860 PIGBQ92521 554 aa11.93□□□□□ -0.5
NUP50-217ENST00000491860 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
NUP50-217ENST00000491860 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
NUP50-217ENST00000491860 KCNQ4P56696 695 aa11.92□□□□□ -0.5
NUP50-217ENST00000491860 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
NUP50-217ENST00000491860 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms