RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 AMPHP49418 695 aa15.35■□□□□ 0.05
TMEM39A-211ENST00000491685 NSD2O96028 1365 aa15.35■□□□□ 0.05
TMEM39A-211ENST00000491685 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 PTGER2P43116 358 aa15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 SLC15A2Q16348 729 aa15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 STK32BQ9NY57 414 aa15.34■□□□□ 0.05
TMEM39A-211ENST00000491685 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.05
TMEM39A-211ENST00000491685 ZNF827Q17R98 1081 aa15.33■□□□□ 0.04
TMEM39A-211ENST00000491685 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
TMEM39A-211ENST00000491685 LRRC4BQ9NT99 713 aa15.33■□□□□ 0.04
TMEM39A-211ENST00000491685 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
TMEM39A-211ENST00000491685 PKD1L3Q7Z443 1732 aa15.33■□□□□ 0.04
TMEM39A-211ENST00000491685 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
TMEM39A-211ENST00000491685 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
TMEM39A-211ENST00000491685 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
TMEM39A-211ENST00000491685 ITGB4P16144 1822 aa15.31■□□□□ 0.04
TMEM39A-211ENST00000491685 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
TMEM39A-211ENST00000491685 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
TMEM39A-211ENST00000491685 C5P01031 1676 aa15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 INSRP06213 1382 aa15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 FLT4P35916 1363 aa15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 KCNQ4P56696 695 aa15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 FHDC1Q9C0D6 1143 aaPredicted RBP15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
TMEM39A-211ENST00000491685 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 C1QTNF8P60827 252 aa15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
TMEM39A-211ENST00000491685 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
TMEM39A-211ENST00000491685 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
TMEM39A-211ENST00000491685 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
TMEM39A-211ENST00000491685 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
TMEM39A-211ENST00000491685 MTFR1LQ9H019 292 aa15.26■□□□□ 0.03
TMEM39A-211ENST00000491685 KIF24Q5T7B8 1368 aa15.25■□□□□ 0.03
TMEM39A-211ENST00000491685 EIF4G2P78344 907 aaKnown RBP eCLIP15.25■□□□□ 0.03
TMEM39A-211ENST00000491685 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
TMEM39A-211ENST00000491685 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
TMEM39A-211ENST00000491685 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
TMEM39A-211ENST00000491685 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
TMEM39A-211ENST00000491685 SLC27A3Q5K4L6 730 aa15.22■□□□□ 0.03
TMEM39A-211ENST00000491685 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
TMEM39A-211ENST00000491685 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.03
TMEM39A-211ENST00000491685 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
TMEM39A-211ENST00000491685 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.03
TMEM39A-211ENST00000491685 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
TMEM39A-211ENST00000491685 CYP27B1O15528 508 aa15.2■□□□□ 0.02
TMEM39A-211ENST00000491685 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
TMEM39A-211ENST00000491685 ARXQ96QS3 562 aa15.2■□□□□ 0.02
TMEM39A-211ENST00000491685 C4BP0C0L5 1744 aa15.2■□□□□ 0.02
TMEM39A-211ENST00000491685 CEP350Q5VT06 3117 aa15.19■□□□□ 0.02
TMEM39A-211ENST00000491685 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
TMEM39A-211ENST00000491685 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
TMEM39A-211ENST00000491685 GOLGB1Q14789 3259 aaKnown RBP15.18■□□□□ 0.02
TMEM39A-211ENST00000491685 POLKQ9UBT6 870 aa15.18■□□□□ 0.02
TMEM39A-211ENST00000491685 WASHC2AQ641Q2 1341 aa15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 EYA1Q99502 592 aa15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
TMEM39A-211ENST00000491685 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
TMEM39A-211ENST00000491685 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
TMEM39A-211ENST00000491685 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
TMEM39A-211ENST00000491685 PANK3Q9H999 370 aa15.14■□□□□ 0.01
TMEM39A-211ENST00000491685 GPR162Q16538 588 aa15.13■□□□□ 0.01
TMEM39A-211ENST00000491685 AMIGO3Q86WK7 504 aa15.13■□□□□ 0.01
TMEM39A-211ENST00000491685 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
TMEM39A-211ENST00000491685 SLC16A10Q8TF71 515 aa15.13■□□□□ 0.01
TMEM39A-211ENST00000491685 PIGBQ92521 554 aa15.12■□□□□ 0.01
TMEM39A-211ENST00000491685 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
TMEM39A-211ENST00000491685 MSH5O43196 834 aa15.1■□□□□ 0.01
TMEM39A-211ENST00000491685 HMGB2P26583 209 aaKnown RBP15.1■□□□□ 0.01
TMEM39A-211ENST00000491685 POLD1P28340 1107 aa15.1■□□□□ 0.01
TMEM39A-211ENST00000491685 SPG7Q9UQ90 795 aa15.1■□□□□ 0.01
TMEM39A-211ENST00000491685 IGSF1Q8N6C5 1336 aa15.1■□□□□ 0.01
TMEM39A-211ENST00000491685 PHKG2P15735 406 aa15.09■□□□□ 0.01
TMEM39A-211ENST00000491685 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0
TMEM39A-211ENST00000491685 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0
TMEM39A-211ENST00000491685 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
TMEM39A-211ENST00000491685 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
TMEM39A-211ENST00000491685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 02e-6■■□□□ 11.9
TMEM39A-211ENST00000491685 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
TMEM39A-211ENST00000491685 KDRP35968 1356 aa15.07■□□□□ 0
TMEM39A-211ENST00000491685 C4AP0C0L4 1744 aa15.06■□□□□ 0
TMEM39A-211ENST00000491685 ITPK1Q13572 414 aa15.06■□□□□ 0
TMEM39A-211ENST00000491685 AEBP1Q8IUX7 1158 aa15.06■□□□□ 0
TMEM39A-211ENST00000491685 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
TMEM39A-211ENST00000491685 SMARCC1Q92922 1105 aaPredicted RBP15.06■□□□□ 0
TMEM39A-211ENST00000491685 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms